Lars Hestbjerg Hansen
Professor
Microbial Ecology and Biotechnology
Thorvaldsensvej 40
1871 Frederiksberg C
- 1995
- Published
Development and testing of improved suicide functions for biological containment of bacteria
Knudsen, S., Saadbye, P., Hansen, Lars Hestbjerg, Collier, A., Jacobsen, B. L., Schlundt, J. & Karlström, O. H., 1995, In: Applied and Environmental Microbiology. 61, 3, p. 985-991 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 1997
- Published
Chromosomal insertion of the entire Escherichia coli lactose operon, into two strains of Pseudomonas, using a modified mini-Tn5 delivery system
Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Jensen, L. B., 1997, In: Gene. 186, 2, p. 167-173Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of GH receptor tyrosine phosphorylation in Stat5 activation
Hansen, J. A., Hansen, Lars Hestbjerg, Wang, X., Kopchick, J. J., Gouilleux, F., Groner, B., Møldrup, A., Galsgaard, E. D., Nielsen, Jens Høiriis & Billestrup, Nils, Jun 1997, In: Journal of Molecular Endocrinology. 18, 3, p. 213-21 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 1998
- Published
The effect of the lacY gene on the induction of IPTG inducible promoters, studied in Escherichia coli and Pseudomonas fluorescens
Hansen, Lars Hestbjerg, Knudsen, S. & Sørensen, Søren Johannes, 1998, In: Current Microbiology. 36, 6, p. 341-347Research output: Contribution to journal › Journal article › Research › peer-review
- 2000
- Published
Detection and quantification of tetracyclines by whole cell biosensors
Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 190, 2, p. 273-278Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Versatile biosensor vectors for detection and quantification of mercury
Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 193, 1, p. 123-127Research output: Contribution to journal › Journal article › Research › peer-review
- 2001
- Published
Detection of Oxytetracycline production by Streptomyces rimosus in soil microcosms by combining whole-cell biosensors and flow cytometry
Hansen, Lars Hestbjerg, Ferrari, B., Sørensen, A. H., Veal, D. & Sørensen, Søren Johannes, 2001, In: Applied and Environmental Microbiology. 67, 1, p. 239-244Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Group-specific PCR primers to amplify 24S α-subunit rRNA genes from Kinetoplastida (Protozoa) used in denaturing gradient gel electrophoresis
Rasmussen, L. D., Ekelund, Flemming, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Johnsen, K., 2001, In: Microbial Ecology. 42, 2, p. 109-115Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The use of whole-cell biosensors to detect and quantify compounds or conditions affecting biological systems
Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2001, In: Microbial Ecology. 42, 4, p. 483-494Research output: Contribution to journal › Journal article › Research › peer-review
- 2002
- Published
Molecular methods for assessing and manipulating the diversity of microbial populations and processes
Sørensen, Søren Johannes, de Lipthay, J. R., Müller, A. K., Barkay, T., Hansen, Lars Hestbjerg & Rasmussen, L. D., 2002, Enzymes in the Environment: Activity, Ecology, and Applications. Burns, R. G. & Dick, R. P. (eds.). Marcel Dekker, 363 p. (Books in soils, plants, and the environment).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Quantification of bioavailable chlortetracycline in pig feces using a bacterial whole-cell biosensor
Hansen, Lars Hestbjerg, Aarestrup, F. & Sørensen, Søren Johannes, 2002, In: Veterinary Microbiology. 87, 1, p. 51-57Research output: Contribution to journal › Journal article › Research › peer-review
- 2003
- Published
Conjugative Plasmid Conferring Resistance to Olaquindox
Sørensen, A. H., Hansen, Lars Hestbjerg, Johannesen, E. & Sørensen, Søren Johannes, 2003, In: Antimicrobial agents and Chemotheraphy. 47, 2, p. 798-799 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Direct Detection and Quantification of Horizontal Gene Transfer Using Flow Cytometry and gfp as a Reporter Gene
Sørensen, Søren Johannes, Sørensen, A. H., Hansen, Lars Hestbjerg, Oregaard, G. & Veal, D., 2003, In: Current Microbiology. 47, 2, p. 129-133 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
In Situ Exposure to Low Herbicide Concentrations Affects Microbial Population Composition and Catabolic Gene Frequency in an Aerobic Shallow Aquifer
de Lipthay, J. R., Tuxen, N., Johnsen, K., Hansen, Lars Hestbjerg, Albrechtsen, H., Bjerg, P. L. & Aamand, J., 2003, In: Applied and Environmental Microbiology. 69, 1, p. 461-467 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Presence of N-acyl Homoserine Lactones in Soil Detected by a Whole-Cell Biosensor and Flow Cytometry
Burmølle, Mette, Hansen, Lars Hestbjerg, Oregaard, G. & Sørensen, Søren Johannes, 2003, In: Microbial Ecology. 45, 3, p. 226-236 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2004
- Published
In Vivo Detection and Quantification of Tetracycline by Use of a Whole-Cell Biosensor in the Rat Intestine
Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. R. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 4, p. 1112-1117Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of whole-cell biosensors in soil
Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Burmølle, Mette, Oregaard, G. & Hermansen, P., 2004, Molecular Microbial Ecology Manual. Kowalchuk, G. A., de Bruijn, F. J., Head, I. M., Akkermans, A. D. L. & van Elsas, J. D. (eds.). 2. ed ed. Kluwer Academic Publishers, p. 1613-1628 8.03Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Effect of Tetracycline on Transfer and Establishment of the Tetracycline-Inducible Conjugative Transposon Tn916 in the Guts of Gnotobiotic Rats
Bahl, M. I., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Licht, T. R., 2004, In: Applied and Environmental Microbiology. 70, 2, p. 758-764Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasmid Encoded Multidrug Efflux Pump Conferring Resistance to Olaquindox in Escherichia coli
Hansen, Lars Hestbjerg, Johannesen, E., Burmølle, Mette, Sørensen, A. H. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 9, p. 3332-3337Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification of plasmid loss in Escherichia coli cells by use of flow cytometry
Bahl, M. I., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2004, In: FEMS Microbiology Letters. 232, 1, p. 45-49Research output: Contribution to journal › Journal article › Research › peer-review
- 2005
- Published
Construction of a ColD cda Promoter-Based SOS-Green Fluorescent Protein Whole-Cell Biosensor with Higher Sensitivity toward Genotoxic Compounds than Constructs Based on recA, umuDC, or sulA Promoters
Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: Applied and Environmental Microbiology. 71, 5, p. 2338-2346Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Construction of an extended range whole-cell tetracycline biosensor by use of the tet(M) resistance gene
Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: FEMS Microbiology Letters. 253, 2, p. 201-205Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Studying plasmid horizontal transfer in situ: a critical review
Sørensen, Søren Johannes, Bailey, M., Hansen, Lars Hestbjerg, Kroer, Niels & Wuertz, S., 2005, In: Nature Reviews. Microbiology. 3, 9, p. 700-710Research output: Contribution to journal › Review › Research
- Published
The Prevalence of the OqxAB Multidrug Efflux Pump amongst Olaquindox-Resistant Escherichia coli in Pigs
Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Jørgensen, H. S. & Jensen, L. B., 2005, In: Microbial Drug Resistance. 11, 4, p. 378-382Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Use of a Whole-Cell Biosensor and Flow Cytometry to Detect AHL Production by an Indigenous Soil Community During Decomposition
Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: Microbial Ecology. 50, 2, p. 221-229Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
- Published
A flow cytometry-optimized assay using an SOS-green fluorescent protein (SOS-GFP) whole-cell biosensor for the detection of genotoxins in complex environments
Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, In: Mutation Research - Reviews. 603, 2, p. 164-172 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biosensors to Monitor Soil Health or Toxicity
Poulsen, P. H., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, Modern Soil Microbiology. van Elsas, J. D., Jansson, J. K. & Trevors, J. T. (eds.). 2nd ed. Boca Raton, FL: CRC Press, p. 435-454Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Determination of the genetic background for resistance to olaquindox, a Gram-negative growth promoter
Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Jensen, L. B., 2006, In: DANMAP 2005 - July 2006. p. 100-100 1 p.Research output: Contribution to journal › Journal article › Research
- Published
Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms
Burmølle, Mette, Webb, J. S., Rao, D., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Kjelleberg, S., 2006, In: Applied and Environmental Microbiology. 72, 6, p. 3916-3923Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic labelling and application of the isoproturonmineralizing Sphingomonas sp. strain SRS2 in soil and rhizosphere
Kristensen, K. E., Jacobsen, C. S., Hansen, Lars Hestbjerg, Aamand, J., Morgan, J. A. W., Sternberg, C. & Sørensen, S. R., 2006, In: Letters in Applied Microbiology. 43, 3, p. 280-286 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Making bio-sense of toxicity: new developments in whole-cell biosencors
