Flemming Ekelund

Flemming Ekelund

Associate Professor


  1. 2020
  2. Published

    Is wood ash amendment a suitable mitigation strategy for N2O emissions from soil?

    Bornø, Marie Louise, Rønn, Regin & Ekelund, Flemming, 15 Apr 2020, In : Science of the Total Environment. 713, p. 1-9 136581.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    AgNO3 sterilizes grains of barley (Hordeum vulgare) without inhibiting germination - a necessary tool for plant–microbiome research

    Munkager, Victoria, Vestergård, M., Priemé, Anders, Altenburger, A., de Visser, E., Johansen, Jesper Liengaard & Ekelund, Flemming, 2020, In : Plants. 9, 3, 16 p., 372.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Frivillige & Husdyr hjælper naturen

    Madsen, S. F., Strange, Niels, Schou, Jesper Sølver & Ekelund, Flemming, 2020, In : Aktuel Naturvidenskab. 2020, 3, p. 32-35 4 p.

    Research output: Contribution to journalJournal articleCommunication

  5. Published

    Soil bacterial community response to long-term land use conversion in Yellow River Delta

    He, H., Miao, Y., Gan, Y., Wei, S., Tan, S., Rask, K. A., Wang, L., Dai, J., Chen, W. & Ekelund, Flemming, 2020, In : Applied Soil Ecology. 156, 14 p., 103709.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil

    Bang-Andreasen, T., Anwar, M. Z., Lanzén, A., Kjøller, Rasmus, Rønn, Regin, Ekelund, Flemming & Jacobsen, C. S., 2020, In : FEMS Microbiology Ecology. 96, 3, 13 p., fiaa016.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2019
  8. Published

    Bacterial and protozoan dynamics upon thawing and freezing of an active layer permafrost soil

    Schostag, M., Priemé, Anders, Jacquiod, S., Russel, Jakob, Ekelund, Flemming & Jacobsen, C. S., 2019, In : ISME Journal. 13, p. 1345-1359

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Differences in arbuscular mycorrhizal colonisation influence cadmium uptake in plants

    Rask, K. A., Johansen, Jesper Liengaard, Kjøller, Rasmus & Ekelund, Flemming, 2019, In : Environmental and Experimental Botany. 162, p. 223-229 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Successional trophic complexity and biogeographical structure of eukaryotic communities in waterworks' rapid sand filters

    Harder, C. B., Albers, C. N., Rosendahl, Søren, Aamand, J., Ellegaard-Jensen, L. & Ekelund, Flemming, 2019, In : FEMS Microbiology Ecology. 95, 11, 13 p., fiz148.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Wood ash decreases cadmium toxicity to the soil nematode Caenorhabditis elegans

    Johansen, Jesper Liengaard, David, M., Ekelund, Flemming & Vestergård, M., 2019, In : Ecotoxicology and Environmental Safety. 172, p. 290-295

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Wood ash effects on growth and cadmium uptake in Deschampsia flexuosa (Wavy hair-grass)

    Kindtler, Nikolaj Lunding, Ekelund, Flemming, Rønn, Regin, Kjøller, Rasmus, Hovmand, Mads Frederik, Vestergård, M., Christensen, S. & Johansen, Jesper Liengaard, 2019, In : Environmental Pollution. p. 886-893 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. 2018
  14. Published

    Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes

    Heiss, A. A., Kolisko, M., Ekelund, Flemming, Brown, M. W., Roger, A. J. & Simpson, A. G. B., 2018, In : Royal Society Open Science. 5, 4, p. 1-13 171707.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples

    Jacobsen, C. S., Nielsen, Tue Kjærgaard, Vester, J. K., Stougaard, P., Nielsen, J. L., Voriskova, J., Winding, A., Baldrian, P., Liu, B., Frostegard, A., Pedersen, D., Tveit, A. T., Svenning, M. M., Tebbe, C. C., Ovreas, L., Jakobsen, P. B., Blazewicz, S. J., Hubablek, V., Bertilsson, S., Hansen, Lars Hestbjerg, Cary, S. C., Holben, W. E., Ekelund, Flemming & Bælum, J., 2018, In : Scientific Reports. 8, p. 1-6 6 p., 5711.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Recruitment of airborne microorganisms on sterilized soil at different heights above ground

