thw266 KU

thw266 KU

Professor, Affiliate Professor

Member of:


    1. 2020
    2. Published

      High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis

      Gao, Q., Xiong, Z., Larsen, Rasmus Stenbak, Zhou, L., Zhao, J., Ding, G., Zhao, R., Liu, C., Ran, H. & KU, thw266, 2020, In: GigaScience. 9, 12, 14 p., giaa143.

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

      Fotaki, Anna Katerina, Denham, S. D., Mackie, Meaghan, Iraeta Orbegozo, Miren, Mylopotamitaki, Dorothea, Gopalakrishnan, Shyam, Sicheritz-Pontén, Thomas, Olsen, Jesper Velgaard, Cappellini, Enrico, KU, thw266, Christophersen, A., Gilbert, M Thomas P & Vågene, Åshild Joanne, 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 10 p., 20190584.

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. Published

      Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros

      Lord, E., Dussex, N., Kierczak, M., Díez-del-Molino, D., Ryder, O. A., Stanton, D. W. G., Gilbert, M. T. P., Sánchez-Barreiro, F., Zhang, G., Sinding, M. H. S., Lorenzen, E. D., Willerslev, E., Protopopov, A., Shidlovskiy, F., Fedorov, S., Bocherens, H., Nathan, S. K. S. S., Goossens, B., van der Plicht, J., Chan, Y. L. & 10 others, Prost, S., Potapova, O., Kirillova, I., Lister, A. M., Heintzman, P. D., Kapp, J. D., Shapiro, B., Vartanyan, S., Götherström, A. & Dalén, L., 2020, In: Current Biology. 30, 19, p. 3871-3879, e1-e7 16 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Progressive Cactus is a multiple-genome aligner for the thousand-genome era

      Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., Zhang, G. & 1 others, Paten, B., 2020, In: Nature. 587, 7833, p. 246-251

      Research output: Contribution to journalJournal articleResearchpeer-review

    6. Published

      Rapid loss of endogenous DNA in pig bone buried in five different environments

      Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.

      Research output: Contribution to journalReviewResearchpeer-review

    7. Published

      The evolutionary history of extinct and living lions

      de Manuel, M., Barnett, R., Sandoval-Velasco, M., Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M-H. S., Mak, S. S. T., Caroe, C., Liu, S., Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K-P., Johnson, W. E., Antunes, A. & 9 others, Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      The gene expression network regulating queen brain remodeling after insemination and its parallel use in ants with reproductive workers

      Nagel, M., Qiu, Bitao, Brandenborg, L. E., Larsen, Rasmus Stenbak, Ning, D., Boomsma, Jacobus J. & KU, thw266, 2020, In: Science Advances. 6, 38, 17 p., eaaz5772.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Published

      The origin of domestication genes in goats

      Zheng, Z., Wang, X., Li, M., Li, Y., Yang, Z., Wang, X., Pan, X., Gong, M., Zhang, Y., Guo, Y., Wang, Y., Liu, J., Cai, Y., Chen, Q., Okpeku, M., Colli, L., Cai, D., Wang, K., Huang, S., Sonstegard, T. S. & 16 others, Esmailizadeh, A., Zhang, W., Zhang, T., Xu, Y., Xu, N., Yang, Y., Han, J., Chen, L., Lesur, J., Daly, K. G., Bradley, D. G., Heller, Rasmus, KU, thw266, Wang, W., Chen, Y. & Jiang, Y., 2020, In: Science Advances. 6, 21, eaaz5216.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. 2021
    11. Published

      Callithrix jacchus (the common marmoset)

      Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.

      Research output: Contribution to journalLetterResearchpeer-review

    12. Published

      A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals

      Li, J., Zhang, J., Liu, J., Zhou, Y., Cai, C., Xu, L., Dai, X., Feng, S., Guo, C., Rao, J., Wei, K., Jarvis, E. D., Jiang, Y., Zhou, Z., KU, thw266 & Zhou, Q., 2021, In: GigaScience. 10, 1, 15 p., giaa142.