Sørensen, Søren Johannes, Burmølle, Mette & Hansen, Lars Hestbjerg, 2006, In: Current Opinion in Biotechnology. 17, 1, p. 11-16Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reporter Geneechnology in Soil Ecology; Detection of Bioavailability and Microbial Interactions
Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2006, Nucleic Acids and Proteins in Soil. Tyskland: Springer, p. 397-419Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- 2007
- Published
Conjugative transfer facilitates stable maintenance of IncP-1 plasmid pKJK5 in Escherichia coli cells colonizing the gastrointestinal tract of the germfree rat
Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. & Sørensen, Søren Johannes, 2007, In: Applied and Environmental Microbiology. 73, 1, p. 341-343Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Establishment and early succession of a multispecies biofilm composed of soil bacteria
Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2007, In: Microbial Ecology. 54, 2, p. 352-62 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of conjugal transfer on the stability of IncP-1 plasmid pKJK5 in bacterial populations
Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2007, In: FEMS Microbiology Letters. 266, p. 250-256Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Substrate specificity of the OqxAB multidrug resistance pump in Escherichia coli and selected enteric bacteria
Hansen, Lars Hestbjerg, Jensen, L. B., Sørensen, H. I. & Sørensen, Søren Johannes, 2007, In: Journal of Antimicrobial Chemotherapy. 60, 1, p. 145-147Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The cda GenoTox assay: A new sensitive method for detection of environmental genotoxins, including nitroarenes and aromatic amines
Østergaard, T. G., Hansen, Lars Hestbjerg, Binderup, M., Norman, A. & Sørensen, Søren Johannes, 2007, In: Mutation Research - Reviews. 631, 2, p. 77-84Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The multiple antibiotic resistance IncP-1 plasmid pKJK5 isolated from a soil environment is phylogenetically divergent from members of the previously established a, ß and d sub-groups
Bahl, M. I., Hansen, Lars Hestbjerg, Goesmann, A. & Sørensen, Søren Johannes, 2007, In: Plasmid. 58, 1, p. 31-43Research output: Contribution to journal › Journal article › Research › peer-review
- 2008
- Published
Characterisation, dissemination and persistence of gentamicin resistant Escherichia coli from a Danish university hospital to the waste water environment
Jakobsen, L., Sandvang, D., Hansen, Lars Hestbjerg, Bagger-Skjøt, L., Westh, Henrik T., Jørgensen, C., Hansen, D. S., Pedersen, B. M., Monnet, D. L., Frimodt-Møller, N., Sørensen, Søren Johannes & Hammerum, A. M., 2008, In: Environment International. 34, 1, p. 108-15 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux
Norman, A., Hansen, Lars Hestbjerg, She, Q. & Sørensen, Søren Johannes, 2008, In: Plasmid. 60, 1, p. 59-74 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Type 3 fimbriae, encoded by the conjugative plasmid pOLA52, enhance biofilm formation and transfer frequencies in Enterobacteriaceae strains
Burmølle, Mette, Bahl, M. I., Jensen, L. B., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2008, In: Microbiology. 154, Pt 1, p. 187-95 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Zackenberg Basic: The BioBasic programme
Hansen, J., Hansen, Lars Hestbjerg, Tamstrof, M., Christoffersen, Kirsten Seestern, Jeppesen, E. & Schmidt, N. M., 2008, Zackenberg Ecological Research Operations, 13th Annual Report 2007: Danish Polar Center 2008, Danish Agency for Science, Technology and Innovation, Ministry of Science, Technology and Innovation. Klitgaard, A. B. & Rasch, M. (eds.). Copenhagen: Danish Polar Center, p. 57-69Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Communication
- 2009
- Published
All IncP-1 plasmid subgroups, including the novel e subgroup, are prevalent in the influent of a Danish wastewater treatment plant
Bahl, M. I., Burmølle, Mette, Meisner, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Plasmid. 62, 2, p. 134-139 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of genetic determinants of extended-spectrum cephalosporinases (ESCs) in Escherichia coli isolates from Danish and imported poultry meat
Bergenholtz, R. D., Jørgensen, M. S., Hansen, Lars Hestbjerg, Jensen, L. B. & Hasman, H., 2009, In: Journal of Antimicrobial Chemotherapy. 64, 1, p. 207-209 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conjugative plasmids: Vessels of the communal gene pool
Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Philosophical Transactions of the Royal Society of London. Biological Sciences. 364, 1527, p. 2275-2289 15 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Construction and Use of Flow Cytometry Optimized Plasmid-Sensor Strains: Genomes in Flux
Bahl, M. I., Oregaard, G., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2009, Horizontal Gene Transfer. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 257-268 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing
Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2009. 1 p.Research output: Contribution to conference › Poster › Research
- Published
Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing
Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Persistence Mechanisms of Conjugative Plasmids
Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, Horizontal Gene Transfer: Genomes in Flux. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 73-102 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
The presence of embedded bacterial pure cultures in agar plates stimulate the culturability of soil bacteria.
Burmølle, Mette, Johnsen, K., Abu Al-Soud, W. M. A. F., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Journal of Microbiological Methods. 79, 2, p. 166-173 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2010
- Published
Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability
Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.Research output: Contribution to conference › Poster › Research
- Published
Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
Larsen, Nadja, Vogensen, Finn Kvist, van der Berg, Franciscus Winfried J, Nielsen, Dennis Sandris, Andreasen, Anne Sofie, Pedersen, Bente Klarlund, Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010, In: PLoS ONE. 5, 2, p. e9085 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
Nielsen, Dennis Sandris, Larsen, Nadja, Vogensen, Finn Kvist, van den Berg, F. W. J., Andreasen, A. S., Pedersen, B. K., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The lactic acid bacterium, Carnobacterium maltaromaticum possess a diverse range of potential virulence genes some of which are related to similar genes in Listeria monocytogenes
Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Ingmer, Hanne, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.Research output: Contribution to conference › Poster › Research
- Published
The nitrogenase gene pool in surface waters of the global ocean is dominated by genes of non-cyanobacteria
Farnelid, H., Andersson, A., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Hagström & Riemann, Lasse, 2010.Research output: Contribution to conference › Poster › Research
- Published
- Published
Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing
Holmsgaard, P. N., Poulsen, P. H. B., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
Metamobilomics - Expanding the environmental mobilome with high throughput sequencing
Norman, A., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
The Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Field Trial
Li, L., Bergmark, L., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
The effect of L. acidophilus NCFM intake on insulin sensitivity and gut microbiota: a randomized placebo-controlled trial
Larsen, Nadja, Andreasen, A. S., Pedersen-Skovsgaard, T., Møller, K., van den Berg, F. W. J., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Pedersen, Bente Klarlund & Jakobsen, M., Sep 2010.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing
Holmsgaard, P. N., Poulsen, P., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Nov 2010.Research output: Contribution to conference › Poster › Research
- Published
Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Filed Trial
Li, L., Bergmark, L., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Norman, A. & Sørensen, Søren Johannes, Nov 2010.Research output: Contribution to conference › Poster › Research
- 2011
- Published
An Unexpected Location of the Arginine Catabolic Mobile Element (ACME) in a USA300-Related MRSA Strain
Bartels, Mette Damkjær, Hansen, Lars Hestbjerg, Boye, K., Sørensen, Søren Johannes & Westh, Henrik T., 2011, In: P L o S One. 6, 1, 5 p., e16193.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Fluoroquinolone resistance mechanisms in urinary tract pathogenic Escherichia coli isolated during rapidly increasing fluoroquinolone consumption in a low-use country
Christiansen, N., Nielsen, L., Jakobsen, L., Stegger, M., Hansen, Lars Hestbjerg & Frimodt-Moller, N., 2011, In: Microbial Drug Resistance. 17, 3, p. 395-406 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of diversity of plasmids carrying the blaTEM-52 gene
Bielak, E. M., Bergenholtz, R. D., Jørgensen, M. S., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Hasman, H., 2011, In: Journal of Antimicrobial Chemotherapy. 66, 11, p. 2465-74 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability
Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.Research output: Contribution to conference › Poster › Research › peer-review
- Published
Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria
Farnelid, H., Andersson, A. F., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Steward, G. F., Hagström, Å. & Riemann, Lasse, 2011, In: P L o S One. 6, 4, p. e19223 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp.lactis Bi-07
Larsen, Nadja, Vogensen, Finn Kvist, Gøbel, R. J., Michaelsen, Kim F., Abu Al-Soud, W., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2011, In: FEMS Microbiology Ecology. 75, 3, p. 482-496 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Poster › Research
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
- Published
Design and Synthesis of a Quintessential Self-Transmissible IncX1 Plasmid, pX1.0
Hansen, Lars Hestbjerg, Bentzon-Tilia, M., Bentzon-Tilia, S., Norman, A., Rafty, L. & Sørensen, Søren Johannes, May 2011, In: P L o S One. 6, 5, 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bias in bacterial diversity as a result of Nycodenz extraction from bulk soil
Holmsgaard, P. N., Norman, A., Hede, S. C., Poulsen, P. H. B., Al-Soud, W. A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 14 Jul 2011, In: Soil Biology & Biochemistry. 43, 10, p. 2152-2159 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation
Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.Research output: Contribution to conference › Poster › Research
- 2012
- Published
454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities
Lekberg, K. Y. M., Schnoor, T., Kjøller, Rasmus, Gibbons, S. M., Hansen, Lars Hestbjerg, Abu Al-Soud, W., Sørensen, Søren Johannes & Rosendahl, Søren, 2012, In: Journal of Ecology. 100, 1, p. 151-160 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessment of the specificity of Burkholderia and Pseudomonas qPCR assays for detection of these genera in soil using 454 pyrosequencing
Bergmark, L., Poulsen, P. H. B., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Microbiology Letters. 333, 1, p. 77-84 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse
Hansen, Camilla Hartmann Friis, Krych, Lukasz, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Buschard, K. & Hansen, Axel Kornerup, 2012, In: Diabetologia. 55, 8, p. 2285-2294 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae
Johnson, T. J., Bielak, E. M., Fortini, D., Hansen, Lars Hestbjerg, Hasman, H., Debroy, C., Nolan, L. K. & Carattoli, A., 2012, In: Plasmid. 68, 1, p. 43-50 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fitness cost: a bacteriological explanation for the demise of the first international methicillin-resistant Staphylococcus aureus epidemic
Nielsen, K. L., Pedersen, T. M., Udekwu, K. I., Petersen, A., Skov, R. L., Hansen, Lars Hestbjerg, Hughes, D. & Frimodt-Moller, N., 2012, In: Journal of Antimicrobial Chemotherapy. 67, 6, p. 1325-1332 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse
Bendtsen, K. M. B., Krych, Lukasz, Sørensen, Dorte Bratbo, Pang, W., Nielsen, Dennis Sandris, Josefsen, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 10, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insight from the draft genome of Dietzia cinnamea P4 reveals mechanisms of survival in complex tropical soil habitats and biotechnology potential
Procópio, L., Alvarez, V. M., Jurelevicius, D. A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Cardoso, J. S., Pádula, M., Leitao, Á. C., Seldin, L. & van Elsas, J. D., 2012, In: Antonie van Leeuwenhoek: Journal of Microbiology. 101, 2, p. 289-302 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Metamobilomics — expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing
Li, L., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: Clinical Microbiology and Infection. 18, Suppl. 4, p. 8-11 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel and conserved bacterial mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine
Kroer, Niels, Møller, A., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- Published
Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure
Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae
Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The interconnection between biofilm formation and horizontal gene transfer
Madsen, Jonas Stenløkke, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Immunology and Medical Microbiology. 65, 2, p. 183-195 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility
Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- 2013
Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans
Dolejska, M., Ville, L., Hasman, H., Hansen, Lars Hestbjerg & Carattoli, A., 2013, (E-pub ahead of print) In: Journal of Antimicrobial Chemotherapy. 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete genome sequence of Staphylococcus aureus strain M1, a unique t024-ST8-IVa Danish methicillin-resistant S. aureus clone
Larner-Svensson, H., Worning, P., Bartels, Mette Damkjær, Hansen, Lars Hestbjerg, Boye, K. & Westh, H., 2013, In: Genome Announcements. 1, 3, 2 p., e00336-13.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of fertilization with urban and agricultural organic wastes in a field trial – Prokaryotic diversity investigated by pyrosequencing
Poulsen, P. H. B., Abu Al-Soud, W., Bergmark, L., Magid, Jakob, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2013, In: Soil Biology & Biochemistry. 57, p. 784-893 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigating the diversity of Pseudomonas spp. in soil using culture dependent and independent techniques
Li, L., Abu Al-Soud, W., Bergmark, L., Riber, Leise, Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2013, In: Current Microbiology. 67, 4, p. 423-430 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of the relationship between lactococcal host cell wall polysaccharide genotype and 936 phage receptor binding protein phylogeny
Mahony, J., Kot, Witold, Murphy, J., Ainsworth, S., Neve, H., Hansen, Lars Hestbjerg, Heller, K. J., Sørensen, Søren Johannes, Hammer, K., Cambillau, C., Vogensen, Finn Kvist & Sinderen, D. V., 2013, In: Applied and Environmental Microbiology. 79, 14, p. 4385-4392 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Large cryoconite aggregates on a Svalbard glacier support a diverse microbial community including ammonia-oxidizing archaea
Zarsky, J. D., Stibal, M., Hodson, A., Sattler, B., Schostag, M., Hansen, Lars Hestbjerg, Jacobsen, C. S. & Psenner, R., 2013, In: Environmental Research Letters. 8, 3, 11 p., 035044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel insight into the genetic context of the cadAB genes from a 4-chloro-2-methylphenoxyacetic acid-degrading Sphingomonas
Nielsen, Tue Kjærgaard, Xu, Z., Gozdereliler, E., Aamand, J., Hansen, Lars Hestbjerg & Sørensen, S. R., 2013, In: P L o S One. 8, 12, 9 p., e83346.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simultaneous pyrosequencing of the 16S rRNA, IncP-1 trfA, and merA genes
Holmsgaard, P. N., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2013, In: Journal of Microbiological Methods. 95, 2, p. 280-284 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specificity and stability of the Acromyrmex–Pseudonocardia symbiosis
Andersen, Sandra Breum, Hansen, Lars Hestbjerg, Sapountzis, P., Sørensen, Søren Johannes & Boomsma, Jacobus J., 2013, In: Molecular Ecology. 22, 16, p. 4307-4321 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of the conjugative IncP-1 plasmid pKJK5 on multispecies biofilm formation is dependent on the plasmid host
Røder, Henriette Lyng, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Burmølle, Mette, 2013, In: F E M S Microbiology Letters. 344, 2, p. 186-192 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The murine lung microbiome in relation to the intestinal and vaginal bacterial communities
Barfod, K. K., Roggenbuck, M., Hansen, Lars Hestbjerg, Schjørring, S., Larsen, S. T., Sørensen, Søren Johannes & Krogfelt, K. A., 2013, In: B M C Microbiology. 13, 12 p., 303.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete nucleotide sequence of the self-transmissible TOL plasmid pD2RT provides new insight into arrangement of toluene catabolic plasmids
Jutkina, J., Hansen, Lars Hestbjerg, Li, L., Heinaru, E., Vedler, E., Joesaar, M. & Heinaru, A., Jan 2013, In: Plasmid. 70, 3, p. 393-405 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2014
- Published
A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice
Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K., Metzdorff, S. B., Nellemann, C. L., Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Frøkiær, Hanne, Skov, Søren & Hansen, Axel Kornerup, 2014, In: Diabetes. 63, 8, p. 2821-2832 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An improved method for including upper size range plasmids in metamobilomes
Norman, A., Riber, Leise, Luo, W., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2014, In: PLoS ONE. 9, 8, 12 p., e104405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioinformatic approaches reveal metagenomic characterization of soil microbial community
Xu, Z., Hansen, M. A., Hansen, Lars Hestbjerg, Jacquiod, S. J. A. & Sørensen, Søren Johannes, 2014, In: P L o S One. 9, 4, 11 p., e93445.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters
Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combined use of Bacteriophage K and a novel Bacteriophage to reduce Staphylococcus aureus biofilm formation