    Fløistrup, K. M., Olsen, M. N., Rasmussen, T. G., Ekelund, Flemming & Altenburger, A., 2018, In : Applied Soil Ecology. 126, p. 85-87 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Soil protists: a fertile frontier in soil biology research

    Geisen, S., Mitchell, E. A. D., Adl, S., Bonkowski, M., Dunthorn, M., Ekelund, Flemming, Fernández, L. D., Jousset, A., Krashevska, V., Singer, D., Spiegel, F. W., Walochnik, J. & Lara, E., 2018, In : F E M S Microbiology Reviews. 42, 3, p. 293-323

    Research output: Contribution to journalReviewResearchpeer-review

  18. Published

    The relative importance of the bacterial pathway and soil inorganic nitrogen increase across an extreme wood-ash application gradient

    Vestergård, M., Bang-Andreasen, T., Buss, S. M., Cruz Paredes, C., Bentzon-Tilia, S., Ekelund, Flemming, Kjøller, Rasmus, Mortensen, Louise Hindborg & Rønn, Regin, 2018, In : GCB Bioenergy. 10, 5, p. 320-334 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Toxicity of cadmium and zinc to small soil protists

    Johansen, Jesper Liengaard, Rønn, Regin & Ekelund, Flemming, 2018, In : Environmental Pollution. 242, part B, p. 1510-1517

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. 2017
  21. Published

    Soil protistology rebooted: 30 fundamental questions to start with

    Geisen, S., Mitchell, E. A. D., Wilkinson, D. M., Adl, S., Bonkowski, M., Brown, M. W., Fiore-Donno, A. M., Heger, T. J., Jassey, V. E. J., Krashevska, V., Lahr, D. J. G., Marcisz, K., Mulot, M., Payne, R., Singer, D., Anderson, O. R., Charman, D. J., Ekelund, Flemming, Griffiths, B. S., Rønn, Regin, Smirnov, A., Bass, D., Belbahri, L., Berney, C., Blandenier, Q., Chatzinotas, A., Clarholm, M., Dunthorn, M., Feest, A., Fernández, L. D., Foissner, W., Fournier, B., Gentekaki, E., Hájek, M., Helder, J., Jousset, A., Koller, R., Kumar, S., La Terza, A., Lamentowicz, M., Mazei, Y., Santos, S. S., Seppey, C. V. W., Spiegel, F. W., Walochnik, J., Winding, A. & Lara, E., Aug 2017, In : Soil Biology & Biochemistry. 111, p. 94-103 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Wood ash application increases pH but does not harm the soil mesofauna

    Qin, J., Hovmand, Mads Frederik, Ekelund, Flemming, Rønn, Regin, Christensen, S., Groot, G. A. D., Mortensen, Louise Hindborg, Skov, Simon & Krogh, P. H., 2017, In : Environmental Pollution. 224, p. 581-589 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. 2016
  24. Published

    Local diversity of heathland Cercozoa explored by in-depth sequencing

    Harder, C. B., Rønn, Regin, Brejnrod, A. D., Bass, D., Abu Al-Soud, W. & Ekelund, Flemming, 2016, In : The ISME Journal. 10, 10, p. 2488-2497 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Temporal differentiation of soil communities in response to arable crop management strategies

    Coudrain, V., Hedde, M., Chauvat, M., Maron, P., Bourgeois, E., Mary, B., Léonard, J., Ekelund, Flemming, Villenave, C. & Recous, S., 2016, In : Agriculture, Ecosystems & Environment. 225, p. 12-21 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Turnover and isotopic fractionation of carbon from maize leaves as influenced by clay type and content in constructed soil media

    Yang, W., Bruun, Sander, Rønn, Regin, Ekelund, Flemming & Magid, Jakob, 2016, In : Biology and Fertility of Soils. 52, 4, p. 447-454 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. 2015
  28. Published

    Aminobacter MSH1-mineralisation of BAM in sand-filters depends on biological diversity

    Ekelund, Flemming, Harder, C. B., Knudsen, B. E. & Aamand, J., 2015, In : P L o S One. 10, 6, 14 p., e0128838.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Above-belowground interactions govern the course and impact of biological invasions

    Vestergård, M., Rønn, Regin & Ekelund, Flemming, 2015, In : A O B Plants. 7, 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Groundwater chemistry determines the prokaryotic community structure of waterworks sand filters

