Dennis Sandris Nielsen

Dennis Sandris Nielsen

Professor


  1. 2024
  2. Published

    Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages

    Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A Stress Reduction Intervention for Lactating Mothers Alters Maternal Gut, Breast Milk, and Infant Gut Microbiomes: Data from a Randomized Controlled Trial

    Yu, J., Zhang, Y., Wells, J. C. K., Wei, Z., Bajaj-Elliott, M., Nielsen, Dennis Sandris & Fewtrell, M. S., 2024, In: Nutrients. 16, 7, 15 p., 1074.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial

    Madsen, M. T. B., Landberg, R., Nielsen, Dennis Sandris, Zhang, Yichang, Anneberg, O. M. R., Lauritzen, Lotte & Damsgaard, Camilla Trab, 2024, In: American Journal of Clinical Nutrition. 119, 1, p. 18-28

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    High fat diet is associated with gut microbiota dysbiosis and decreased gut microbial derived metabolites related to metabolic health in young Göttingen Minipigs

    Lützhøft, Ditte Olsen, Bækgård, Cecilie, Wimborne, E., Straarup, E. M., Pedersen, K. M., Swann, J. R., Pedersen, H. D., Kristensen, K., Morgills, L., Nielsen, Dennis Sandris, Hansen, Axel Kornerup, Bracken, M. K., Cirera, Susanna & Christoffersen, B. Ø., 2024, In: PLoS ONE. 19, 3, 27 p., e0298602.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Purification and Up-Concentration of Bacteriophages and Viruses from Fecal Samples

    Larsen, Frej Andreas Nøhr, Jakobsen, Rasmus Riemer, Mao, Xiaotian, Castro-Mejia, J., Deng, Ling & Nielsen, Dennis Sandris, 2024, Bacteriophages: Methods and Protocols. Humana Press, p. 105-110 6 p. (Methods in Molecular Biology, Vol. 2738).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  7. Published

    Synergistic activity of Limosilactobacillus reuteri KUB-AC5 and water-based plants against Salmonella challenge in a human in vitro gut model

    Mok, K., Honwichit, O., Funnuam, T., Charoensiddhi, S., Nitisinprasert, S., Nielsen, Dennis Sandris & Nakphaichit, M., 2024, In: Scientific Reports. 14, 12 p., 4730.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The effect of in vitro simulated colonic pH gradients on microbial activity and metabolite production using common prebiotics as substrates

    Xie, Zhuqing, He, W., Gobbi, Alex, Bertram, H. C. & Nielsen, Dennis Sandris, 2024, In: BMC Microbiology. 24, 13 p., 83.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. 2023
  10. Published

    CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice

    Rasmussen, Torben Sølbeck, Koefoed, A. K., Deng, Ling, Muhammed, Musemma Kedir, Rousseau, G. M., Kot, Witold, Sprotte, S., Neve, H., Franz, C. M. A. P., Hansen, Axel Kornerup, Vogensen, Finn Kvist, Moineau, S. & Nielsen, Dennis Sandris, 2023, In: ISME Journal. 17, p. 432–442

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice

    Zachariassen, L. F., Ebert, M. B. B., Mentzel, Caroline M. Junker, Deng, Ling, Krych, Lukasz, Nielsen, Dennis Sandris, Stokholm, Jakob & Hansen, Camilla Hartmann Friis, 2023, In: Gut Microbes. 15, 2, 15 p., 2271151.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Choice of Ultrafilter Affects Recovery Rate of Bacteriophages

    Larsen, Frej Andreas Nøhr, Offersen, Simone Margaard, Li, V. R., Deng, Ling, Nielsen, Dennis Sandris & Rasmussen, Torben Sølbeck, 2023, In: Viruses. 15, 10, 12 p., 2051.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese

    Fatemizadeh, S. S., Krych, Lukasz, Castro-Mejía, J. L., Stefanova, Denitsa Vladimirova, Kot, Witold, Najafi, M. B. H. & Nielsen, Dennis Sandris, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0047922.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Complete and Draft Genome Sequences of 52 Bacillus and Priestia Strains Isolated from West African Fermentations and 26 Reference Strains from a Public Culture Collection