      Research output: Contribution to journalJournal articleResearchpeer-review

    13. Published

      A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes

      Liu, J., Wang, Z., Li, J., Xu, L., Liu, J., Feng, S., Guo, C., Chen, S., Ren, Z., Rao, J., Wei, K., Chen, Y., Jarvis, E. D., KU, thw266 & Zhou, Q., 2021, In: Genome Research. 31, 3, p. 497-511 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    14. Published

      African lungfish genome sheds light on the vertebrate water-to-land transition

      Wang, K., Wang, J., Zhu, C., Yang, L., Ren, Y., Ruan, J., Fan, G., Hu, J., Xu, W., Bi, X., Zhu, Y., Song, Y., Chen, H., Ma, T., Zhao, R., Jiang, H., Zhang, B., Feng, C., Yuan, Y., Gan, X. & 16 others, Li, Y., Zeng, H., Liu, Q., Zhang, Y., Shao, F., Hao, S., Zhang, H., Xu, X., Liu, X., Wang, D., Zhu, M., KU, thw266, Zhao, W., Qiu, Q., He, S. & Wang, W., 2021, In: Cell. 184, 5, p. 1362-1376.e18 33 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    15. Published

      Ancestral developmental potentials in early bony fish contributed to vertebrate water-to-land transition

      Bi, X. & KU, thw266, 2021, In: Zoological research. 42, 2, p. 135-137 3 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    16. Published

      Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

      Liu, S., Westbury, M. V., Dussex, N., Mitchell, K. J., Sinding, M. H. S., Heintzman, P. D., Duchêne, D. A., Kapp, J. D., von Seth, J., Heiniger, H., Sánchez-Barreiro, F., Margaryan, A., André-Olsen, R., De Cahsan, B., Meng, G., Yang, C., Chen, L., van der Valk, T., Moodley, Y., Rookmaaker, K. & 19 others, Bruford, M. W., Ryder, O., Steiner, C., Sonsbeek, L. G. R. B., Vartanyan, S., Guo, C., Cooper, A., Kosintsev, P., Kirillova, I., Lister, A. M., Marques-Bonet, T., Gopalakrishnan, Shyam, Dunn, Rob, Lorenzen, Eline, Shapiro, B., KU, thw266, Antoine, P. O., Dalén, L. & Gilbert, M Thomas P, 2021, In: Cell. 184, 19, p. 4874-4885.e16

      Research output: Contribution to journalJournal articleResearchpeer-review

    17. Published

      Dynamic evolution of transposable elements, demographic history, and gene content of paleognathous birds

      Wang, Z., Chen, G., KU, thw266 & Zhou, Q., 2021, In: Zoological Research. 42, 1, p. 51-61 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    18. Published

      Evolutionary and biomedical insights from a marmoset diploid genome assembly

      Yang, C., Zhou, Y., Marcus, S., Formenti, G., Bergeron, L. A., Song, Z., Bi, X., Bergman, J., Rousselle, M. M. C., Zhou, C., Zhou, L., Deng, Y., Fang, M., Xie, D., Zhu, Y., Tan, S., Mountcastle, J., Haase, B., Balacco, J., Wood, J. & 13 others, Chow, W., Rhie, A., Pippel, M., Fabiszak, M. M., Koren, S., Fedrigo, O., Freiwald, W. A., Howe, K., Yang, H., Phillippy, A. M., Schierup, M. H., Jarvis, E. D. & KU, thw266, 2021, In: Nature. 594, p. 227-233

      Research output: Contribution to journalJournal articleResearchpeer-review

    19. Published

      Evolutionary history of the extinct Sardinian dhole

      Ciucani, M. M., Jensen, J. K., Sinding, M. S., Smith, O., Lucenti, S. B., Rosengren, E., Rook, L., Tuveri, C., Arca, M., Cappellini, Enrico, Galaverni, M., Randi, E., Guo, C., KU, thw266, Sicheritz-Pontén, Thomas, Dalén, L., Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2021, In: Current Biology. 31, 24, p. 5571-5579.e6 16 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    20. Published

      Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication

      Puetz, Lara Christine, Delmont, T. O., Aizpurua Arrieta, Ostaizka, Guo, C., KU, thw266, Katajamaa, R., Jensen, P. & Gilbert, M Thomas P, 2021, In: Advanced Genetics. 2, 4, 12 p., 2100018.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Published

