Nicolai Krogh

Nicolai Krogh

Assistant Professor

ORCID: 0000-0001-8870-7091

Publication year:
All
1 - 28 out of 28Page size: 500
  1. 2024
  2. Published

    GPATCH4 regulates rRNA and snRNA 2′-O-methylation in both DHX15-dependent and DHX15-independent manners

    Kanwal, N., Krogh, Nicolai, Memet, I., Lemus-Diaz, N., Thomé, C. C., Welp, L. M., Mizi, A., Hackert, P., Papantonis, A., Urlaub, H., Nielsen, Henrik, Bohnsack, K. E. & Bohnsack, M. T., 2024, In: Nucleic Acids Research. 52, 4, p. 1953-1974 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. 2023
  4. Published

    Loss of N-terminal acetyltransferase A activity induces thermally unstable ribosomal proteins and increases their turnover in Saccharomyces cerevisiae

    Hernández Guzmán, Ulises, Aksnes, H., Ree, R., Krogh, Nicolai, Jakobsson, M. E., Jensen, Lars Juhl, Arnesen, T. & Olsen, Jesper Velgaard, 2023, In: Nature Communications. 14, 4517.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Ribosomal RNA 2′-O-methylation dynamics impact cell fate decisions

    Häfner, Sophia Julia, Jansson, Martin David, Altinel, Kübra, Andersen, Kasper Langebjerg, Abay-Nørgaard, Zehra Caldwell, Ménard, Patrice, Fontenas, M., Sørensen, Daniel Madriz, Gay, David Michael, Arendrup, Frederic Schrøder, Tehler, D., Krogh, Nicolai, Nielsen, Henrik, Kraushar, M. L., Kirkeby, Agnete & Lund, Anders H., 2023, In: Developmental Cell. 58, 17, p. 1593-1609.e9

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. 2021
  7. Published

    Spatial-proteomics reveal in-vivo phospho-signaling dynamics at subcellular resolution

    Martinez Del Val, Ana, Bekker-Jensen, D. B., Steigerwald, S., Mehta, A., Tran, T., Sikorski, K., Torres Vega, Estefania, Kwasniewicz, E., Brynjólfsdóttir, S. H., Frankel, Lisa, Kjøbsted, Rasmus, Krogh, Nicolai, Lundby, Alicia, Bekker-Jensen, Simon Holst, Lund-Johansen, F. & Olsen, Jesper Velgaard, 2 Feb 2021, bioRxiv, p. 1-34, 34 p.

    Research output: Working paper › Preprint › Research

  8. Published

    Impaired Vitamin D Signaling in T Cells From a Family With Hereditary Vitamin D Resistant Rickets

    Al-Jaberi, F. A. H., Kongsbak-Wismann, Martin, Aguayo-Orozco, A., Krogh, Nicolai, Buus, Terkild Brink, Lopez, D. V., Rode, A. K. O., Gravesen, Eva, Ølgaard, Klaus, Brunak, Søren, Woetmann, Anders , Ødum, Niels, Bonefeld, Charlotte Menne & Geisler, Carsten, 2021, In: Frontiers in Immunology. 12, 11 p., 684015.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    RNA helicase-mediated regulation of snoRNP dynamics on pre-ribosomes and rRNA 2'-O-methylation

    Aquino, G. R. R., Krogh, Nicolai, Hackert, P., Martin, R., Gallesio, J. D., van Nues, R. W., Schneider, C., Watkins, N. J., Nielsen, Henrik, Bohnsack, K. E. & Bohnsack, M. T., 2021, In: Nucleic Acids Research. 49, 7, p. 4066-4084 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Regulation of translation by site-specific ribosomal RNA methylation

    Jansson, Martin David, Häfner, Sophia Julia, Altinel, Kübra, Tehler, D. E., Krogh, Nicolai, Jakobsen, Emil, Andersen, Jens Velde, Andersen, Kasper Langebjerg, Schoof, E., Ménard, Patrice, Nielsen, Henrik & Lund, Anders H., 2021, In: Nature Structural and Molecular Biology. 28, 11, p. 889-899

