Tom Gilbert
Professor
- 2022
- Published
- Published
Grey wolf genomic history reveals a dual ancestry of dogs
Bergström, A., Stanton, D. W. G., Taron, U. H., Frantz, L., Sinding, M. H. S., Ersmark, E., Pfrengle, S., Cassatt-Johnstone, M., Lebrasseur, O., Girdland-Flink, L., Fernandes, D. M., Ollivier, M., Speidel, L., Gopalakrishnan, S., Westbury, M. V., Ramos-Madrigal, J., Feuerborn, T. R., Reiter, E., Gretzinger, J., Münzel, S. C. & 61 others, , 2022, In: Nature. 607, 7918, p. 313-320Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Uncovering the genomic basis of an extraordinary plant invasion
Bieker, V. C., Battlay, P., Petersen, B., Sun, X., Wilson, J., Brealey, J. C., Bretagnolle, F., Nurkowski, K., Lee, C., Barreiro, F. S., Owens, G. L., Lee, J. Y., Kellner, F. L., van Boheeman, L., Gopalakrishnan, S., Gaudeul, M., Mueller-Schaerer, H., Lommen, S., Karrer, G., Chauvel, B. & 8 others, , 2022, In: Science Advances. 8, 34, 18 p., eabo5115.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
To bee, or not to bee? One leg is the question
Cavill, Emily Louisa, Liu, S., Zhou, X. & Gilbert, M Thomas P, 2022, In: Molecular Ecology Resources. 22, 5, p. 1868-1874 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genomic basis of the plant island syndrome in Darwin’s giant daisies
Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, , 2022, In: Nature Communications. 13, 13 p., 3729.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic insights into the secondary aquatic transition of penguins
Cole, T. L., Zhou, C., Fang, M., Pan, H., Ksepka, D. T., Fiddaman, S. R., Emerling, C. A., Thomas, D. B., Bi, X., Fang, Q., Ellegaard, M. R., Feng, S., Smith, A. L., Heath, T. A., Tennyson, A. J. D., Borboroglu, P. G., Wood, J. R., Hadden, P. W., Grosser, S., Bost, C. A. & 20 others, , 2022, In: Nature Communications. 13, 13 p., 3912.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient proteins resolve controversy over the identity of Genyornis eggshell
Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide re-sequencing reveals the adaptive potential of European ash (Fraxinus excelsior)
Doonan, J., Budde, K. B., Lobo, A., Kosawang, C., Verbylaite, R., Pliura, A., Ulaszewski, B., Thomas, K., Konrad, H., Jørgensen, H. J. L., Seegmüller, S., Liziniewicz, M., Cleary, M., Nemesio-Gorriz, M., Fussi, B., Kirisits, T., Gilbert, M. T. P., Martin, M., Heuertz, M., Kjær, E. D. & 1 others, , 2022, 7th IUFRO International Workshop on the Genetics of Tree-Parasite Interactions in Forestry: Book of abstracts: GTPI 2022. IUFRO, p. 49 1 p.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research
- Published
Genetic load and adaptive potential of a recovered avian species that narrowly avoided extinction
Femerling Romero, Maria Georgette, Oosterhout, C. V., Feng, S., Bristol, R. M., KU, thw266, Groombridge, J., Gilbert, M Thomas P & Morales Villegas, Hernan Eduardo, 2022, bioRxiv, 23 p.Research output: Working paper › Preprint › Research
- Published
The Australian dingo is an early offshoot of modern breed dogs
Field, M. A., Yadav, S., Dudchenko, O., Esvaran, M., Rosen, B. D., Skvortsova, K., Edwards, R. J., Keilwagen, J., Cochran, B. J., Manandhar, B., Bustamante, S., Rasmussen, J. A., Melvin, R. G., Chernoff, B., Omer, A., Colaric, Z., Chan, E. K. F., Minoche, A. E., Smith, T. P. L., Gilbert, M. T. P. & 5 others, , 2022, In: Science Advances. 8, 16, 14 p., eabm5944.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The era of reference genomes in conservation genomics
Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J. & 8 others, , 2022, In: Trends in Ecology and Evolution. 37, 3, p. 197-202 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Species-specific traits mediate avian demographic responses under past climate change
Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2022, bioRxiv, 24 p.Research output: Working paper › Preprint › Research
- Published
The population genomic legacy of the second plague pandemic
Gopalakrishnan, S., Ebenesersdóttir, S. S., Lundstrøm, I. K. C., Turner-Walker, G., Moore, K. H. S., Luisi, P., Margaryan, A., Martin, M. D., Ellegaard, M. R., Magnússon, Ó., Sigurðsson, Á., Snorradóttir, S., Magnúsdóttir, D. N., Laffoon, J. E., van Dorp, L., Liu, X., Moltke, I., Ávila-Arcos, M. C., Schraiber, J. G., Rasmussen, S. & 40 others, , 2022, In: Current Biology. 32, 21, p. 4743-4751.e6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Travel Tales of a Worldwide Weed: Genomic Signatures of Plantago major L. Reveal Distinct Genotypic Groups With Links to Colonial Trade Routes
Iwanycki Ahlstrand, N., Gopalakrishnan, S., Vieira, F. G., Bieker, V. C., Meudt, H. M., Dunbar-Co, S., Rothfels, C. J., Martinez-Swatson, K. A., Maldonado, C., Hassemer, G., Shipunov, A., Bowers, M. D., Gardner, E., Xu, M., Ghorbani, A., Amano, M., Grace, O. M., Pringle, J. S., Bishop, M., Manzanilla, V. & 18 others, , 2022, In: Frontiers in Plant Science. 13, 16 p., 838166.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and historical DNA in conservation policy