    Albers, C. N., Ellegaard-Jensen, L., Harder, C. B., Rosendahl, Søren, Knudsen, B. E., Ekelund, Flemming & Aamand, J., 2015, In : Environmental Science & Technology (Washington). 49, 2, p. 839-846 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Pesticide side effects in an agricultural soil ecosystem as measured by amoA expression quantification and bacterial diversity changes

    Feld, L., Hjelmsø, M. H., Nielsen, M. S., Jacobsen, A. D., Rønn, Regin, Ekelund, Flemming, Krogh, P. H., Strobel, Bjarne W. & Jacobsen, C. S., 2015, In : P L o S One. 10, 5, 20 p., e0126080.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. 2014
  33. Published

    Biological 12C-13C fractionation increases with increasing community-complexity in soil microcosms

    Yang, W., Magid, Jakob, Christensen, S., Rønn, Regin, Ambus, Per Lennart & Ekelund, Flemming, 2014, In : Soil Biology & Biochemistry. 69, p. 197-201 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Steam-treatment-based soil remediation promotes heat-tolerant, potentially pathogenic microbiota

    Altenburger, A., Bender, M., Ekelund, Flemming, Elmholt, S. & Jacobsen, C. S., 2014, In : Environmental Technology. 35, 6, p. 773–780 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Ultrastructure and Phylogenetic Position of Regin rotiferus and Otto terricolus Genera et Species Novae (Bicosoecida, Heterokonta/Stramenopiles)

    Harder, C. B., Ekelund, Flemming & Karpov, S. A., 2014, In : Protist. 165, 2, p. 144-160 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. 2013
  37. Published

    A three-gene phylogeny of the Mycena pura complex reveals 11 phylogenetic species and shows ITS to be unreliable for species identification

    Harder, C. B., Læssøe, Thomas, Frøslev, T. G., Ekelund, Flemming, Rosendahl, Søren & Kjøller, Rasmus, 2013, In : Fungal Biology. 117, 11-12, p. 764-775 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Using the sediment archive of living dinoflagellate cysts and other protist resting stages to study temporal population dynamics

    Ellegaard, M., dos Santos Ribeiro, S. I., Lundholm, Nina, Andersen, Thorbjørn Joest, Berge, T., Ekelund, Flemming, Härnström, K. & Godhe, A., 2013, Biological and geological perspectives of dinoflagellates. Lewis, J. M., Marret, F. & Bradley, L. R. (eds.). Geological Society, p. 149-153 5 p. (The Micropalaeontological Society, Special Publications, Vol. 5).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  39. 2012
  40. Published

    Disturbance promotes non-indigenous bacterial invasion in soil microcosms: analysis of the roles of resource availability and community structure

    Liu, M., Strandmark, L. B., Rønn, Regin, Christensen, S. & Ekelund, Flemming, 2012, In : P L o S One. 7, 10, p. 1-6 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Interactions between bacteria, protozoa and nematodes in soil

    Rønn, Regin, Madsen, M. V. & Ekelund, Flemming, 2012, In : Acta Protozoologica. 51, p. 223-235 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Nematodes and protozoa affect plants differently, depending on soil nutrient status

    Strandmark, L. B., Liu, M., Rønn, Regin, Christensen, S. & Ekelund, Flemming, 2012, In : European Journal of Soil Biology. 50, p. 28-31 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Significantly higher Carabid beetle (Coleoptera: Carabidae) catch in conventionally than in organically managed Christmas tree plantations

    Bagge, S., Lund, M., Rønn, Regin, Thomsen, P. F. & Ekelund, Flemming, 2012, In : Journal of Entomological Science. 47, 2, p. 110-124 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. 2011
  45. Published

    Buried alive – germination of up to a century-old marine protist resting stages

    Lundholm, Nina, dos Santos Ribeiro, S. I., Andersen, Thorbjørn Joest, Koch, T. A., Godhe, A., Ekelund, Flemming & Ellegaard, M., 2011, In : Phycologia. 50, 6, p. 629-640 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Phylogenomic analysis of kinetoplastids supports that trypanosomatids arose from within bodonids

    Deschamps, P., Lara, E., Marande, W., López-García, P., Ekelund, Flemming & Moreira, D., 2011, In : Molecular Biology and Evolution. 28, 1, p. 53-58 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Protozoan growth rates on secondary-metabolite-producing Pseudomonas spp. correlate with high-level protozoan taxonomy

    Pedersen, A. L., Winding, A., Altenburger, A. & Ekelund, Flemming, 2011, In : FEMS Microbiology Letters. 316, 1, p. 16-22 7 p.