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Spatial-proteomics reveals phospho-signaling dynamics at subcellular resolution

    Martinez Del Val, Ana, Bekker-Jensen, D. B., Steigerwald, S., Koenig, Claire, Østergaard, Ole, Mehta, A., Tran, T., Sikorski, K., Torres Vega, Estefania, Kwasniewicz, E., Brynjólfsdóttir, S. H., Frankel, Lisa, Kjøbsted, Rasmus, Krogh, Nicolai, Lundby, Alicia, Bekker-Jensen, Simon Holst, Lund-Johansen, F. & Olsen, Jesper Velgaard, 2021, In: Nature Communications. 12, 1, 17 p., 7113.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The Lariat Capping Ribozyme

    Nielsen, Henrik, Krogh, Nicolai, Masquida, B. & Johansen, S. D., 2021, Ribozymes: Principles, Methods, Applications. Müller, S., Masquida, B. & Winkler, W. (eds.). Wiley, Vol. 2. p. 117-142

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  13. Published

    The RNA helicase Dbp7 promotes domain V/VI compaction and stabilization of inter-domain interactions during early 60S assembly

    Aquino, G. R. R., Hackert, P., Krogh, Nicolai, Pan, K. T., Jaafar, M., Henras, A. K., Nielsen, Henrik, Urlaub, H., Bohnsack, K. E. & Bohnsack, M. T., 2021, In: Nature Communications. 12, 6152.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The small Cajal body-specific RNA 15 (SCARNA15) directs p53 and redox homeostasis via selective splicing in cancer cells

    Beneventi, G., Munita, R., Cao Thi Ngoc, P., Madej, M., Cieśla, M., Muthukumar, S., Krogh, Nicolai, Nielsen, Henrik, Swaminathan, V. & Bellodi, C., 2021, In: NAR Cancer. 3, 3, zcab026.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Use of a Lariat Capping Ribozyme to Study Cap Function In Vivo

    Pietschmann, M., Tempel, G., Halladjian, Maral, Krogh, Nicolai & Nielsen, Henrik, 2021, Ribozymes: Methods and Protocols. Humana Press, Vol. 2167. p. 271-285 15 p. (Methods in Molecular Biology, Vol. 2167).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  16. 2020
  17. Published

    Profiling of ribose methylations in ribosomal RNA from diffuse large B-cell lymphoma patients for evaluation of ribosomes as drug targets

    Krogh, Nicolai, Asmar, F., Côme, Christophe Roger Michel, Fibiger Munch-Petersen, H., Grønbæk, Kirsten & Nielsen, Henrik, 4 Dec 2020, In: NAR Cancer. 2, 4, 11 p., zcaa035.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The shift from early to late types of ribosomes in zebrafish development involves changes at a subset of rRNA 2'-O-Me sites

    Ramachandran, S., Krogh, Nicolai, Jørgensen, T. E., Johansen, S. D., Nielsen, Henrik & Babiak, I., Dec 2020, In: R N A. 26, 12, p. 1919-1934 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Developmental changes of rRNA ribose methylations in the mouse

    Hebras, J., Krogh, Nicolai, Marty, V., Nielsen, Henrik & Cavaillé, J., 2020, In: RNA Biology. 17, 1, p. 150-164 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    RRP7A links primary microcephaly to dysfunction of ribosome biogenesis, resorption of primary cilia, and neurogenesis

    Farooq, M., Lindbæk, L., Krogh, N., Doganli, C., Keller, C., Mönnich, M., Gonçalves, A. B., Sakthivel, S., Mang, Y., Fatima, A., Andersen, V. S., Hussain, M. S., Eiberg, H., Hansen, L., Kjaer, K. W., Gopalakrishnan, J., Pedersen, L. B., Møllgård, K., Nielsen, H., Baig, S. M. & 3 others, Tommerup, Niels, Christensen, Søren Tvorup & Larsen, Lars Allan, 2020, In: Nature Communications. 11, 16 p., 5816.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Re-assessment of the involvement of snord115 in the serotonin 2c receptor pathway in a genetically relevant mouse model