Alves, D. R., Gaudion, A., Bean, J. E., Esteban, P. P., Arnot, T. C., Harper, D. R., Kot, Witold, Hansen, Lars Hestbjerg, Enright, M. C. & Jenkins, A. T. A., 2014, In: Applied and Environmental Microbiology. 80, 21, p. 6694-6703 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DPS - a rapid method for genome sequencing of DNA-containing bacteriophages directly from a single plaque
Kot, Witold, Vogensen, Finn Kvist, Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2014, In: Journal of Virological Methods. 196, p. 152-156 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance
Riber, Leise, Poulsen, P. H. B., Abu Al-Soud, W., Hansen, L. B. S., Bergmark, L., Brejnrod, A. D., Norman, A., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 206-224 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-resolution melt analysis for rapid comparison of bacterial community compositions
Hjelmsø, M. H., Hansen, Lars Hestbjerg, Bælum, J., Feld, L., Holben, W. E. & Jacobsen, C. S., 2014, In: Applied and Environmental Microbiology. 80, 12, p. 3568-3575 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identifying the core microbial community in the gut of fungus-growing termites
Otani, S., Mikaelyan, A., Nobre, T., Hansen, Lars Hestbjerg, Koné, N. A., Sørensen, Søren Johannes, Aanen, D. K., Boomsma, Jacobus J., Brune, A. & Poulsen, Michael, 2014, In: Molecular Ecology. 23, 18, p. 4631–4644 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine
Møller, A. K., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Boyd, E. S. & Kroer, Niels, 2014, In: FEMS Microbiology Ecology. 87, 1, p. 52-63 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice
Hansen, Camilla Hartmann Friis, Andersen, L. S. F., Krych, Lukasz, Metzdorff, S. B., Hasselby, Jane Preuss, Skov, Søren, Nielsen, Dennis Sandris, Buschard, K., Hansen, Lars Hestbjerg & Hansen, Axel Kornerup, 2014, In: Journal of Immunology. 193, 3, p. 1213-1222 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pathogens and host immunity in the ancient human oral cavity
Warinner, C., Rodrigues, J. F. M., Vyas, R., Trachsel, C., Shved, N., Grossmann, J., Radini, A., Hancock, Y., Tito, R. Y., Fiddyment, S., Speller, C., Hendy, J., Charlton, S., Luder, H. U., Salazar-García, D. C., Eppler, E., Seiler, R., Hansen, L. H., Samaniego Castruita, J. A., Barkow-Oesterreicher, S. & 12 others, , 2014, In: Nature Genetics. 46, p. 336-344 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predictors of neutrophilic airway inflammation in young smokers with asthma
Westergaard, C. G., Munck, C., Petersen, Jens Helby, Porsbjerg, Celeste Michala, Hansen, Lars Hestbjerg & Backer, Vibeke, 2014, In: Journal of Asthma. 51, 4, p. 341-347 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Jacobsen, S., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2014, In: International Journal of Food Microbiology. 176, p. 29-37 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year
Dealtry, S., Holmsgaard, P. N., Dunon, V., Jechalke, S., Ding, G., Kroegerrecklenfort, E., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Zuehlke, S., Sørensen, Søren Johannes & Smalla, K., 2014, In: Applied and Environmental Microbiology. 80, 13, p. 4012-4020 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
Acromyrmex leaf-cutting ants have simple gut microbiota with nitrogen-fixing potential
Sapountzis, P., Zhukova, M., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Schiøtt, M. & Boomsma, Jacobus J., 2015, In: Applied and Environmental Microbiology. 81, 16, p. 5527-5537 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial symbiont sharing in Megalomyrmex social parasites and their fungus-growing ant hosts
Liberti, J., Sapountzis, P., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Adams, R. M. M. & Boomsma, Jacobus J., 2015, In: Molecular Ecology. 24, 12, p. 3151-3169 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community
Klümper, U., Riber, Leise, Dechesne, A., Sannazzaro, A. I., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Smets, B. F., 2015, In: I S M E Journal. 9, p. 934-945 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Colonic lesions, cytokine profiles, and gut microbiota in plasminogen-deficient mice
Vestergaard, Bill, Krych, Lukasz, Lund, L. R., Jørgensen, B. M. P., Hansen, Lars Hestbjerg, Jensen, Henrik Elvang, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2015, In: Comparative Medicine. 65, 5, p. 382-397 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Current strategies for mobilome research
Jørgensen, T. S., Kiil, A. S., Hansen, M. A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2015, In: Frontiers in Microbiology. 5, 6 p., 750.Research output: Contribution to journal › Journal article › Research › peer-review
Draft Genome Sequence of Isoproturon-Mineralizing Sphingomonas sp. SRS2, Isolated from an Agricultural Field in the United Kingdom
Nielsen, Tue Kjærgaard, Sørensen, S. R. & Hansen, Lars Hestbjerg, 2015, In: Genome Announcements. 3, 3, 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Draft genome sequence of MCPA-degrading Sphingomonas sp. strain ERG5, isolated from a groundwater aquifer in Denmark
Nielsen, Tue Kjærgaard, Kot, Witold, Sørensen, S. R. & Hansen, Lars Hestbjerg, 2015, In: Genome Announcements. 3, 1, 2 p., e01529-14.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Host-specific and pH-dependent microbiomes of copepods in an extensive rearing system
Skovgaard, A., Castro Mejia, J. L., Hansen, Lars Hestbjerg & Nielsen, Dennis Sandris, 2015, In: PLOS ONE. 10, 7, p. e0132516 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of the amidase BbdA that initiates biodegradation of the groundwater micropollutant 2,6-dichlorobenzamide (BAM) in Aminobacter sp. MSH1
T'Syen, J., Tassoni, R., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Leroy, B., Sekhar, A., Wattiez, R., De Mot, R. & Springael, D., 2015, In: Environmental Science & Technology (Washington). 49, 19, p. 11703-11713 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Natural hot spots for gain of multiple resistances: arsenic and antibiotic resistances in heterotrophic, aerobic bacteria from marine hydrothermal vent fields
Farias, P., Santo, C. E., Branco, R., Francisco, R., Santos, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Morais, P. V., 2015, In: Applied and Environmental Microbiology. 81, 7, p. 2534-2543 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of Lactobacillus paracasei subsp. paracasei L. casei W8® on blood levels of triacylglycerol is independent of colonisation
Bjerg, A. T., Sørensen, M. B., Krych, Lukasz, Hansen, Lars Hestbjerg, Astrup, A., Kristensen, M. B. & Nielsen, Dennis Sandris, 2015, In: Beneficial Microbes. 6, 3, p. 263-269 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
Bacterial communities in termite fungus combs are comprised of consistent gut deposits and contributions from the environment
Otani, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Poulsen, Michael, 2016, In: Microbial Ecology. 71, 1, p. 207-220 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diverse gene functions in a soil mobilome
Luo, W., Xu, Z., Riber, Leise, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Soil Biology & Biochemistry. 101, p. 175-183 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enhanced plasmid loss in bacterial populations exposed to the antimicrobial compound irgasan delivered from interpenetrating polymer network silicone hydrogels
Riber, Leise, Burmølle, Mette, Alm, M., Milani, S. M., Thomsen, P., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Plasmid. 87-88, p. 72-78 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Establishment of Bacterial Herbicide Degraders in a Rapid Sand Filter for Bioremediation of Phenoxypropionate-Polluted Groundwater
Feld, L., Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg, Aamand, J. & Albers, C. N., 2016, In: Applied and Environmental Microbiology. 82, 3, p. 878-887Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the complex response to linuron of bacterial communities from biopurification systems by means of cultivation-independent methods
Dealtry, S., Nour, E. H., Holmsgaard, P. N., Ding, G. C., Weichelt, V., Dunon, V., Heuer, H., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Springael, D. & Smalla, K., 2016, In: F E M S Microbiology Ecology. 92, 2, 12 p., fiv157.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasmid metagenomics reveals multiple antibiotic resistance gene classes among the gut microbiomes of hospitalised patients
Jitwasinkul, T., Suriyaphol, P., Tangphatsornruang, S., Hansen, M. A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Permpikul, C., Rongrungruang, Y. & Tribuddharat, C., 2016, In: Journal of Global Antimicrobial Resistance. 6, p. 57-66 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Type 3 fimbriae encoded on plasmids are expressed from a unique promoter without affecting host motility, facilitating an exceptional phenotype that enhances conjugal plasmid transfer
Madsen, Jonas Stenløkke, Riber, Leise, Kot, Witold, Basfeld, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: P L o S One. 11, 9, 19 p., e0162390.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
Degradation of mecoprop in polluted landfill leachate and waste water in a moving bed biofilm reactor
Escolà Casas, M., Nielsen, Tue Kjærgaard, Kot, Witold, Hansen, Lars Hestbjerg, Johansen, A. & Bester, K., 2017, In: Water Research. 121, p. 213-220Research output: Contribution to journal › Journal article › Research › peer-review
Evolution of Sphingomonad Gene Clusters Related to Pesticide Catabolism Revealed by Genome Sequence and Mobilomics of Sphingobium herbicidovorans MH
