Søren Brunak
Professor, head of research
Brunak Group
Blegdamsvej 3B
2200 København N
- 2023
- Published
A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories
Placido, Davide, Yuan, B., Hjaltelin, Jessica Xin, Zheng, C., Haue, Amalie Dahl, Chmura, Piotr Jaroslaw, Yuan, C., Kim, J., Umeton, R., Antell, G., Chowdhury, A., Franz, A., Brais, L., Andrews, E., Marks, D. S., Regev, A., Ayandeh, S., Brophy, M. T., Do, N. V., Kraft, P., Wolpin, B. M., Rosenthal, M. H., Fillmore, N. R., Brunak, Søren & Sander, C., 2023, In: Nature Medicine. 29, p. 1113-1122Research output: Contribution to journal › Journal article › peer-review
- E-pub ahead of print
Abnormal serum levels of magnesium, phosphate, and zinc in ICU patients—Characteristics, management, and outcomes: The WhyTrace cohort study
Vesterlund, G. K., Thorsen-Meyer, H. C., Møller, Morten Hylander, Brunak, Søren, Strøm, T., Perner, Anders & Kaas-Hansen, Benjamin Skov, 2023, (E-pub ahead of print) In: Acta Anaesthesiologica Scandinavica.Research output: Contribution to journal › Journal article › peer-review
- Published
Associations of ABO and Rhesus D blood groups with phenome-wide disease incidence: A 41-year retrospective cohort study of 482,914 patients
Bruun-Rasmussen, Peter, Dziegiel, Morten Hanefeld, Banasik, Karina, Johansson, Pär Ingemar & Brunak, Søren, 2023, In: eLife. 12, 17 p., e83116.Research output: Contribution to journal › Journal article › peer-review
- E-pub ahead of print
Cohort Profile: The Danish Blood Donor Study
Erikstrup, C., Sørensen, E., Nielsen, K. R., Bruun, M. T., Petersen, M. S., Rostgaard, K., Thørner, L. W., Larsen, M., Mikkelsen, S., Dinh, K. M., Schwinn, M., Rigas, A. S., Didriksen, M., Dowsett, J., von Stemann, J. H., Brodersen, T., Paulsen, I. W., Hindhede, L., Sækmose, S. G., Kaspersen, K. A., Boldsen, J. K., Kjerulff, B., Werge, Thomas, Brunak, Søren, Banasik, Karina, Hansen, Thomas Folkmann, Ullum, H., Hjalgrim, Henrik, Ostrowski, Sisse Rye & Pedersen, Ole Birger Vesterager, 2023, (E-pub ahead of print) In: International Journal of Epidemiology.Research output: Contribution to journal › Journal article › peer-review
- Published
Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models
Allesøe, R. L., Lundgaard, Agnete Troen, Hernandez Medina, Ricardo, Aguayo-Orozco, A., Johansen, Joachim, Nissen, Jakob Nybo, Brorsson, C., Mazzoni, G., Niu, Lili, Hernansanz Biel, Jorge, Brasas, V., Webel, Henry, Benros, Michael Eriksen, Pedersen, A. G., Chmura, Piotr Jaroslaw, Jacobsen, Ulrik Plesner, Mari, A., Koivula, R., Mahajan, A., Vinuela, A., Tajes, J. F., Sharma, S., Haid, M., Hong, M., Musholt, P. B., De Masi, F., Vogt, J., Pedersen, H. K., Gudmundsdottir, V., Jones, A., Kennedy, G., Bell, J., Thomas, E. L., Frost, G., Thomsen, Henrik S., Hansen, E., Hansen, T. H., drb459, drb459, Muilwijk, M., Blom, M. T., 't Hart, L. M., Pattou, F., Raverdy, V., Brage, S., Ridderstråle, M., Pedersen, Oluf Borbye, Hansen, Torben, Banasik, Karina, Rasmussen, Simon, Brunak, Søren & IMI-DIRECT consortium, I. C., 2023, In: Nature Biotechnology. 41, 3, p. 399–408 18 p.Research output: Contribution to journal › Journal article › peer-review
- Accepted/In press
Finding Ophthalmic Risk and Evaluating the Value of Eye exams and their predictive Reliability (FOREVER)—A cohort study in a Danish high street optician setting: Design and methodology
Freiberg, Josefine, Rovelt, Jens, Gazzard, G., la Cour, Morten, Kolko, Miriam, Torp‐Pedersen, C., Benn, Marianne, Brunak, Søren, la Cour, Morten, Tolstrup, J., Toft‐Petersen, A. P., Burgdorf, Kristoffer Sølvsten, Banasik, Karina, Chmura, Piotr Jaroslaw, Freiberg, Josefine, Rovelt, Jens, Thornit, D. N., Foster, P., Gazzard, G., Crabb, D. P., Viswanathan, A., Barman, Sarah, Owen, C. G. & Rudnicka, A. R., 2023, (Accepted/In press) In: Acta Ophthalmologica.Research output: Contribution to journal › Journal article › peer-review
- E-pub ahead of print
Genetic variants associated with syncope implicate neural and autonomic processes
