Jan Gorodkin
Professor
- 2012
- Published
Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
Podolska, A., Anthon, Christian, Bak, M., Tommerup, Niels, Skovgaard, K., Heegaard, P. M., Gorodkin, Jan, Cirera, S. & Fredholm, Merete, Sep 2012, In: B M C Genomics. 13, 1, p. 459Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and expression analysis of gaps in human chromosome 20
Minocherhomji, S., Seemann, Ernst Stefan, Mang, Y., Elschich, Z., Bak, M., Hansen, C., Papadopoulos, N., Josefsen, K., Nielsen, Henrik, Gorodkin, Jan, Tommerup, Niels & Silahtaroglu, Asli, Aug 2012, In: Nucleic Acids Research. 40, 14, p. 6660-6672 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analyses of pig genomes provide insight into porcine demography and evolution
Groenen, M. A., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H-J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, , 2012, In: Nature. 491, 7424, p. 393-398 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM
Havgaard, Jakob Hull, Kaur, S. & Gorodkin, Jan, 2012, In: Current Protocols in Bioinformatics. 39, p. 12.11.1-12.11.15 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns
Langenberger, D., Pundhir, Sachin, Ekstrøm, Claus Thorn, Stadler, P. F., Hoffmann, S. & Gorodkin, Jan, 2012, In: Bioinformatics. 28, 1, p. 17-24 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs
Croft, L. J., Szklarczyk, D., Jensen, Lars Juhl & Gorodkin, Jan, 2012, In: B M C Systems Biology. 6, 1, p. 90Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RILogo: visualising RNA-RNA interactions
Menzel, K. P., Seemann, Ernst Stefan & Gorodkin, Jan, 2012, In: Bioinformatics. 28, 19, p. 2523-2526 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
RIsearch: fast RNA-RNA interaction search using a simplified nearest-neighbor energy model
Wenzel, Anne, Akbasli, E. & Gorodkin, Jan, 2012, In: Bioinformatics. 28, 21, p. 2738-2746 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain
Seemann, Ernst Stefan, Sunkin, S. M., Hawrylycz, M. J., Ruzzo, W. L. & Gorodkin, Jan, 2012, In: BMC Genomics. 13, 1, p. 214-227 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 4356276
Most downloads
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2870
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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1379
downloads
454 pyrosequencing based transcriptome analysis of Zygaena filipendulae with focus on genes involved in biosynthesis of cyanogenic glucosides
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1306
downloads
Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites
Research output: Contribution to journal › Journal article › Research › peer-review
Published