Dennis Sandris Nielsen

Dennis Sandris Nielsen

Professor

ORCID: 0000-0001-8121-1114

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  1. Published

    The Smallest Intestine (TSI) - a low volume in vitro model of the small intestine with increased throughput

    Cieplak, T., Wiese, M., Nielsen, S., Van De Wiele, T., van der Berg, Franciscus Winfried J & Nielsen, Dennis Sandris, 2018, In: FEMS Microbiology Letters. 365, 21, p. 1-8 fny231.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A bacteriophage cocktail targeting Escherichia coli reduces E. coli in simulated gut conditions, while preserving a non-targeted representative commensal normal microbiota

    Cieplak, T., Soffer, N., Sulakvelidze, A. & Nielsen, Dennis Sandris, 2018, In: Gut Microbes. 9, 5, p. 391-399 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    High-Quality Draft Genome Sequence of Lactobacillus casei Strain Z11, Isolated from a Human Adult Intestinal Biopsy Sample

    Coba, M. S. M., Marshall, I. P. G., Schreiber, L. & Nielsen, Dennis Sandris, 2017, In: Genome Announcements. 5, 28, 2 p., e00634-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food

    Compaoré, C. S., Nielsen, Dennis Sandris, Sawadogo-Lingani, H., Berner, T. S., Nielsen, K. F., Adimpong, D. B., Diawara, B., Ouédraogo, G. A., Jakobsen, M. & Thorsen, L., 2013, In: Journal of Applied Microbiology. 115, 1, p. 133-146 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from Bikalga, an African alkaline Hibiscus sabdariffa seedfermented condiment

    Compaoré, C. S., Nielsen, Dennis Sandris, Ouoba, L. I. I., Berner, T. S., Nielsen, K. F., Sawadogo-Lingani, H., Diawara, B., Ouédraogo, G. A., Jakobsen, M. & Thorsen, L., 2013, In: International Journal of Food Microbiology. 162, 3, p. 297-307 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Broad spectrum antimicrobial activity of Bacillus amyloliquefaciens strains isolated from traditional Bikalga, an African fermented food condiment

    Compaoré, C. S., Nielsen, Dennis Sandris, Sawadgo-Lingani, H., Berner, T. S., Nielsen, K. F., Adimpong, D. B., Diawara, B., Ouédraogo, G., Jakobsen, M. & Thorsen, L., 2012, Global issues in food microbiology: abstract book. p. 752 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  7. Published

    Influencing cocoa flavour using Pichia kluyveri and Kluyveromyces marxianus in a defined mixed starter culture for cocoa fermentation

    Crafack, M., Mikkelsen, M. B., Saerens, S., Knudsen, M., Blennow, Andreas, Lowor, S., Takrama, J., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2013, In: International Journal of Food Microbiology. 167, 1, p. 103-116 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Impact of starter cultures and fermentation techniques on the volatile aroma profile of chocolate

    Crafack, M., Petersen, Mikael Agerlin, Eskildsen, C. E. A., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2013. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  9. Published

    Use of pectinolytic and aromatic yeast in a mixed starter culture for cocoa fermentation with the aim of influencing the flavour profile of cocoa

    Crafack, M., Mikkelsen, M. B., Pedersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 3 Sep 2012. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  10. Published

    Altering the flavour profiles of cocoa using aromatic and pectinolytic yeasts in a mixed starter culture for cocoa fermentation

    Crafack, M., Mikkelsen, M. B., Pedersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2012. 1 p.