Nielsen, Tue Kjærgaard, Rasmussen, M., Demanèche, S., Cecillon, S., Vogel, T. M. & Hansen, Lars Hestbjerg, 2017, In: Genome Biology and Evolution. 9, 9, p. 2477-2490Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasmids, viruses, and other circular elements in rat gut
Jørgensen, T. S., Hansen, M. A., Xu, Z., Tabak, M. A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2017, Cold Spring Harbor Laboratory Press, 30 p.Research output: Working paper › Research
- Published
The first characterized phage against a member of the ecologically important sphingomonads reveals high dissimilarity against all other known phages
Nielsen, Tue Kjærgaard, Carstens, A. B., Browne, P., Lametsch, Rene, Neve, H., Kot, Witold & Hansen, Lars Hestbjerg, 2017, In: Scientific Reports. 7, 10 p., 13566.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Response of the bacterial community in an on-farm biopurification system, to which diverse pesticides are introduced over an agricultural season
Holmsgaard, P. N., Dealtry, S., Dunon, V., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Smalla, K., Riber, Leise & Sørensen, Søren Johannes, Oct 2017, In: Environmental Pollution. 229, p. 854-862 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples
Jacobsen, C. S., Nielsen, T. K., Vester, J. K., Stougaard, P., Nielsen, J. L., Voriskova, J., Winding, A., Baldrian, P., Liu, B., Frostegard, A., Pedersen, D., Tveit, A. T., Svenning, M. M., Tebbe, C. C., Ovreas, L., Jakobsen, P. B., Blazewicz, S. J., Hubablek, V., Bertilsson, S., Hansen, L. H. & 4 others, , 2018, In: Scientific Reports. 8, p. 1-6 6 p., 5711.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of exercise training and resveratrol supplementation on gut microbiota composition in high-fat diet fed mice
Brandt, N., Kotowska, D., Kristensen, C. M., Olesen, J., Lützhøft, Ditte Olsen, Halling, Jens Frey, Hansen, M., Al-Soud, W. A., Hansen, Lars Hestbjerg, Kiilerich, P. & Pilegaard, Henriette, 2018, In: Physiological Reports. 6, 20, p. 1-11 e13881.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms
Del Frari, G., Gobbi, Alex, Aggerbeck, M. R., Oliveira, H., Hansen, Lars Hestbjerg & Ferreira, R. B., 2019, In: Frontiers in Plant Science. 10, 19 p., 910.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome Sequences of Highly Arsenite-Resistant Bacteria Brevibacterium sp. Strain CS2 and Micrococcus luteus AS2
Sher, S., Rehman, A., Hansen, Lars Hestbjerg & Nielsen, Tue Kjærgaard, 2019, In: Microbiology Resource Announcements. 8, 31, 2 p., e00531-19.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expanding the Diversity of Myoviridae Phages Infecting Lactobacillus plantarum - A Novel Lineage of Lactobacillus Phages Comprising Five New Members
Kyrkou, I., Carstens, Alexander Byth, Ellegaard-Jensen, L., Kot, Witold, Zervas, A., Djurhuus, Amaru Miranda, Neve, H., Hansen, M. & Hansen, Lars Hestbjerg, 2019, In: Viruses. 11, 7, 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
Fungicides and the Grapevine Wood Mycobiome: A Case Study on Tracheomycotic Ascomycete Phaeomoniella chlamydospora Reveals Potential for Two Novel Control Strategies
Del Frari, G., Gobbi, Alex, Aggerbeck, M. R., Oliveira, H., Hansen, Lars Hestbjerg & Ferreira, R. B., 2019, In: Frontiers in Plant Science. 10, 1405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic and Ecogenomic Characterization of Proteus mirabilis Bacteriophages
Alves, D. R., Nzakizwanayo, J., Dedi, C., Olympiou, C., Hanin, A., Kot, Witold, Hansen, Lars Hestbjerg, Lametsch, Rene, Gahan, C. G. M., Schellenberger, P., Ogilvie, L. A. & Jones, B. V., 2019, In: Frontiers in Microbiology. 10, p. 1-14 1783.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intra- and inter-field diversity of 2,4-dichlorophenoxyacetic acid-degradative plasmids and their tfd catabolic genes in rice fields of the Mekong delta in Vietnam
Nguyen, T. P. O., Hansen, M. A., Hansen, Lars Hestbjerg, Horemans, B., Sørensen, Søren Johannes, De Mot, R. & Springael, D., 2019, In: FEMS Microbiology Ecology. 95, 1, p. 1-11 fiy214.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mouse vendor influence on the bacterial and viral gut composition exceeds the effect of diet
Rasmussen, Torben Sølbeck, de Vries, L., Kot, Witold, Hansen, Lars Hestbjerg, Castro-Mejía, J. L., Vogensen, Finn Kvist, Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2019, In: Viruses. 11, 5, 15 p., 435.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-omics and potential applications in wine production
Sirén, K., Mak, Sarah Siu Tze, Fischer, U., Hansen, Lars Hestbjerg & Gilbert, M Thomas P, 2019, In: Current Opinion in Biotechnology. 56, p. 172-178Research output: Contribution to journal › Review › Research › peer-review
- Published
The Genome and mRNA Transcriptome of the Cosmopolitan Calanoid Copepod Acartia tonsa Dana Improve the Understanding of Copepod Genome Size Evolution
Jørgensen, T. S., Petersen, Bent, Petersen, H. C. B., Browne, Patrick Denis, Prost, S., Stillman, J. H., Hansen, Lars Hestbjerg & Hansen, B. W., 2019, In: Genome Biology and Evolution. 11, 5, p. 1440-1450Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Whole Genome Sequence and mRNA Transcriptome of the Tropical Cyclopoid Copepod Apocyclops royi
Jorgensen, T. S., Nielsen, B. L. H., Petersen, Bent, Browne, Patrick Denis, Hansen, B. W. & Hansen, Lars Hestbjerg, 2019, In: G3: Genes, Genomes, Genetics (Bethesda). 9, 5, p. 1295-1302Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multidonor FMT capsules improve symptoms and decrease fecal calprotectin in ulcerative colitis patients while treated - an open-label pilot study
Cold, F., Browne, Patrick Denis, Günther, S., Halkjaer, S. I., Petersen, Andreas Munk, Al-Gibouri, Z., Hansen, Lars Hestbjerg & Christensen, A. H., 4 Apr 2019, In: Scandinavian Journal of Gastroenterology. 54, 3, p. 289-296 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel six-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions
Carstens, Alexander Byth, Djurhuus, Amaru Miranda, Kot, Witold & Hansen, Lars Hestbjerg, 1 May 2019, In: FEMS Microbiology Letters. 366, 9, p. 1-8 fnz101.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Genomics of Aerobic Photoheterotrophs in Wheat Phyllosphere Reveals Divergent Evolutionary Patterns of Photosynthetic Genes in Methylobacterium spp
Zervas, A., Zeng, Y., Madsen, A. M. & Hansen, Lars Hestbjerg, 1 Oct 2019, In: Genome Biology and Evolution. 11, 10, p. 2895-2908Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel hybrid concept for implementation in drinking water treatment targets micropollutant removal by combining membrane filtration with biodegradation
Hylling, O., Nikbakht Fini, M., Ellegaard-Jensen, L., Muff, J., Madsen, H. T., Aamand, J. & Hansen, Lars Hestbjerg, 1 Dec 2019, In: Science of the Total Environment. 694, p. 1-12 133710.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Mesorhizobium intechi sp. nov. isolated from nodules of Lotus tenuis in soils of the Flooding Pampa, Argentina
Julia Estrella, M., Florencia Fontana, M., Cumpa Velasquez, L. M., Torres Tejerizo, G. A., Diambra, L., Hansen, Lars Hestbjerg, Pistorio, M. & Ines Sannazzaro, A., 2020, In: Systematic and Applied Microbiology. 43, 1, 8 p., 126044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential
Olsen, N. S., Hendriksen, N. B., Hansen, Lars Hestbjerg & Kot, Witold, 2020, In: PHAGE: Therapy, Applications, and Research. 1, 3, p. 137-148Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Rare, Virulent Clostridium perfringens Bacteriophage Susfortuna Is the First Isolated Bacteriophage in a New Viral Genus
Pedersen, Julie Stenberg, Kot, Witold, Plöger, M., Lametsch, Rene, Neve, H., Franz, C. M. A. P. & Hansen, Lars Hestbjerg, 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 230-236 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioaugmented Sand Filter Columns Provide Stable Removal of Pesticide Residue From Membrane Retentate
Ellegaard-Jensen, L., Schostag, M. D., Fini, M. N., Badawi, N., Gobbi, Alex, Aamand, J. & Hansen, Lars Hestbjerg, 2020, In: Frontiers in Water. 2, 13 p., 603567.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone biodeterioration - The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community
Eriksen, A. M. H., Nielsen, Tue Kjærgaard, Matthiesen, H., Carøe, C., Hansen, Lars Hestbjerg, Gregory, D. J., Turner-Walker, G., Collins, Matthew James & Gilbert, M Thomas P, 2020, In: PLoS ONE. 15, 10 October, 24 p., e0240512.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome and Plasmid Sequences of Salmonella enterica subsp. enterica Serovar Enteritidis PT1, Obtained from the Salmonella Reference Laboratory at Public Health England, Colindale, United Kingdom
Anwar, M. Z., Zervas, A., Hansen, Lars Hestbjerg, Barker, G., Anesio, A. M. & Jacobsen, C. S., 2020, In: Microbiology Resource Announcements. 9, 2, 2 p., ARTN e01064-19.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detection of preQ0 deazaguanine modifications in bacteriophage CAjan DNA using Nanopore sequencing reveals same hypermodification at two distinct DNA motifs
Kot, Witold, Olsen, Nikoline S., Nielsen, Tue Kjærgaard, Hutinet, G., de Crecy-Lagard, V., Cui, L., Dedon, P. C., Carstens, Alexander Byth, Moineau, S., Swairjo, M. A. & Hansen, Lars Hestbjerg, 2020, In: Nucleic Acids Symposium Series. 48, 18, p. 10383-10396 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment
Olsen, Nikoline S., Forero Junco, Laura Milena, Kot, Witold & Hansen, Lars Hestbjerg, 2020, In: Viruses. 12, 9, 21 p., 986.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Faecal virome transplantation decreases symptoms of type 2 diabetes and obesity in a murine model
