thw266 KU

thw266 KU

Professor, Affiliate Professor

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    ORCID: 0000-0001-6860-1521

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    1. Published

      On the origin and evolution of RNA editing in metazoans

      Zhang, P., Zhu, Y., Guo, Q., Li, J., Zhan, X., Yu, H., Xie, N., Tan, H., Lundholm, Nina, Garcia-Cuetos, L., Martin, M. D., Subirats, M. A., Su, Y., Ruiz-Trillo, I., Martindale, M. Q., Yu, J., Gilbert, M Thomas P, KU, thw266 & Li, Q., 2023, In: Cell Reports. 42, 2, 22 p., 112112.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Olfactory receptor subgenomes linked with broad ecological adaptations in sauropsida

      Khan, I., Yang, Z., Maldonado, E., Li, C., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D., O'Brien, S. J., Johnson, W. E. & Antunes, A., 2015, In: MOLECULAR BIOLOGY AND EVOLUTION . 32, 11, p. 2832-2843 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Neuroprotectants attenuate hypobaric hypoxia-induced brain injuries in cynomolgus monkeys

      Zhang, P., Chen, J-S., Li, Q-Y., Sheng, L-X., Gao, Y-X., Lu, B-Z., Zhu, W-B., Zhan, X-Y., Li, Y., Yuan, Z-B., Xu, G., Qiu, B-T., Yan, M., Guo, C-X., Wang, Y-Q., Huang, Y-J., Zhang, J-X., Liu, F-Y., Tang, Z-W., Lin, S-Z. & 7 others, Cooper, D. N., Yang, H., Wang, J., Gao, Y., Yin, W., KU, thw266 & Yan, G., 13 Dec 2019, In: Zoological research. 41, 1, p. 3-19 17 p.

      Research output: Contribution to journal › Review › Research › peer-review

    4. Published

      Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles

      Andreu-Sánchez, S., Chen, W., Stiller, Josefin & KU, thw266, 2021, In: GigaScience. 10, 1, 11 p., giaa161.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

      Fotaki, Anna Katerina, Denham, S. D., Mackie, Meaghan, Iraeta Orbegozo, Miren, Mylopotamitaki, Dorothea, Gopalakrishnan, Shyam, Sicheritz-Pontén, Thomas, Olsen, Jesper Velgaard, Cappellini, Enrico, KU, thw266, Christophersen, A., Gilbert, M Thomas P & Vågene, Åshild Joanne, 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 10 p., 20190584.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes

      You, X., Bian, C., Zan, Q., Xu, X., Liu, X., Chen, J., Wang, J., Qiu, Y., Li, W., Zhang, X., Sun, Y., Chen, S., Hong, W., Li, Y., Cheng, S., Fan, G., Shi, C., Liang, J., Tom Tang, Y., Yang, C. & 24 others, Ruan, Z., Bai, J., Peng, C., Mu, Q., Lu, J., Fan, M., Yang, S., Huang, Z., Jiang, X., Fang, X., KU, thw266, Zhang, Y., Polgar, G., Yu, H., Li, J., Liu, Z., Zhang, G., Ravi, V., Coon, S. L., Wang, J., Yang, H., Venkatesh, B., Wang, J. & Shi, Q., 2014, In: Nature Communications. 5, 5594, 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Molecular traces of alternative social organization in a termite genome

      Terrapon, N., Li, C., Robertson, H. M., Ji, L., Meng, X., Booth, W., Chen, Z., Childers, C. P., Glastad, K. M., Gokhale, K., Gowin, J., Gronenberg, W., Hermansen, R. A., Hu, H., Hunt, B. G., Huylmans, A. K., Khalil, S. M. S., Mitchell, R. D., Munoz-Torres, M. C., Mustard, J. A. & 23 others, Pan, H., Reese, J. T., Scharf, M. E., Sun, F., Vogel, H., Xiao, J., Yang, W., Yang, Z., Yang, Z., Zhou, J., Zhu, J., Brent, C. S., Elsik, C. G., Goodisman, M. A. D., Liberles, D. A., Roe, R. M., Vargo, E. L., Vilcinskas, A., Wang, J., Bornberg-Bauer, E., Korb, J., KU, thw266 & Liebig, J., 2014, In: Nature Communications. 5, 12 p., 3636.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Modes of genetic adaptations underlying functional innovations in the rumen