Jensen, E. L., Díez-del-Molino, D., Gilbert, M Thomas P, Bertola, Laura, Borges, F., Cubric-Curik, V., de Navascués, M., Frandsen, P., Heuertz, M., Hvilsom, C., Jiménez-Mena, B., Miettinen, A., Moest, M., Chrzanová Pecnerová, Patrícia, Barnes, I. & Vernesi, C., 2022, In: Trends in Ecology and Evolution. 37, 5, p. 420-429 10 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Enriching captivity conditions with natural elements does not prevent the loss of wild-like gut microbiota but shapes its compositional variation in two small mammals
Koziol, Adam Leslie, Larrañaga, Iñaki Odriozola, Jessen, Lasse Nyholm, Leonard, Aoife Mary, San Jose, C., Pauperio, J., Ferreira, C., Hansen, Anders Johannes, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Alberdi, Antton, 2022, In: MicrobiologyOpen. 11, 5, 19 p., e1318.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Earth BioGenome Project 2020: Starting the clock
Lewin, H. A., Richards, S., Aiden, E. L., Allende, M. L., Archibald, J. M., Bálint, M., Barker, K. B., Baumgartner, B., Belov, K., Bertorelle, G., Blaxter, M. L., Cai, J., Caperello, N. D., Carlson, K., Castilla-Rubio, J. C., Chaw, S. M., Chen, L., Childers, A. K., Coddington, J. A., Conde, D. A. & 65 others, , 2022, In: PNAS. 119, 4, 7 p., e2115635118.Research output: Contribution to journal › Review › Research › peer-review
- Published
Probing the genomic limits of de-extinction in the Christmas Island rat
Lin, J., Duchene, David, Carøe, C., Smith, O., Ciucani, M. M., Niemann, Jonas, Richmond, D., Greenwood, A. D., MacPhee, R., KU, thw266, Gopalakrishnan, Shyam & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 7, p. 1650-1656.e3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rhizosphere bacterial communities differ among traditional maize landraces
Lund, M., Rasmussen, Jacob Agerbo, Ramos Madrigal, Jazmin, Sawers, R., Gilbert, M Thomas P & Barnes, Christopher James, 2022, In: Environmental DNA. 4, 6, p. 1241-1249 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The potential of aquatic bloodfeeding and nonbloodfeeding leeches as a tool for iDNA characterisation
Lynggaard, Christina Islas, Oceguera-Figueroa, A., Kvist, S., Gilbert, M Thomas P & Bohmann, Kristine, 2022, In: Molecular Ecology Resources. 22, 2, p. 539-553 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extreme freeze-tolerance in cryophilic tardigrades relies on controlled ice formation but does not involve significant change in transcription: [Corrigendum]
Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Neves, R. C., Jørgensen, Aslak, Schiøtt, M., Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 271, 8 p., 111245.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome
Neves, R. C., Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
Patrono, L. V., Vrancken, B., Budt, M., Düx, A., Lequime, S., Boral, S., Gilbert, M. T. P., Gogarten, J. F., Hoffmann, L., Horst, D., Merkel, K., Morens, D., Prepoint, B., Schlotterbeck, J., Schuenemann, V. J., Suchard, M. A., Taubenberger, J. K., Tenkhoff, L., Urban, C., Widulin, N. & 6 others, , 2022, In: Nature Communications. 13, 9 p., 2314.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic evidence refutes the hypothesis that the Bornean banteng is a distinct species
Sun, Xin, Ciucani, M. M., Rasmussen, Jacob Agerbo, Gilbert, M Thomas P & Sinding, Mikkel Holger Strander, 2022, In: BMC Ecology and Evolution. 22, 4 p., 110.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics
Tous, N., Marcos, S., Goodarzi Boroojeni, F., Pérez de Rozas, A., Zentek, J., Estonba, A., Sandvang, D., Gilbert, M Thomas P, Esteve-Garcia, E., Finn, R., Alberdi, Antton & Tarradas, J., 2022, In: Frontiers in Physiology. 13, 14 p., 884925.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phylogenomics of the world's otters
de Ferran, V., Figueiró, H. V., Trindade, F. D. J., Smith, O., Sinding, Mikkel Holger Strander, Trinca, C. S., Lazzari, G. Z., Veron, G., Vianna, J. A., Barbanera, F., Kliver, S., Serdyukova, N., Bulyonkova, T., Ryder, O. A., Gilbert, M Thomas P, Koepfli, K. & Eizirik, E., 2022, In: Current Biology. 32, 16, p. 3650-3658.e4 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12980
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
Research output: Contribution to journal › Journal article › Research › peer-review
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5646
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Deep sequencing of RNA from ancient maize kernels
Research output: Contribution to journal › Journal article › Research › peer-review
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True single-molecule DNA sequencing of a pleistocene horse bone
Research output: Contribution to journal › Journal article › Research › peer-review
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