Rasmussen, Torben Sølbeck, Mentzel, Caroline M. Junker, Kot, Witold, Castro-Mejiá, J. L., Zuffa, S., Swann, J. R., Hansen, Lars Hestbjerg, Vogensen, Finn Kvist, Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2020, In: Gut. 69, 12, p. 2122-2130 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fecal Microbiota Transplantation in the Treatment of Chronic Pouchitis: A Systematic Review
Cold, F., Kousgaard, S. J., Halkjaer, S. I., Petersen, Andreas Munk, Nielsen, H. L., Thorlacius-Ussing, O. & Hansen, Lars Hestbjerg, 2020, In: Microorganisms. 8, 9, 17 p., 1433.Research output: Contribution to journal › Review › Research › peer-review
- Published
Fermentable Dietary Fiber Promotes Helminth Infection and Exacerbates Host Inflammatory Responses
Myhill, L. J., Stolzenbach, S., Mejer, Helena, Jakobsen, S. R., Hansen, Tina Vicky Alstrup, Andersen, D., Brix, S., Hansen, Lars Hestbjerg, Krych, Lukasz, Nielsen, Dennis Sandris, Nejsum, P., Thamsborg, Stig Milan & Williams, Andrew Richard, 2020, In: The Journal of Immunology. 204, 11, p. 3042-3055 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor organisms
Browne, Patrick Denis, Nielsen, Tue Kjærgaard, Kot, Witold, Aggerholm, A., Gilbert, M Thomas P, Puetz, Lara Christine, Rasmussen, M., Zervas, A. & Hansen, Lars Hestbjerg, 2020, In: GigaScience. 9, 2, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of phages on soil bacterial communities and nitrogen availability under different assembly scenarios
Braga, L. P. P., Spor, A., Kot, Witold, Breuil, M., Hansen, Lars Hestbjerg, Setubal, J. C. & Philippot, L., 2020, In: Microbiome. 8, 1, 14 p., 52.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina
Aguilar, M. O., Gobbi, Alex, Browne, Patrick Denis, Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Semorile, L. & Pistorio, M., 2020, In: PLoS ONE. 15, 12, 19 p., 0243848.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inulin and milk mineral fortification of a pork sausage exhibits distinct effects on the microbiome and biochemical activity in the gut of healthy rats
Thøgersen, R., Castro-Mejía, J. L., Sundekilde, U. K., Hansen, Lars Hestbjerg, Gray, N., Kuhnle, G., Jørgensen, Niklas Rye, Hansen, Axel Kornerup, Nielsen, Dennis Sandris & Bertram, H. C., 2020, In: Food Chemistry. 331, 10 p., 127291.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isolation and characterisation of novel phages infecting Lactobacillus plantarum and proposal of a new genus, "Silenusvirus"
Kyrkou, I., Carstens, Alexander Byth, Ellegaard-Jensen, L., Kot, Witold, Zervas, A., Djurhuus, Amaru Miranda, Neve, H., Franz, C. M. A. P., Hansen, M. & Hansen, Lars Hestbjerg, 2020, In: Scientific Reports. 10, 1, 10 p., 8763.Research output: Contribution to journal › Journal article › Research › peer-review
Land use as a driver for protist community structure in soils under agricultural use across Europe
Santos, S. S., Schöler, A., Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg, Schloter, M. & Winding, A., 2020, In: Science of the Total Environment. 717, 137228.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analysis of planktonic riverine microbial consortia using nanopore sequencing reveals insight into river microbe taxonomy and function: [incl. Erratum]
Reddington, K., Eccles, D., O'Grady, J., Drown, D. M., Hansen, L. H., Nielsen, T. K., Ducluzeau, A-L., Leggett, R. M., Heavens, D., Peel, N., Snutch, T. P., Bayega, A., Oikonomopoulos, S., Ragoussis, J., Barry, T., van der Helm, E., Jolic, D., Richardson, H., Jansen, H., Tyson, J. R. & 2 others, , 2020, In: GigaScience. 9, 6, 12 p., 053.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbiota in foods from Inuit traditional hunting
Hauptmann, A. L., Paulová, P., Hansen, Lars Hestbjerg, Sicheritz-Pontén, Thomas, Mulvad, G. & Nielsen, Dennis Sandris, 2020, In: PLoS ONE. 15, 1, 15 p., e0227819.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pectobacterium Phage Jarilo Displays Broad Host Range and Represents a Novel Genus of Bacteriophages Within the Family Autographiviridae
Pedersen, Julie Stenberg, Carstens, Alexander Byth, Djurhuus, Amaru Miranda, Kot, Witold, Neve, H. & Hansen, Lars Hestbjerg, 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 237-244 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physical fitness in community-dwelling older adults is linked to dietary intake, gut microbiota, and metabolomic signatures
Castro-Mejia, J. L., Khakimov, B., Krych, L., Bülow, J., Bechshøft, R. L., Højfeldt, G., Mertz, K. H., Garne, E. S., Schacht, S. R., Ahmad, H. F., Kot, W., Hansen, L. H., Perez-Cueto, F. J. A., Lind, M. V., Lassen, A. J., Tetens, I., Jensen, T., Reitelseder, S., Jespersen, A. P., Holm, L. & 2 others, , 2020, In: Aging Cell. 19, 3, 13 p., e13105.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Potential Rhodopsin- and Bacteriochlorophyll-Based Dual Phototrophy in a High Arctic Glacier
Zeng, Y., Chen, X., Madsen, A. M., Zervas, A., Nielsen, Tue Kjærgaard, Andrei, A., Lund-Hansen, L. C., Liu, Y. & Hansen, Lars Hestbjerg, 2020, In: mBio. 11, 6, 22 p., e02641-20.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Presentation of Three Novel Tailed Phages Targeting Multiple Strains of Pseudomonas syringae
Jørgensen, J. B., Djurhuus, Amaru Miranda, Carstens, Alexander Byth, Kot, Witold, Neve, H., Morris, C. E. & Hansen, Lars Hestbjerg, 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 245-250 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Releasing the microbes from old bones: the effect of different DNA extraction protocols on microbial community profiling
Eriksen, A. M. H., Puetz, Lara Christine, Rocha, C., Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg & Gilbert, M Thomas P, 2020, In: STAR: Science & Technology of Archaeological Research. 6, 1, p. 1-15 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Seasonal epiphytic microbial dynamics on grapevine leaves under biocontrol and copper fungicide treatments
Gobbi, Alex, Kyrkou, I., Filippi, E., Ellegaard-Jensen, L. & Hansen, Lars Hestbjerg, 2020, In: Scientific Reports. 10, 1, 13 p., 681.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Mobilome: Metagenomic Analysis of Circular Plasmids, Viruses, and Other Extrachromosomal Elements
Browne, Patrick Denis, Kot, Witold, Jørgensen, T. S. & Hansen, Lars Hestbjerg, 2020, Horizontal Gene Transfer: Methods and Protocols. Cruz, F. D. L. (ed.). Humana Press, p. 253-264 (Methods in Molecular Biology, Vol. 2075).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Two New Dickeya dadantii Phages with Odd Growth Patterns Expand the Diversity of Phages Infecting Soft Rot Pectobacteriaceae
Djurhuus, Amaru Miranda, Carstens, Alexander Byth, Neve, H., Kot, Witold & Hansen, Lars Hestbjerg, 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 251-259 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Two novel bacteriophage genera from a groundwater reservoir highlight subsurface environments as underexplored biotopes in bacteriophage ecology
Hylling, O., Carstens, Alexander Byth, Kot, Witold, Hansen, M., Neve, H., Franz, C. M. A. P., Johansen, A., Ellegaard-Jensen, L. & Hansen, Lars Hestbjerg, 2020, In: Scientific Reports. 10, 1, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Under the Christmas Tree: Belowground Bacterial Associations With Abies nordmanniana Across Production Systems and Plant Development
Garcia-Lemos, A. M., Gobbi, Alex, Nicolaisen, Mette Haubjerg, Hansen, Lars Hestbjerg, Roitsch, Thomas Georg, Veierskov, Bjarke & Nybroe, O., 2020, In: Frontiers in Microbiology. 11, 17 p., 198.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unravelling plasmidome distribution and interaction with its hosting microbiome
Kav, A. B., Rozov, R., Bogumil, D., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Benhar, I., Halperin, E., Shamir, R. & Mizrahi, I., 2020, In: Environmental Microbiology. 22, 1, p. 32-44Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms
Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome Sequence of Paenibacillus sp. Strain 37, a Plant Growth-Promoting Bacterium Isolated from the Rhizosphere of Abies nordmanniana (Nordmann Fir)
Garcia-Lemos, A. M., Hennessy, Rosanna Catherine, Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg & Nicolaisen, Mette Haubjerg, 2021, In: Microbiology Resource Announcements. 10, 8, 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome Sequence of the Cytokinin-Producing Biocontrol Strain Pseudomonas fluorescens G20-18
Nielsen, Tue Kjærgaard, Mekureyaw, M. F., Hansen, Lars Hestbjerg, Nicolaisen, Mette Haubjerg, Roitsch, Thomas Georg & Hennessy, Rosanna Catherine, 2021, In: Microbiology Resource Announcements. 10, 30, 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engraftment of strictly anaerobic oxygen-sensitive bacteria in irritable bowel syndrome patients following fecal microbiota transplantation does not improve symptoms
Browne, Patrick Denis, Cold, F., Petersen, Andreas Munk, Halkjær, S. I., Christensen, A. H., Günther, S. & Hansen, Lars Hestbjerg, 2021, In: Gut Microbes. 13, 1, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enterococcus phage Nonaheksakonda infecting clinical isolates of Enterococcus faecalis represents a new lineage in the family Siphoviridae
Olsen, Nikoline S., Nielsen, K. J., Plöger, M., Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Archives of Virology. 166, p. 593-599 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epigenetic Memories: The Hidden Drivers of Bacterial Persistence?
