Jan Gorodkin
Professor
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RNA interactions in the 5' region of the HIV-1 genome
Damgaard, C. K., Andersen, E. S., Knudsen, B., Gorodkin, Jan & Kjems, J., 2004, In: Journal of Molecular Biology. 336, 2, p. 369-379 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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RNA-Seq Study on the Longissimus thoracis Muscle of Italian Large White Pigs Fed Extruded Linseed with or without Antioxidants and Polyphenols
Vegni, J., Sun, Y., Seemann, Ernst Stefan, Zappaterra, M., Davoli, R., Dall’Olio, S., Gorodkin, Jan & Zambonelli, P., 2023, In: Animals. 13, 7, 1187.Research output: Contribution to journal › Journal article › Research › peer-review
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RNAcentral: a hub of information for non-coding RNA sequences
The RNAcentral Constortium , T., Gorodkin, Jan & Seemann, Ernst Stefan, 2019, In: Nucleic Acids Research. 47, D1, p. D221–D229Research output: Contribution to journal › Journal article › Research › peer-review
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RNAcentral 2021: Secondary structure integration, improved sequence search and new member databases
Sweeney, B. A., Petrov, A. I., Ribas, C. E., Finn, R. D., Bateman, A., Szymanski, M., Karlowski, W. M., Seemann, S. E., Gorodkin, J., Cannone, J. J., Gutell, R. R., Kay, S., Marygold, S., Dos Santos, G., Frankish, A., Mudge, J. M., Barshir, R., Fishilevich, S., Chan, P. P., Lowe, T. M. & 26 others, , 2021, In: Nucleic Acids Research. 49, D1, p. D212-D220Research output: Contribution to journal › Journal article › Research › peer-review
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RNAscClust: Clustering RNA sequences using structure conservation and graph based motifs
Miladi, M., Junge, A., Costa, F., Seemann, Ernst Stefan, Havgaard, Jakob Hull, Gorodkin, Jan & Backofen, R., 2017, In: Bioinformatics. 33, 14, p. 2089-2096 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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RNAsnp: efficient detection of local RNA secondary structure changes induced by SNPs: efficient detection of local RNA secondary structure changes induced by SNPs
Radhakrishnan, S., Tafer, H., Seemann, Ernst Stefan, Hofacker, I. L., Stadler, P. F. & Gorodkin, Jan, 2013, In: Human Mutation. 34, 4, p. 546-556 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation
Panitz, F., Stengaard, H., Hornshøj, H., Gorodkin, J., Hedegaard, J., Cirera, S., Thomsen, B. S., Madsen, L. B., Høj, A., Vingborg, R., Zahn, B., Wang, X., Wang, X., Wernersson, R., Jørgensen, C. B., Scheibye-Knudsen, K., Arvin, T., Lumholdt, S., Sawera, M., Green, T. & 5 others, , 2007, In: Bioinformatics. 23, 13, p. i387-91 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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SNP-finding in pig mitochondrial ESTs
Scheibye-Alsing, K., Cirera, Susanna, Gilchrist, M. J., Fredholm, Merete & Gorodkin, Jan, 2008, In: Animal Genetics. 39, 2, p. 193-195 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
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SRPDB: Signal Recognition Particle Database
Rosenblad, M. A., Gorodkin, Jan, Knudsen, B., Zwieb, C. & Samuelsson, T., 2003, In: Nucleic Acids Research. 31, 1, p. 363-364 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Sandwich cortial lamination and single-cell analysis decodes the developing spatial processing system
Liu, Y., Bergmann, T. B., Lee, J., Pfisterer, U. G., Handfield, L-F., Mori, Y., Asenjo Martinez, A., Lisa Vargas, I., Seemann, E. S., Lee, J. T. H., Patikis, N., Peralvo Vidal, J. M., Pihl, M., Kornum, B. R., Thomsen, P. D., Hyttel, P., Witter, M., Khodosevich, K., Gorodkin, J., Hemberg, M. & 2 others, , 2019. 45 p.Research output: Contribution to conference › Paper › Communication
ID: 4356276
Most downloads
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2872
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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1379
downloads
454 pyrosequencing based transcriptome analysis of Zygaena filipendulae with focus on genes involved in biosynthesis of cyanogenic glucosides
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1306
downloads
Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites
Research output: Contribution to journal › Journal article › Research › peer-review
Published