    Research output: Contribution to conference › Poster › Research

  11. Published

    Impact of starter cultures and fermentation techniques on the volatile aroma and sensory profile of chocolate

    Crafack, M., Keul, H., Eskildsen, C. E. A., Petersen, Mikael Agerlin, Saerens, S., Blennow, Andreas, Skovmand-Larsen, M., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2014, In: Food Research International. 63, Part C, p. 306–316 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Human fecal metabolome reflects differences in body mass index, physical fitness, and blood lipoproteins in healthy older adults

    Cui, M., Trimigno, A., Castro-Mejía, J. L., Reitelseder, S., Bülow, J., Bechshøft, R. L., Nielsen, Dennis Sandris, Holm, L., Engelsen, Søren Balling & Khakimov, Bekzod, 2021, In: Metabolites. 11, 11, 16 p., 717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Postnatal hematopoiesis and gut microbiota in NOD mice deviate from C57BL/6 mice

    Damlund, D. S. M., Metzdorff, S. B., Hasselby, Jane Preuss, Wiese, M., Lundsager, M. T., Nielsen, Dennis Sandris, Buschard, K. S., Hansen, Axel Kornerup & Frøkiær, Hanne, 2016, In: Journal of Diabetes Research. 2016, 15 p., 6321980.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Gastrointestinal toxicity during induction treatment for childhood acute lymphoblastic leukemia: the impact of the gut microbiota

    De Pietri, S., Ingham, A. C., Frandsen, T. L., Rathe, M., Krych, Lukasz, Castro-Mejía, J. L., Nielsen, Dennis Sandris, Nersting, J., Wehner, P. S., Schmiegelow, Kjeld, Hasle, H., Pamp, S. J. & Muller, Klaus, 2020, In: International Journal of Cancer. 147, 7, p. 1953-1962 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples

    Deng, Ling, Silins, R., Castro-Mejia, J. L., Kot, W., Jessen, L., Thorsen, J., Shah, S., Stokholm, Jakob, Bisgaard, H., Moineau, S. & Nielsen, Dennis Sandris, 2019, In: Viruses. 11, 7, 10 p., 667.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages

    Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Different microbiomes associated with the copepods Acartia tonsa and Temora longicornis from the same marine environment

    Dorosz, J. N. A., Castro Mejia, J. L., Hansen, L. H., Nielsen, Dennis Sandris & Skovgaard, A., 2016, In: Aquatic Microbial Ecology. 78, 1, p. 1-9 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Reducing the variation in animal models by standardizing the gut microbiota

    Ellekilde, M., Hufeldt, M. R., Hansen, Camilla Hartmann Friis, Bech-Nielsen, G. V., Nielsen, Dennis Sandris, Vogensen, Finn Kvist & Hansen, Axel Kornerup, May 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  19. Published

    CORRELATION BETWEEN GUT MICROBIOTA AND DEVELOPMENT OF GLUCOSE INTOLERANCE IN B6.V-Lepob/J LEPTIN DEFICIENT MICE

    Ellekilde, M., Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Hufeldt, M. R., Vogensen, Finn Kvist & Hansen, Axel Kornerup, Apr 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  20. Published

    Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters

    Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice

    Ellekilde, M., Selfjord, E. M., Larsen, C. S., Jakesevic, M., Rune, Ida, Christensen, B. T., Vogensen, Finn Kvist, Nielsen, Dennis Sandris, Bahl, M. I., Licht, T. R., Hansen, Axel Kornerup & Hansen, Camilla Hartmann Friis, 2014, In: Scientific Reports. 4, 8 p., 5922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Effect of inoculating C57BL/6NTac mice with different gut microbiotas on gut colonization and glucose tolerance

    Ellekilde, M., Viscardi, M., Rune, Ida, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 1 Nov 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  23. Published

    Good PhD pratice

    Ersbøll, A. K., Flensted-Jensen, M., Nielsen, A. B. & Nielsen, Dennis Sandris, 2005, In: Det Levende Universitet. 6, p. 3 1 p.

