Jan Gorodkin

Jan Gorodkin

Professor

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    1. Published

      Semiautomated improvement of RNA alignments

      Andersen, E. S., Lind-Thomsen, A., Knudsen, B., Kristensen, S. E., Havgaard, Jakob Hull, Torarinsson, E., Larsen, N., Zwieb, C., Sestoft, P., Kjems, J. & Gorodkin, Jan, 2007, In: RNA: A publication of the RNA Society. 13, 11, p. 1850-1859 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Sequence and expression analysis of gaps in human chromosome 20

      Minocherhomji, S., Seemann, Ernst Stefan, Mang, Y., Elschich, Z., Bak, M., Hansen, C., Papadopoulos, N., Josefsen, K., Nielsen, Henrik, Gorodkin, Jan, Tommerup, Niels & Silahtaroglu, Asli, Aug 2012, In: Nucleic Acids Research. 40, 14, p. 6660-6672 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Sequence assembly

      Scheibye-Alsing, K., Hoffmann, S., Frankel, A. M., Jensen, P., Stadler, P. F., Mang, Y., Tommerup, Niels, Gilchrist, M. J., Hillig, A. N., Cirera, Susanna, Jørgensen, Claus Bøttcher, Fredholm, Merete & Gorodkin, Jan, 2009, In: Computational Biology and Chemistry. 33, 2, p. 121-136 16 p.

      Research output: Contribution to journal › Review › Research › peer-review

    4. Published

      Simultaneous DNA and RNA mapping of somatic mitochondrial mutations across diverse human cancers

      Stewart, J. B., Alaei-Mahabadi, B., Radhakrishnan, S., Samuelsson, T., Gorodkin, Jan, Gustafsson, C. M. & Larsson, E., Jun 2015, In: P L o S Genetics. 11, 6, 15 p., e1005333.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Single cell mapping the evolution of the spatial processing centre within the brain

      Ralbovszki, Dorottya Maria, Bertelsen, Mads Frost, Buchmann, Kurt, Mori, Yuki, Gorodkin, Jan, Hemberg, M., Seemann, Ernst Stefan, Khodosevich, Konstantin & Hall, Vanessa Jane, 1 May 2022.

      Research output: Contribution to conference › Poster › Communication

    6. Published

      Spatially conserved regulatory elements identified within human and mouse Cd247 gene using high-throughput sequencing data from the ENCODE project.

      Pundhir, Sachin, Hannibal, T. D., Bang-Berthelsen, C. H., Wegener, A. K., Pociot, Flemming, Holmberg, D. I. & Gorodkin, Jan, 2 May 2014, In: Gene. 545, 1, p. 80-87 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Special issue: Computational analysis of RNA structure and function

      Gorodkin, Jan, 2019, In: Genes. 10, 1, 3 p., 55.

      Research output: Contribution to journal › Editorial › Research

    8. Published

      Structural profiles of human miRNA families from pairwise clustering

      Kaczkowski, B., Þórarinsson, E., Reiche, K., Havgaard, Jakob Hull, Stadler, P. F. & Gorodkin, Jan, 2009, In: Bioinformatics. 25, 3, p. 291-294 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Structured RNAs and synteny regions in the pig genome

      Anthon, Christian, Tafer, H., Havgaard, Jakob Hull, Thomsen, B., Hedegaard, J., Seemann, Ernst Stefan, Pundhir, Sachin, Kehr, S., Bartschat, S., Nielsen, M., Nielsen, R. O., Fredholm, Merete, Stadler, P. F. & Gorodkin, Jan, 2014, In: BMC Genomics. 15, 27 p., 459.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. E-pub ahead of print

      Systematic analysis and characterization of long non-coding RNA genes in inflammatory bowel disease

      Velissari, R., Ilieva, M., Dao, J., Miller, H. E., Madsen, J. H., Gorodkin, Jan, Aikawa, M., Ishii, H. & Uchida, S., 2024, (E-pub ahead of print) In: Briefings in Functional Genomics.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 4356276