Aegisdottir, H. M., Thorolfsdottir, R. B., Sveinbjornsson, G., Stefansson, O. A., Gunnarsson, B., Tragante, V., Thorleifsson, G., Stefansdottir, L., Thorgeirsson, T. E., Ferkingstad, E., Sulem, P., Norddahl, G., Rutsdottir, G., Banasik, Karina, Christensen, Alex Hørby, Mikkelsen, Christina, Pedersen, Ole Birger Vesterager, Brunak, Søren, Bruun, M. T., Erikstrup, C., Jacobsen, Rikke Louise, Nielsen, K. R., Sorensen, E., Frigge, M. L., Hjorleifsson, K. E., Ivarsdottir, E., Helgadottir, A., Gretarsdottir, S., Steinthorsdottir, V., Oddsson, A., Eggertsson, H. P., Halldorsson, G. H., Jones, D. A., Anderson, J. L., Knowlton, K. U., Nadauld, L. D., DBDS Genomic Consortium, D. B. D. S. G. C., Haraldsson, M., Thorgeirsson, G., Bundgård, Henning, Arnar, D. O., Thorsteinsdottir, U., Gudbjartsson, D. F., Ostrowsk, S. R., Holm, H. & Stefansson, K., 2023, (E-pub ahead of print) In: European Heart Journal. 12 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Genome-wide association meta-analysis of knee and hip osteoarthritis uncovers genetic differences between patients treated with joint replacement and patients without joint replacement
Henkel, C., Styrkársdóttir, U., Thorleifsson, G., Stefánsdóttir, L., Björnsdóttir, G., Banasik, Karina, Brunak, Søren, Erikstrup, C., Dinh, K. M., Hansen, Thomas Folkmann, Nielsen, K. R., Bruun, M. T., Dowsett, J., Brodersen, T., Thorgeirsson, T. E., Gromov, Kirill, Boesen, Mikael Ploug, Ullum, H., Ostrowski, Sisse Rye, Pedersen, Ole Birger Vesterager, Stefánsson, K., Troelsen, A. & DBDS Genomic Consortium, D. G. C., 2023, In: Annals of the Rheumatic Diseases. 82, p. 384-392Research output: Contribution to journal › Journal article › peer-review
- Published
Genome-wide meta-analysis identifies 93 risk loci and enables risk prediction equivalent to monogenic forms of venous thromboembolism
Ghouse, Jonas, Tragante, V., Ahlberg, G., Rand, S. A., Jespersen, J. B., Leinøe, E. B., Vissing, C. R., Trudsø, L., Jonsdottir, I., Banasik, Karina, Brunak, Søren, Ostrowski, Sisse Rye, Pedersen, Ole Birger Vesterager, Sørensen, E., Erikstrup, C., Bruun, M. T., Nielsen, K. R., Køber, Lars Valeur, Christensen, A. H., Iversen, Kasper, Jones, D., Knowlton, K. U., Nadauld, L., Halldorsson, G. H., Ferkingstad, E., Olafsson, I., Gretarsdottir, S., Onundarson, P. T., Sulem, P., Thorsteinsdottir, U., Thorgeirsson, G., Gudbjartsson, D. F., Stefansson, K., Holm, H., Olesen, Morten Steen Salling & Bundgård, Henning, 2023, In: Nature Genetics. 55, p. 399-409 18 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Identification of biomarkers for glycaemic deterioration in type 2 diabetes
Slieker, R. C., Donnelly, L. A., Akalestou, E., Lopez-Noriega, L., Melhem, R., Güneş, A., Abou Azar, F., Efanov, A., Georgiadou, E., Muniangi-Muhitu, H., Sheikh, M., Giordano, G. N., Åkerlund, M., Ahlqvist, E., Ali, A., Banasik, Karina, Brunak, Søren, Barovic, M., Bouland, G. A., Burdet, F., Canouil, M., Dragan, I., Elders, P. J. M., Fernandez, C., Festa, A., Fitipaldi, H., Froguel, P., Gudmundsdottir, V., Gudnason, V., Gerl, M. J., van der Heijden, A. A., Jennings, L. L., Hansen, M. K., Kim, M., Leclerc, I., Klose, C., Kuznetsov, D., Mansour Aly, D., Mehl, F., Marek, D., Melander, O., Niknejad, A., Ottosson, F., Pavo, I., Duffin, K., Syed, S. K., Shaw, J. L., Cabrera, O., Pullen, T. J., Simons, K., Solimena, M., Suvitaival, T., Wretlind, A., Rossing, Peter, Lyssenko, V., Legido Quigley, C., Groop, L., Thorens, B., Franks, P. W., Lim, G. E., Estall, J., Ibberson, M., Beulens, J. W. J., 't Hart, L. M., Pearson, E. R. & Rutter, G. A., 2023, In: Nature Communications. 14, 18 p., 2533.Research output: Contribution to journal › Journal article › peer-review
ID: 12895347
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Identification of odorant-receptor interactions by global mapping of the human odorome
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2770
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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
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1161
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A human gut microbial gene catalogue established by metagenomic sequencing
Research output: Contribution to journal › Journal article › peer-review
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