    Research output: Contribution to journal › Journal article › Communication

  24. Published

    Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese

    Fatemizadeh, S. S., Krych, Lukasz, Castro-Mejía, J. L., Stefanova, Denitsa Vladimirova, Kot, Witold, Najafi, M. B. H. & Nielsen, Dennis Sandris, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0047922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Sensitivity to oxazolone induced dermatitis is transferable with gut microbiota in mice

    Fisker, L., Krych, Lukasz, Engkilde, K., Nielsen, Dennis Sandris, Kot, W. P., Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2017, In: Scientific Reports. 7, 11 p., 44385.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota

    Svanberg Frisinger, Frida, Pirolo, Mattia, Ng, D. Y. K., Mao, Xiaotian, Nielsen, Dennis Sandris & Guardabassi, Luca, 2022, In: Pharmaceuticals. 15, 6, 731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Influenza A Virus Infection Alters Gut Microbiota Composition in Juvenile Mice

    Fuglsang, E., Krych, Lukasz, Nielsen, Dennis Sandris, Frøkiær, Hanne & Reading, P. C., 2018, In: Journal of Infectious Diseases & Travel Medicine. 2, 3, 10 p., 000118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Postnatal Administration of Lactobacillus rhamnosus HN001 Ameliorates Perinatal Broad-Spectrum Antibiotic-Induced Reduction in Myelopoiesis and T Cell Activation in Mouse Pups

    Fuglsang, E., Krych, Lukasz, Lundsager, M. T., Nielsen, Dennis Sandris & Frøkiær, Hanne, Nov 2018, In: Molecular Nutrition and Food Research. 62, 22, p. 1-12 1800510.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Changes in Gut Microbiota Prior to Influenza A Virus Infection Do Not Affect Immune Responses in Pups or Juvenile Mice

    Fuglsang, E., Pizzolla, A., Krych, Lukasz, Nielsen, Dennis Sandris, Brooks, A. G., Frøkiær, Hanne & Reading, P. C., 2018, In: Frontiers in Cellular and Infection Microbiology. 8, 16 p., 319.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Kombucha beverage from green, black and rooibos teas: a comparative study looking at microbiology, chemistry and antioxidant activity

    Gaggìa, F., Baffoni, L., Galiano, M., Nielsen, Dennis Sandris, Jakobsen, Rasmus Riemer, Castro-Mejía, J. L., Bosi, S., Truzzi, F., Musumeci, F., Dinelli, G. & Di Gioia, D., 2019, In: Nutrients. 11, 1, p. 1-22 1.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Lactic Acid Bacteria: Influence on intracellular pH in Mycobacterum avium subsp. paratubercolosis

    Gaggìa, F., Siegumfeldt, Henrik, Nielsen, Dennis Sandris, Biavati, B. & Jakobsen, M., 2008, Food Micro 2008: Evolving microbial food quality and safety: Programme and Abstracts Book. p. 138 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  32. Published

    Intracellular pH of Mycobacterium avium subsp. paratuberculosis following exposure to antimicrobial compounds monitored at the single cell level

    Gaggìa, F., Nielsen, Dennis Sandris, Biavati, B. & Siegumfeldt, Henrik, 2010, In: International Journal of Food Microbiology. 141, p. S188-S192 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee Apis mellifera spp. ruttneri

    Gaggìa, F., Jakobsen, Rasmus Riemer, Alberoni, D., Baffoni, L., Cutajar, S., Mifsud, D., Nielsen, Dennis Sandris & Di Gioia, D., 2023, In: Frontiers in Microbiology. 14, 15 p., 1127717.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Mælk, mikrobiota og underernæring

    Grenov, Benedikte, Nielsen, Dennis Sandris, Mølgaard, Christian, Michaelsen, Kim F. & Friis, Henrik, 20 Aug 2021, In: Maelkeritidende. 7, p. 18 1 p.