    Hebras, J., Marty, V., Personnaz, J., Mercier, P., Krogh, Nicolai, Nielsen, Henrik, Aguirrebengoa, M., Seitz, H., Pradère, J., Guiard , B. P. & Cavaillé, J., 2020, In: eLife. 9, p. 1-34 34 p., e60862.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    ZAKα Recognizes Stalled Ribosomes through Partially Redundant Sensor Domains

    Vind, Anna Constance, Snieckute, Goda, Blasius, Melanie, Tiedje, C., Krogh, Nicolai, Bekker-Jensen, D. B., Andersen, Kasper Langebjerg, Nordgaard, C., Tollenaere, M. A. X., Lund, Anders H., Olsen, Jesper Velgaard, Nielsen, Henrik & Bekker-Jensen, Simon Holst, 2020, In: Molecular Cell. 78, 4, p. 700-713.E7

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. 2019
  24. Published

    Sequencing-based methods for detection and quantitation of ribose methylations in RNA

    Krogh, Nicolai & Nielsen, Henrik, 2019, In: Methods. 156, p. 5-15

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. 2018
  26. Published

    SIRT7-Dependent Deacetylation of Fibrillarin Controls Histone H2A Methylation and rRNA Synthesis during the Cell Cycle

    Iyer-Bierhoff, A., Krogh, Nicolai, Tessarz, P., Ruppert, T., Nielsen, Henrik & Grummt, I., 2018, In: Cell Reports. 25, 11, p. 2946-2954

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The No-Go and Nonsense-Mediated RNA Decay Pathways Are Regulated by Inflammatory Cytokines in Insulin-Producing Cells and Human Islets and Determine β-Cell Insulin Biosynthesis and Survival

    Ghiasi, S. M., Krogh, Nicolai, Tyrberg, B. & Mandrup-Poulsen, Thomas, 2018, In: Diabetes. 67, 10, p. 2019-2037 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. 2017
  29. Published

    RNA modifications contribute a new level of specialization to ribosomes and spliceosomes in yeast and human

    Krogh, Nicolai, 9 Nov 2017, Copenhagen University.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    Lariat capping as a tool to manipulate the 5' end of individual yeast mRNA species in vivo

    Krogh, Nicolai, Pietschmann, M., Schmid, M., Jensen, T. H. & Nielsen, Henrik, 2017, In: R N A. 23, 5, p. 683-695 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    RiboMeth-seq: Profiling of 2'-O-Me in RNA

    Krogh, Nicolai, Birkedal, U. & Nielsen, Henrik, 2017, RNA Methylation. Springer, Vol. 1562. p. 189-209 21 p. (Methods in Molecular Biology, Vol. 1562).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  32. Published

    Substoichiometric ribose methylations in spliceosomal snRNAs

    Krogh, Nicolai, Kongsbak-Wismann, Martin, Geisler, Carsten & Nielsen, Henrik, 2017, In: Organic and Biomolecular Chemistry. 15, 42, p. 8872-8876 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. 2016
  34. Published

    Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity

    Krogh, Nicolai, Jansson, Martin David, Häfner, Sophia Julia, Tehler, D., Birkedal, U., Christensen-Dalsgaard, M., Lund, Anders H. & Nielsen, Henrik, 19 Sep 2016, In: Nucleic Acids Research. 44, 16, p. 7884-7895

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Methods for Determination of 2′-O-Me in RNA

    Birkedal, U., Krogh, Nicolai, Andersen, Kasper Langebjerg & Nielsen, Henrik, 30 Jul 2016, Modified Nucleic Acids in Biology and Medicine. Jurga, S., Erdmann, V. A. & Barciszewski, J. (eds.). switzerland: Springer Science+Business Media, p. 187-205 (RNA Technologies).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  36. 2015
  37. Published

    Profiling of Ribose Methylations in RNA by High-Throughput Sequencing

    Birkedal, U., Christensen-Dalsgaard, M., Krogh, Nicolai, Radhakrishnan, S., Gorodkin, Jan & Nielsen, Henrik, 7 Jan 2015, In: Angewandte Chemie (International ed. in English). 54, 2, p. 451-455 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

ID: 32060428