    Research output: Contribution to journalLetterResearchpeer-review

  48. Published

    Starved bacteria retain their size but lose culturability - lessons from a 5000 years old undisturbed A-horizon

    Vestergård, M., Ekelund, Flemming, Winding, A., Jacobsen, C. S. & Christensen, S., 2011, In : Soil Biology & Biochemistry. 43, 6, p. 1379-1382 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  49. 2010
  50. Published

    Interaction of bacteria-feeding soil flagellates and Pseudomonas spp.

    Pedersen, A. L., Ekelund, Flemming, Johansen, A. & Winding, A., 2010, In : Biology and Fertility of Soils. 46, 2, p. 151-158

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Protozoa and their bacterial prey colonize sterile soil fast

    Altenburger, A., Ekelund, Flemming & Jacobsen, C. S., 2010, In : Soil Biology & Biochemistry. 42, 9, p. 1636-1639 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. 2009
  53. Published

    Bacterial Feeders, the Nematode Caenorhabditis elegans and the Flagellate Cercomonas longicauda, have different Effects on Outcome of Competition among the Pseudomonas Biocontrol Strains CHA0 and DSS73.

    Pedersen, A., Nybroe, O., Winding, A., Ekelund, Flemming & Strandmark, L. B., 2009, In : Microbial Ecology. 57, 3, p. 501-509 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Species-specific effects of live roots and shoot litter on soil decomposer abundances do not forecast plant litter-nitrogen uptake

    Saj, S., Mikola, J. & Ekelund, Flemming, 2009, In : Oecologia. 161, 2, p. 331-41 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    The "soil microbial loop" is not always needed to explain protozoan stimulation of plants

    Ekelund, Flemming, Saj, S., Madsen, M. V., Bertaux, J. & Juha, M., 2009, In : Soil Biology & Biochemistry. 41, 11, p. 2336-2342 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. 2008
  57. Published

    If you don't need change, maybe you don't need sex.

    Ekelund, Flemming & Rønn, Regin, 2008, In : Nature. 453, 7195, p. 587

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    Legume defoliation affects rhizosphere decomposers, but not the uptake of organic matter N by a neighbouring grass

    Ekelund, Flemming, 2008, In : Plant and Soil. 311, p. 141-149

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    Long-term organic farming fosters below and aboveground biota: Implications for soil quality, biological control and productivity

    Birkhofer, K., Bezemer, T., Bloem, J., Bonkowski, M., Christensen, S., Ekelund, Flemming, Fließbach, A., Hedlund, K., Mikola, J., Robin, C., Mäder, P., Setälä, H., Tatin-Froux, F., Van der Putten, W. & Scheu, S., 2008, In : Soil Biology & Biochemistry. 40, 9

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. Published

    Long-term survival of dinoflagellate cysts in anoxic marine sediments.

    Ellegaard, M., Lundholm, Nina, Ribeiro, S., Ekelund, Flemming & Andersen, Thorbjørn Joest, 2008.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  61. Published

    Ribosomal RNA genes challenge the monophyly of the Hyalospheniidae (Amoebozoa: Arcellinida).

    Lara, E., Heger, T. J., Ekelund, Flemming, Lamentowicz, M. & Mitchell, E. A. D., 2008, In : Protist. 159, 2, p. 165-176 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Root-induced decomposer growth and plant N uptake are not positively associated among a set of grassland plants

    Saj, S., Mikola, J. & Ekelund, Flemming, 2008, In : Agriculture, Ecosystems & Environment. Applied Soil Ecology. 37, 3, p. 215-222

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. 2007
  64. Published

    Molecular comparison of cultivable protozoa from a pristine and a polycyclic aromatic hydrocarbon polluted site

    Lara, E., Berney, C., Ekelund, Flemming, Harms, H. & Chatzinotas, A., 2007, In : Soil Biology & Biochemistry. 39, 1, p. 139–148

    Research output: Contribution to journalJournal articleResearchpeer-review

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