Riber, Leise & Hansen, Lars Hestbjerg, 2021, In: Trends in Microbiology. 29, 3, p. 190-194 5 p.Research output: Contribution to journal › Editorial › Research
- Published
Extension of Plant Phenotypes by the Foliar Microbiome
Hawkes, C. V., Kjøller, Rasmus, Raaijmakers, J. M., Riber, Leise, Christensen, Svend, Rasmussen, Simon, Christensen, Jan H., Dahl, A. B., Westergaard, Jesper Cairo, Nielsen, Mads, Brown-Guedira, G. & Hansen, Lars Hestbjerg, 2021, In: Annual Review of Plant Biology. 72, p. 823-846 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress
Nilsson, J. F., Castellani, L. G., Draghi, W. O., Mogro, E. G., Wibberg, D., Winkler, A., Hansen, Lars Hestbjerg, Schluüter, A., Puühler, A., Kalinowski, J., Tejerizo, G. A. T. & Pistorio, M., 2021, In: FEMS Microbiology Ecology. 97, 1, fiaa235.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lead Drives Complex Dynamics of a Conjugative Plasmid in a Bacterial Community
Cyriaque, V., Madsen, Jonas Stenløkke, Fievez, L., Leroy, B., Hansen, Lars Hestbjerg, Bureau, F., Sørensen, Søren Johannes & Wattiez, R., 2021, In: Frontiers in Microbiology. 12, 14 p., 655903.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analysis of a keratin-degrading bacterial consortium provides insight into the keratinolytic mechanisms
Kang, D., Huang, Y., Nesme, Joseph, Herschend, J., Jacquiod, S., Kot, Witold, Hansen, Lars Hestbjerg, Lange, L. & Sørensen, Søren Johannes, 2021, In: Science of the Total Environment. 761, 9 p., 143281.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metaviromes Reveal the Dynamics of Pseudomonas Host-Specific Phages Cultured and Uncultured by Plaque Assay
Alanin, K. W. S., Forero Junco, Laura Milena, Jørgensen, J. B., Nielsen, Tue Kjærgaard, Rasmussen, Morten Arendt, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Viruses. 13, 6, 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel virocell metabolic potential revealed in agricultural soils by virus-enriched soil metagenome analysis
Braga, L. P. P., Coutinho, F. H., Amgarten, D. E., Kot, Witold, Hansen, Lars Hestbjerg, Setubal, J. C. & Philippot, L., 2021, In: Environmental Microbiology Reports. 13, 3, p. 348-354 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pre-clinical evaluation of the effect of co-medication with antibiotics and oral steroids in Gottingen Minipigs on the biological activity of the probiotic medicinal product TSO (Trichuris suis ova)
Prosberg, M. V., Kringel, H., Kapel, J. S., Kapel, B. S., Fredensborg, Brian Lund, Petersen, Andreas Munk, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Kapel, H. S., Jacobsen, K. R., Mikkelsen, L. F. & Kapel, Christian, 2021, In: Parasitology Research. 120, p. 743-746Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematic review with meta-analysis: encapsulated faecal microbiota transplantation - evidence for clinical efficacy
Cold, F., Baunwall, S. M. D., Dahlerup, J. F., Petersen, Andreas Munk, Hvas, C. L. & Hansen, Lars Hestbjerg, 2021, In: Therapeutic Advances in Gastroenterology. 14, 19 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
The aerobiome uncovered: Multi-marker metabarcoding reveals potential drivers of turn-over in the full microbial community in the air
de Groot, G. A., Geisen, S., Wubs, E. R. J., Meulenbroek, L., Laros, I., Snoek, L. B., Lammertsma, D. R., Hansen, Lars Hestbjerg & Slim, P. A., 2021, In: Environment International. 154, 106551.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The complete genome of 2,6-dichlorobenzamide (BAM) degrader Aminobacter sp. MSH1 suggests a polyploid chromosome, phylogenetic reassignment, and functions of plasmids
Nielsen, Tue Kjærgaard, Horemans, B., Lood, C., T’Syen, J., van Noort, V., Lavigne, R., Ellegaard-Jensen, L., Hylling, Ole, Aamand, J., Springael, D. & Hansen, Lars Hestbjerg, 2021, In: Scientific Reports. 11, 12 p., 18943.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of faecal microbiota transplantation on abdominal pain, stool frequency, and stool form in patients with moderate-to-severe irritable bowel syndrome: results from a randomised, double-blind, placebo-controlled study
Madsen, A. M. A., Halkjaer, S. I., Christensen, A. H., Guenther, S., Browne, Patrick Denis, Kallemose, T., Hansen, Lars Hestbjerg & Petersen, Andreas Munk, 2021, In: Scandinavian Journal of Gastroenterology. 56, 7, p. 761-769 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The gut microbiome and abiotic factors as potential determinants of postprandial glucose responses: A single-arm meal study
Nestel, N., Hvass, J. D., Bahl, M. I., Hansen, Lars Hestbjerg, Krych, Lukasz, Nielsen, Dennis Sandris, Dragsted, Lars Ove & Roager, Henrik Munch, 2021, In: Frontiers in Nutrition. 7, 9 p., 594850.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
A global microbiome survey of vineyard soils highlights the microbial dimension of viticultural terroirs
Gobbi, Alex, Acedo, A., Imam, N., Santini, R. G., Ortiz-Alvarez, R., Ellegaard-Jensen, L., Belda, I. & Hansen, Lars Hestbjerg, 2022, In: Communications Biology . 5, 9 p., 241.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antibiotic resistance genes are differentially mobilized according to resistance mechanism
Nielsen, Tue Kjærgaard, Browne, Patrick Denis & Hansen, Lars Hestbjerg, 2022, In: GigaScience. 11, 17 p., giac072.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Combining reverse osmosis and microbial degradation for remediation of drinking water contaminated with recalcitrant pesticide residue
Schostag, M. D., Gobbi, Alex, Fini, M. N., Ellegaard-Jensen, L., Aamand, J., Hansen, Lars Hestbjerg, Muff, J. & Albers, C. N., 2022, In: Water Research. 216, 12 p., 118352.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complete Genome Sequence and Benzophenone-3 Mineralisation Potential of Rhodococcus sp. USK10, A Bacterium Isolated from Riverbank Sediment
Martin, J. D., Krüger, U. S., Zervas, A., Schostag, M., Nielsen, Tue Kjærgaard, Aamand, J., Hansen, Lars Hestbjerg & Ellegaard-Jensen, L., 2022, In: Applied Microbiology. 2, p. 104-112 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Critical Assessment of Metagenome Interpretation: the second round of challenges
Meyer, F., Fritz, A., Deng, Z. L., Koslicki, D., Lesker, T. R., Gurevich, A., Robertson, G., Alser, M., Antipov, D., Beghini, F., Bertrand, D., Brito, J. J., Brown, C. T., Buchmann, J., Buluç, A., Chen, B., Chikhi, R., Clausen, P. T. L. C., Cristian, A., Dabrowski, P. W. & 83 others, , 2022, In: Nature Methods. 19, 4, p. 429-440Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of gluten-free diet and antibiotics on murine gut microbiota and immune response to tetanus vaccination
Kihl, Pernille, Krych, Lukasz, Deng, Ling, Hansen, Lars Hestbjerg, Buschard, K., Skov, Søren, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2022, In: Plos One. 17, 4, 21 p., e0266719.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic, Phenotypic and Metabolic Diversity of Yeasts From Wheat Flag Leaves
Gouka, L., Vogels, C., Hansen, Lars Hestbjerg, Raaijmakers, J. M. & Cordovez, V., 2022, In: Frontiers in Plant Science. 13, 13 p., 908628.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut Microbiome and Its Cofactors Are Linked to Lipoprotein Distribution Profiles
Castro-Mejía, J. L., Khakimov, Bekzod, Aru, Violetta, Lind, M. V., Garne, E., Paulová, P., Tavakkoli, E., Hansen, Lars Hestbjerg, Smilde, Age Klaas, Holm, L., Engelsen, Søren Balling & Nielsen, Dennis Sandris, 2022, In: Microorganisms. 10, 11, 2156.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-Term Safety Following Faecal Microbiota Transplantation as a Treatment for Recurrent Clostridioides difficile Infection Compared with Patients Treated with a Fixed Bacterial Mixture: Results from a Retrospective Cohort Study
Cold, F., Svensson, C. K., Petersen, Andreas Munk, Hansen, Lars Hestbjerg & Helms, Morten, 2022, In: Cells. 11, 3, 18 p., 435.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Machine learning and deep learning applications in microbiome research