      Pan, X., Cai, Y., Li, Z., Chen, X., Heller, R., Wang, N., Wang, Y., Zhao, C., Wang, Y., Xu, H., Li, S., Li, M., Li, C., Hu, S., Li, H., Wang, K., Chen, L., Wei, B., Zheng, Z., Fu, W. & 20 others, Yang, Y., Zhang, T., Hou, Z., Yan, Y., Lv, X., Sun, W., Li, X., Huang, S., Liu, L., Mao, S., Liu, W., Hua, J., Li, Z., KU, thw266, Chen, Y., Wang, X., Qiu, Q., Dalrymple, B. P., Wang, W. & Jiang, Y., 2021, In: Science China Life Sciences. 64, 1, p. 1-21 21 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

      Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, Mattiangeli, V., Perri, A. R., Plekhanov, A. V., Ramos Madrigal, Jazmin, Schmidt, A. L., Shaymuratova, D., Smith, O., Yavorskaya, L. V., KU, thw266, Willerslev, Eske, Meldgaard, Morten, Gilbert, M Thomas P, Larson, G., Dalén, L., Hansen, Anders Johannes, Sinding, Mikkel Holger Strander & Frantz, L., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Mitogenomes Uncover Extinct Penguin Taxa and Reveal Island Formation as a Key Driver of Speciation

      Cole, T. L., Ksepka, D. T., Mitchell, K. J., Tennyson, A. J. D., Thomas, D. B., Pan, H., KU, thw266, Rawlence, N. J., Wood, J. R., Bover, P., Bouzat, J. L., Cooper, A., Fiddaman, S. R., Hart, T., Miller, G., Ryan, P. G., Shepherd, L. D., Wilmshurst, J. M. & Waters, J. M., 2019, In: MOLECULAR BIOLOGY AND EVOLUTION . 36, 4, p. 784-797 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Low frequency of paleoviral infiltration across the avian phylogeny

      Cui, J., Zhao, W., Huang, Z., Jarvis, E. D., Gilbert, M Thomas P, Walker, P. J., Holmes, E. C. & KU, thw266, 2014, In: Genome Biology (Online Edition). 15, 12, 13 p., 539.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Lineage-specific accelerated sequences underlying primate evolution

      Bi, X., Zhou, L., Zhang, J., Feng, S., Hu, M., Cooper, D. N., Lin, J., Li, J., Wu, D. & KU, thw266, 2023, In: Science Advances. 9, 22, 12 p., eadc9507.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

      Chen, L., Qin, Q., Jiang, Y., Wang, K., Lin, Z., Li, Z., Bibi, F., Yang, Y., Wang, J., Nie, W., Su, W., Liu, G., Li, Q., Fu, W., Pan, X., Liu, C., Yang, J., Zhang, C., Yin, Y., Wang, Y. & 32 others, Zhao, Y., Zhang, C., Wang, Z., Qin, Y., Liu, W., Wang, B., Ren, Y., Zhang, R., Zeng, Y., Rodrigues da Fonseca, Rute Andreia, Wei, B., Li, R., Wan, W., Zhao, R., Zhu, W., Wang, Y., Duan, S., Gao, Y., Zhang, Y. E., Chen, C., Hvilsom, C., Epps, C. W., Chemnick, L. G., Doug, Y., Mirarab, S., Siegismund, Hans Redlef, Ryder, O. A., Gilbert, M Thomas P, Lewin, H. A., KU, thw266, Heller, Rasmus & Wang, W., 2019, In: Science. 364, 6446, p. 1152-

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Large-scale genomic analysis reveals the genetic cost of chicken domestication

      Wang, M-S., Zhang, J-J., Guo, X., Li, M., Meyer, R., Ashari, H., Zheng, Z-Q., Wang, S., Peng, M-S., Jiang, Y., Thakur, M., Suwannapoom, C., Esmailizadeh, A., Hirimuthugoda, N. Y., Zein, M. S. A., Kusza, S., Kharrati-Koopaee, H., Zeng, L., Wang, Y-M., Yin, T-T. & 23 others, Yang, M., Li, M., Lu, X., Lasagna, E., Ceccobelli, S., Gunwardana, H. G. T. N., Senasig, T. M., Feng, S., Zhang, H., Bhuiyan, A. K. F. H., Khan, M. S., Silva, G. L. L. P., Thuy, L. T., Mwai, O. A., Ibrahim, M. N. M., KU, thw266, Qu, K., Hanotte, O., Shapiro, B., Bosse, M., Wu, D., Han, J. & Zhang, Y., 2021, In: BMC Biology. 19, 16 p., 118.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Labour classified by cervical dilatation & fetal membrane rupture demonstrates differential impact on RNA-seq data for human myometrium tissues