    Research output: Contribution to journal › Journal article › Communication

  35. Published

    A prebiotic intervention study in children with autism spectrum disorders (ASDs)

    Grimaldi, R., Gibson, G. R., Vulevic, J., Giallourou, N., Castro Mejia, J. L., Hansen, L. H., Gibson, E. L., Nielsen, Dennis Sandris & Costabile, A., 2018, In: Microbiome. 6, 13 p., 133.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Development of rodents with a controlled gut microbiota and low variation

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis, Ellekilde, M., Rune, Ida & Bech-Nielsen, G. V., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  37. Published

    Why should we consider monitoring the normal flora

    Hansen, Axel Kornerup, Hufeldt, M. R., Hansen, Camilla Hartmann Friis, Ellekilde, M., Nielsen, Dennis Sandris, Aasted, B. & Vogensen, Finn Kvist, Jun 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

  38. Published

    Characterizing the gut microbiota as a way to reduce the group size in rodent studies

    Hansen, Axel Kornerup, Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K. S., Lundberg, R., Ellekilde, M. & Nielsen, Dennis Sandris, 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  39. Published

    The impact of the gut microbiota on rodent models

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis, Ellekilde, M. & Bech-Nielsen, G. V., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  40. Published

    Handbook of laboratory animal bacteriology

    Hansen, Axel Kornerup & Nielsen, Dennis Sandris, 2015, 2. ed. Boca Raton, USA: CRC Press. 280 p.

    Research output: Book/Report › Book › Research › peer-review

  41. Published

    A review of applied aspects of dealing with gut microbiota impact on rodent models

    Hansen, Axel Kornerup, Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Camilla Hartmann Friis, 2015, In: ILAR Journal. 56, 2, p. 250-64 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Bacterial species to be considered in quality assurance of mice and rats

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Krych, Lukasz & Hansen, Camilla Hartmann Friis, 2019, In: Laboratory Animals. 53, 3, p. 281-291

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Impact of the gut microbiota on rodent models of human disease

    Hansen, Axel Kornerup, Hansen, Camilla Hartmann Friis, Krych, Lukasz & Nielsen, Dennis Sandris, 2014, In: World Journal of Gastroenterology. 20, 47, p. 17727-17736 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Petersson, H. O., Zachariassen, L. F., Vegge, A., Lauridsen, C., Kot, W., Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In: Diabetologia. 62, 9, p. 1689-1700

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Gluten-free diet reduces autoimmune diabetes mellitus in mice across multiple generations in a microbiota-independent manner

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Zachariassen, L. F., Mentzel, Caroline M. Junker, Laigaard, A., Krych, Lukasz, Nielsen, Dennis Sandris, Gobbi, Alex, Haupt-Jorgensen, M., Buschard, K. & Hansen, Axel Kornerup, 2022, In: Journal of Autoimmunity. 127, 102795.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Early life treatment with vancomycin reduces diabetes incidence in NOD mice

    Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Vogensen, Finn Kvist & Hansen, Axel Kornerup, Apr 2011.

    Research output: Contribution to conference › Poster › Research

  47. Published

    Gut microbiota regulates NKG2D ligand expression on intestinal epithelial cells

    Hansen, Camilla Hartmann Friis, Holm, T. L., Krych, Lukasz, Andresen, Lars, Nielsen, Dennis Sandris, Rune, Ida, Hansen, Axel Kornerup & Skov, Søren, 2013, In: European Journal of Immunology. 43, 2, p. 447-457 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Buschard, K. & Hansen, Axel Kornerup, 2012, In: Diabetologia. 55, 8, p. 2285-2294 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Patterns of early gut colonization shape future immune responses of the host

    Hansen, Camilla Hartmann Friis, Nielsen, Dennis Sandris, Kverka, M., Zakostelska, Z., Klimesova, K., Hudcovic, T., Tlaskalova-Hogenova, H. & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 3, p. e34043 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K., Metzdorff, S. B., Nellemann, C. L., Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Frøkiær, Hanne, Skov, Søren & Hansen, Axel Kornerup, 2014, In: Diabetes. 63, 8, p. 2821-2832 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 4224545