      Hairs distinguish castes and sexes: identifying the early ontogenetic building blocks of a fungus-farming superorganism (Hymenoptera: Formicidae)

      Adams, R. M. M., Larsen, Rasmus Stenbak, Stylianidi, N., Cheung, D., Qiu, Bitao, Murray, S. K., KU, thw266 & Boomsma, Jacobus J., 2021, In: Myrmecological News. 31, p. 201-216 16 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    22. Published

      Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)

      Sánchez-Barreiro, F., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Westbury, Michael Vincent, de Manuel, M., Margaryan, Ashot, Ciucani, M. M., Vieira, Filipe Garrett, Patramanis, Ioannis, Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, Thomas, Dalén, L., Ryder, O. A., KU, thw266, Marques-Bonet, T., Moodley, Y. & Gilbert, M Thomas P, 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    23. Published

      Labour classified by cervical dilatation & fetal membrane rupture demonstrates differential impact on RNA-seq data for human myometrium tissues

      Lai, P. F., Lei, K., Zhan, X., Sooranna, G., Li, J. K. H., Georgiou, E. X., Das, A., Singh, N., Li, Q., Stanfield, Z., KU, thw266, Tribe, R. M., Mesiano, S. & Johnson, M. R., 2021, In: PLoS ONE. 16, 11, 22 p., e0260119.

      Research output: Contribution to journalJournal articleResearchpeer-review

    24. Published

      Large-scale genomic analysis reveals the genetic cost of chicken domestication

      Wang, M-S., Zhang, J-J., Guo, X., Li, M., Meyer, R., Ashari, H., Zheng, Z-Q., Wang, S., Peng, M-S., Jiang, Y., Thakur, M., Suwannapoom, C., Esmailizadeh, A., Hirimuthugoda, N. Y., Zein, M. S. A., Kusza, S., Kharrati-Koopaee, H., Zeng, L., Wang, Y-M., Yin, T-T. & 23 others, Yang, M., Li, M., Lu, X., Lasagna, E., Ceccobelli, S., Gunwardana, H. G. T. N., Senasig, T. M., Feng, S., Zhang, H., Bhuiyan, A. K. F. H., Khan, M. S., Silva, G. L. L. P., Thuy, L. T., Mwai, O. A., Ibrahim, M. N. M., KU, thw266, Qu, K., Hanotte, O., Shapiro, B., Bosse, M., Wu, D., Han, J. & Zhang, Y., 2021, In: BMC Biology. 19, 16 p., 118.

      Research output: Contribution to journalJournal articleResearchpeer-review

    25. Published

      Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

      Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, Mattiangeli, V., Perri, A. R., Plekhanov, A. V., Ramos Madrigal, Jazmin, Schmidt, A. L., Shaymuratova, D., Smith, O., Yavorskaya, L. V., KU, thw266, Willerslev, Eske, Meldgaard, Morten, Gilbert, M Thomas P, Larson, G., Dalén, L., Hansen, Anders Johannes, Sinding, Mikkel Holger Strander & Frantz, L., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.

      Research output: Contribution to journalJournal articleResearchpeer-review

    26. Published

      Modes of genetic adaptations underlying functional innovations in the rumen

      Pan, X., Cai, Y., Li, Z., Chen, X., Heller, R., Wang, N., Wang, Y., Zhao, C., Wang, Y., Xu, H., Li, S., Li, M., Li, C., Hu, S., Li, H., Wang, K., Chen, L., Wei, B., Zheng, Z., Fu, W. & 20 others, Yang, Y., Zhang, T., Hou, Z., Yan, Y., Lv, X., Sun, W., Li, X., Huang, S., Liu, L., Mao, S., Liu, W., Hua, J., Li, Z., KU, thw266, Chen, Y., Wang, X., Qiu, Q., Dalrymple, B. P., Wang, W. & Jiang, Y., 2021, In: Science China Life Sciences. 64, 1, p. 1-21 21 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    27. Published

      Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles

      Andreu-Sánchez, S., Chen, W., Stiller, Josefin & KU, thw266, 2021, In: GigaScience. 10, 1, 11 p., giaa161.

      Research output: Contribution to journalJournal articleResearchpeer-review

    ID: 40294134