Hernandez Medina, Ricardo, Kutuzova, Svetlana, Nielsen, Knud Nor, Johansen, Joachim, Hansen, Lars Hestbjerg, Nielsen, Mads & Rasmussen, Simon, 2022, In: ISME Communications. 2, 7 p., 98.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Muskoxen homogenise soil microbial communities and affect the abundance of methanogens and methanotrophs
Aggerbeck, M. R., Nielsen, Tue Kjærgaard, Mosbacher, J. B., Schmidt, N. M. & Hansen, Lars Hestbjerg, 2022, In: Science of the Total Environment. 827, 9 p., 153877.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Salmonella phage akira, infecting selected Salmonella enterica Enteritidis and Typhimurium strains, represents a new lineage of bacteriophages
Olsen, Nikoline S., Lametsch, Rene, Wagner, N., Hansen, Lars Hestbjerg & Kot, Witold, 2022, In: Archives of Virology. 167, p. 2049–2056Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Successful treatment of Clostridioidesdifficile infection with single-donor faecal microbiota transplantation capsules
Cold, F., Svensson, C. K., Christensen, A. H., Günther, S., Petersen, Andreas Munk, Hansen, Lars Hestbjerg & Helms, Morten, 2022, In: Danish Medical Journal. 69, 2, 10 p., 09210712.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Successful treatment of Clostridioidesdifficile infection with single-donorfaecal microbiota transplantation capsules
Cold, F., Svensson, C. K., Günther, S., Petersen, Andreas Munk, Hansen, Lars Hestbjerg & Helms, Morten, 2022, In: Danish Medical Journal. 69, 2, 10 p., A09210712.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Bacillus cereus Strain EC9 Primes the Plant Immune System for Superior Biocontrol of Fusarium oxysporum
Madriz Ordenana, Kenneth, Pazarlar, S., Jørgensen, Hans Jørgen Lyngs, Nielsen, Tue Kjærgaard, Zhang, Y., Nielsen, K. L., Hansen, Lars Hestbjerg & Thordal-Christensen, Hans, 2022, In: Plants. 11, 5, 19 p., 687.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
A novel Queuovirinae lineage of Pseudomonas aeruginosa phages encode dPreQ0 DNA modifications with a single GA motif that provide restriction and CRISPR Cas9 protection in vitro
Olsen, Nikoline S., Nielsen, Tue Kjærgaard, Cui, L., Dedon, P., Neve, H., Hansen, Lars Hestbjerg & Kot, Witold, 2023, In: Nucleic Acids Research. 51, 16, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cessation of grazing causes biodiversity loss and homogenization of soil food webs
Schrama, M., Quist, C. W., Arjen De Groot, G., Cieraad, E., Ashworth, D., Laros, I., Hansen, Lars Hestbjerg, Leff, J., Fierer, N. & Bardgett, R. D., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2011, 12 p., 20231345.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detection of nucleotide modifications in bacteria and bacteriophages: Strengths and limitations of current technologies and software
Nielsen, Tue Kjærgaard, Forero Junco, Laura Milena, Kot, Witold, Moineau, S., Hansen, Lars Hestbjerg & Riber, Leise, 2023, In: Molecular Ecology. 32, 6, p. 1236-1247 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fecal virome transfer improves proliferation of commensal gut Akkermansia muciniphila and unexpectedly enhances the fertility rate in laboratory mice
Rasmussen, Torben Sølbeck, Mentzel, Caroline M. Junker, Danielsen, M. R., Jakobsen, Rasmus Riemer, Zachariassen, L. S. F., Castro Mejia, J. L., Brunse, Anders, Hansen, Lars Hestbjerg, Hansen, Camilla Hartmann Friis, Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2023, In: Gut Microbes. 15, 1, 21 p., 2208504.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four novel Curtobacterium phages isolated from environmental samples
Alanin, K. W. S., Olsen, Nikoline S., Djurhuus, Amaru Miranda, Carstens, Alexander Byth, Nielsen, Tue Kjærgaard, Rothgardt, M. M., Russel, A. M., Wagner, N., Lametsch, Rene, Bak, Frederik, Hennessy, Rosanna Catherine, Nicolaisen, Mette Haubjerg, Hansen, Lars Hestbjerg & Kot, Witold, 2023, In: Archives of Virology. 168, 3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic rearrangements in Pseudomonas amygdali pathovar aesculi shape coronatine plasmids
Nielsen, Tue Kjærgaard, Winther-Have, Caroline Sophie W, Thomsen, Iben Margrete, Jackson, R. W., Rabiey, M., Hennessy, Rosanna Catherine, Bak, Frederik, Kot, Witold, Nicolaisen, Mette Haubjerg, Carstens, Alexander Byth & Hansen, Lars Hestbjerg, 2023, In: Infection, Genetics and Evolution. 113, 10 p., 105486.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intestinal epigenotype of Atlantic salmon (Salmo salar) associates with tenacibaculosis and gut microbiota composition
Hansen, Søren Blikdal, Bozzi, D., Mak, Sarah Siu Tze, Clausen, C. G., Nielsen, Tue Kjærgaard, Kodama, M., Hansen, Lars Hestbjerg, Gilbert, M Thomas P & Limborg, Morten Tønsberg, 2023, In: Genomics. 115, 3, 9 p., 110629.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pheno- and Genotyping of Three Novel Bacteriophage Genera That Target a Wheat Phyllosphere Sphingomonas Genus
Riber, Leise, Carstens, Alexander Byth, Dougherty, Peter Erdmann, Roy, C., Willenbücher, K., Hille, F., Franz, C. M. A. P. & Hansen, Lars Hestbjerg, 2023, In: Microorganisms. 11, 7, 17 p., 1831.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pruning Wound Protection Products Induce Alterations in the Wood Mycobiome Profile of Grapevines
Del Frari, G., Aggerbeck, M. R., Gobbi, Alex, Ingrà, C., Volpi, L., Nascimento, T., Ferrandino, A., Hansen, Lars Hestbjerg & Ferreira, R. B., 2023, In: Journal of Fungi. 9, 4, 20 p., 488.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Replication Protein Rep Provides Selective Advantage to Viruses in the Presence of CRISPR-Cas Immunity
Zhang, W., Bhoobalan-Chitty, Y., Zhai, Xichuan, Hui, Y., Hansen, Lars Hestbjerg, Deng, Ling & Peng, Xu, 2023, In: CRISPR Journal. 6, 1, p. 32-42Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three novel Erwinia billingiae phages isolated from organic waste represent three new genera
Alanin, K. W. S., Olsen, Nikoline S., Djurhuus, Amaru Miranda, Carstens, Alexander Byth, Nielsen, Tue Kjærgaard, Wagner, N., Lametsch, Rene, Bak, Frederik, Hennessy, Rosanna Catherine, Nicolaisen, Mette Haubjerg, Kot, Witold & Hansen, Lars Hestbjerg, 2023, In: Archives of Virology. 168, 7 p., 71.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Widespread and largely unknown prophage activity, diversity, and function in two genera of wheat phyllosphere bacteria
Dougherty, Peter Erdmann, Nielsen, Tue Kjærgaard, Riber, Leise, Lading, H. H., Forero Junco, Laura Milena, Kot, Witold, Raaijmakers, J. M. & Hansen, Lars Hestbjerg, 2023, In: ISME Journal. 17, 12, p. 2415-2425Research output: Contribution to journal › Journal article › Research › peer-review
- 2024
- E-pub ahead of print
Field and laboratory guidelines for reliable bioinformatic and statistical analysis of bacterial shotgun metagenomic data
Aizpurua Arrieta, Ostaizka, Dunn, Rob, Hansen, Lars Hestbjerg, Gilbert, M Thomas P & Alberdi, Antton, 2024, (E-pub ahead of print) In: Critical Reviews in Biotechnology.Research output: Contribution to journal › Review › Research › peer-review
- Published
Insights into the circular: The cryptic plasmidome and its derived antibiotic resistome in the urban water systems
Yu, Z., He, Wanli, Klincke, F., Madsen, Jonas Stenløkke, Kot, Witold, Hansen, Lars Hestbjerg, Quintela-Baluja, M., Balboa, S., Dechesne, A., Smets, B., Nesme, Joseph & Sørensen, Søren Johannes, 2024, In: Environment International. 183, 12 p., 108351.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 4930
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Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
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3030
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Research output: Contribution to conference › Poster › Research
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Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria
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