    Wiedenbein, Emma Schack, Canoy, Tessa Suzanne, Hui, Y., Parkouda, C., Compaoré, C. S., Ametefe, E., Jakobsen, M., Jespersen, Lene, Nielsen, Dennis Sandris & Roux, S. (ed.), 2023, In: Microbiology resource announcements. 12, 7, 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Dietary non-starch polysaccharides impair immunity to enteric nematode infection

    Valente, Angela Hørdum, Jensen, K. M. R., Myhill, Laura Jessica, Zhu, L., Mentzel, Caroline M. Junker, Krych, Lukasz, Simonsen, H. T., Castro-Mejía, J. L., Gobbi, Alex, Bach Knudsen, K. E., Nielsen, Dennis Sandris, Thamsborg, Stig Milan & Williams, Andrew Richard, 2023, In: BMC Biology. 21, 16 p., 138.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published
  17. Published

    Effect of processing on in vitro digestibility (IVPD) of food proteins

    Orlien, Vibeke, Aalaei, K., Poojary, Mahesha Manjunatha, Nielsen, Dennis Sandris, Ahrné, Lilia & Ruiz Carrascal, Jorge, 2023, In: Critical Reviews in Food Science and Nutrition. 63, 16, p. 2790-2839

    Research output: Contribution to journalReviewResearchpeer-review

  18. Published

    Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee Apis mellifera spp. ruttneri

    Gaggìa, F., Jakobsen, Rasmus Riemer, Alberoni, D., Baffoni, L., Cutajar, S., Mifsud, D., Nielsen, Dennis Sandris & Di Gioia, D., 2023, In: Frontiers in Microbiology. 14, 15 p., 1127717.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Expanding known viral diversity in the healthy infant gut

    Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, Bisgaard, H., Enault, F., Stokholm, Jakob, Moineau, S., Petit, M. A. & Nielsen, Dennis Sandris, 2023, In: Nature Microbiology. 8, p. 986–998

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published
  21. Published

    High-throughput Amplicon Sequencing of Gut Microbiome Sea Cucumber in Pahang, Malaysia

    Choo, M. Y., Yusof, M. F., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050009. (AIP Conference Proceedings, Vol. 2682).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  22. Published

    IDDF2023-ABS-0301 Pathogenic fungi of rhodotorula dairenensis is linked with colorectal cancer patients in malaysia

    Yunus, A., Mokhtar, N. M., Raja Ali, R. A., Kendong, S. M. A., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, In: Gut. 72, p. A132 1 p.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  23. Published

    Not simply a matter of parents—Infants’ sleep-wake patterns are associated with their regularity of eating

    Mühlematter, C., Nielsen, Dennis Sandris, Castro-Mejía, J. L., Brown, S. A., Rasch, B., Wright, K. P., Walser, J. C., Schoch, S. F. & Kurth, S., 2023, In: PLoS ONE. 18, 10 , 15 p., e0291441.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Preliminary Screening of Bacterial and Fungal Communities from Spontaneous Fermentation of Durian Pulps (Tempoyak) Using High-throughput Amplicon Sequencing

    Musa, S. M., Kamal, S. S., Nielsen, Dennis Sandris & Ahmad, H. F., 2023, 3rd Symposium on Industrial Science and Technology, SISTEC 2021. Salim, N., Samah, N. A., Nazlan, R., Widia, M. & Sukadarin, E. H. (eds.). American Institute of Physics, 050010. (AIP Conference Proceedings, Vol. 2682).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  25. Published

    Reduced phosphatidylcholine level in the intestinal mucus layer of prediabetic NOD mice

    Mønsted, M. Ø., Bilgin, M., Kuzma, M., Pelantová, H., Pedersen, K., Tomášová, P., Nazmutdinova, A., Šedivá, B., Funda, D., Castro-Mejía, J. L., Holm, L. J., Nielsen, Dennis Sandris & Haupt-Jorgensen, M., 2023, In: APMIS - Journal of Pathology, Microbiology and Immunology. 131, 6, p. 237-248

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Soluble, Diferuloylated Corn Bran Glucuronoarabinoxylans Modulate the Human Gut Microbiota In Vitro

    Lin, S., Xu, X., Holck, J., Agger, J. W., Wilkens, C., Xie, Zhuqing, Khakimov, Bekzod, Nielsen, Dennis Sandris & Meyer, A. S., 2023, In: Journal of Agricultural and Food Chemistry. 71, 8, p. 3885-3897

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published
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