      Lai, P. F., Lei, K., Zhan, X., Sooranna, G., Li, J. K. H., Georgiou, E. X., Das, A., Singh, N., Li, Q., Stanfield, Z., KU, thw266, Tribe, R. M., Mesiano, S. & Johnson, M. R., 2021, In: PLoS ONE. 16, 11, 22 p., e0260119.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Initiation of the Primate Genome Project

      Wu, D., Qi, X., Yu, L., Li, M., Liu, Z., Yoder, A. D., Roos, C., Hayakawa, T., Rogers, J., Marques-Bonet, T., Su, B., Yao, Y., Zhang, Y. & KU, thw266, 2022, In: Zoological research. 43, 2, p. 147-149 3 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    17. Published

      Incomplete lineage sorting and phenotypic evolution in marsupials

      Feng, S., Bai, M., Rivas-González, I., Li, C., Liu, S., Tong, Y., Yang, H., Chen, G., Xie, D., Sears, K. E., Franco, L. M., Gaitan-Espitia, J. D., Nespolo, R. F., Johnson, W. E., Yang, H., Brandies, P. A., Hogg, C. J., Belov, K., Renfree, M. B., Helgen, K. M. & 3 others, Boomsma, Jacobus J., Schierup, M. H. & KU, thw266, 2022, In: Cell. 185, 10, p. 1646-1660.e18

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. In-Depth Tanscriptomic Analysis on Giant Freshwater Prawns

      Mohd-Shamsudin, M. I., Kang, Y., Lili, Z., Tan, T. T., Kwong, Q. B., Liu, H., KU, thw266, Othman, R. Y. & Bhassu, S., 2013, In: PLoS ONE. 8, 5, 14 p., e60839.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Improving the ostrich genome assembly using optical mapping data

      Zhang, J., Li, C., Zhou, Q. & KU, thw266, 2015, In: GigaScience. 4, 3 p., 24.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Identification of constrained sequence elements across 239 primate genomes

      Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J. & 72 others, Rouselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S., Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J. G., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., KU, thw266, Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A. D., Guschanski, K., Schierup, M. H., Beck, R. M. D., Karakikes, I., Wang, K. C., Umapathy, G., Roos, C., Boubli, J. P., Siepel, A., Kundaje, A., Paten, B., Lindblad-Toh, K., Rogers, J., Marques Bonet, T. & Farh, K. K. H., 2024, In: Nature. 625, p. 735–742 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Identification and evolution of avian endogenous foamy viruses

      Chen, Y., Wei, X., KU, thw266, Holmes, E. C. & Cui, J., 2019, In: Virus Evolution. 5, 2, 6 p., vez049.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Identification and characterization of insect-specific proteins by genome data analysis

      KU, thw266, Wang, H., Shi, J., Wang, X., Zheng, H., Wong, G. K., Clark, T., Wang, W., Wang, J. & Kang, L., 2007, In: B M C Genomics. 8, 11 p., 93.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      How genomics can help biodiversity conservation

      The European Reference Genome Atlas Consortium, T. E. R. G. A. C., 2023, In: Trends in Genetics. 39, 7, 15 p.

      Research output: Contribution to journal › Review › Research › peer-review

    24. Published

      Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

      Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, Arias, C. F., Liu, S., Greenwood, A. D., Bertelsen, Mads Frost, White, N. E., Bunce, M., KU, thw266, Sicheritz-Ponten, T. & Gilbert, M Thomas P, 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)

      Sánchez-Barreiro, F., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Westbury, Michael Vincent, de Manuel, M., Margaryan, Ashot, Ciucani, M. M., Vieira, Filipe Garrett, Patramanis, Ioannis, Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, Thomas, Dalén, L., Ryder, O. A., KU, thw266, Marques-Bonet, T., Moodley, Y. & Gilbert, M Thomas P, 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 40294134