Jonas Stenløkke Madsen
Assistant Professor
Microbiology
Universitetsparken 15
2100 København Ø
- 2024
- Published
Flagellar interference with plasmid uptake in biofilms: a joint experimental and modeling study
Røder, Henriette Lyng, Christidi, E., Amador Hierro, Cristina Isabel, Music, S., Olesen, Asmus Kalckar, Svensson, B., Madsen, Jonas Stenløkke, Herschend, J., Kreft, J. & Burmølle, Mette, 2024, In: Applied and Environmental Microbiology. 90, 1, 15 p., e01510-23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Horizontal transmission of a multidrug-resistant IncN plasmid isolated from urban wastewater
Yu, Z., Wang, Q., Pinilla Redondo, Rafael, Madsen, Jonas Stenløkke, Clasen, K. A. D., Ananbeh, H., Olesen, Asmus Kalckar, Gong, Zhuang, Yang, Nan, Dechesne, A., Smets, B., Nesme, Joseph & Sørensen, Søren Johannes, 2024, In: Ecotoxicology and Environmental Safety. 271, 12 p., 115971.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insights into the circular: The cryptic plasmidome and its derived antibiotic resistome in the urban water systems
Yu, Z., He, Wanli, Klincke, F., Madsen, Jonas Stenløkke, Kot, Witold, Hansen, Lars Hestbjerg, Quintela-Baluja, M., Balboa, S., Dechesne, A., Smets, B., Nesme, Joseph & Sørensen, Søren Johannes, 2024, In: Environment International. 183, 12 p., 108351.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
Yang, Q. E., Ma, X., Zeng, L., Wang, Q., Li, M., Teng, L., He, M., Liu, C., Zhao, M., Wang, M., Hui, D., Madsen, Jonas Stenløkke, Liao, H., Walsh, T. R. & Zhou, S., 2024, In: The Lancet Microbe. 5, 1, p. e13-e23 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Associational Resistance to Predation by Protists in a Mixed Species Biofilm
Goh, Y. F., Røder, Henriette Lyng, Chan, S. H., Ismail, M. H., Madsen, Jonas Stenløkke, Lee, K. W. K., Sørensen, Søren Johannes, Givskov, Michael, Burmølle, Mette, Rice, S. A. & McDougald, D., 2023, In: Applied and Environmental Microbiology. 89, 2, 16 p., e0174122.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacteriophages suppress CRISPR–Cas immunity using RNA-based anti-CRISPRs
Camara, Sarah, Mayo-Muñoz, D., Russel, J., Fagerlund, R. D., Madsen, Jonas Stenløkke, Fineran, P. C., Sørensen, Søren Johannes & Pinilla Redondo, Rafael, 2023, In: Nature. 623, 7987, p. 601-607 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conjugative plasmids inhibit extracellular electron transfer in Geobacter sulfurreducens
Fessler, M., Madsen, Jonas Stenløkke & Zhang, Y., 2023, In: Frontiers in Microbiology. 14, 12 p., 1150091.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cooperative antibiotic resistance facilitates horizontal gene transfer
Wang, Q., Wei, S., Silva, A. F. & Madsen, Jonas Stenløkke, 2023, In: ISME Journal. 17, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
An easily modifiable conjugative plasmid for studying horizontal gene transfer
Wang, Q., Olesen, Asmus Kalckar, Maccario, Lorrie & Madsen, Jonas Stenløkke, 2022, In: Plasmid. 123-124, 10 p., 102649.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids
Pinilla Redondo, Rafael, Russel, J., Mayo-Muñoz, D., Shah, S. A., Garrett, Roger Antony, Nesme, Joseph, Madsen, Jonas Stenløkke, Fineran, P. C. & Sørensen, Søren Johannes, 2022, In: Nucleic Acids Research. 50, 8, p. 4315-4328Research output: Contribution to journal › Journal article › Research › peer-review
- Published
IncHI1A plasmids potentially facilitate horizontal flow of antibiotic resistance genes to pathogens in microbial communities of urban residential sewage
Olesen, Asmus Kalckar, Pinilla Redondo, Rafael, Hansen, Mads Frederik, Russel, J., Dechesne, A., Smets, B. F., Madsen, Jonas Stenløkke, Nesme, Joseph & Sørensen, Søren Johannes, 2022, In: Molecular Ecology. 31, 5, p. 1595-1608Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial Interactions in Electroactive Biofilms for Environmental Engineering Applications: A Role for Nonexoelectrogens
Fessler, M., Madsen, Jonas Stenløkke & Zhang, Y., 2022, In: Environmental Science & Technology. 56, 22, p. 15273-15279 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unexpected diversity among small-scale sample replicates of defined plant root compartments
Attia, S., Russel, J., Mortensen, M. S., Madsen, Jonas Stenløkke & Sørensen, Søren Johannes, 2022, In: ISME Journal. 16, 4, p. 997-1003 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Biofilms can act as plasmid reserves in the absence of plasmid specific selection
Røder, Henriette Lyng, Trivedi, Urvish, Russel, J., Kragh, K. N., Herschend, J., Thalsø-Madsen, I., Tolker-Nielsen, Tim, Bjarnsholt, Thomas, Burmølle, Mette & Madsen, Jonas Stenløkke, 2021, In: npj Biofilms and Microbiomes. 7, 6 p., 78.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Kin discrimination promotes horizontal gene transfer between unrelated strains in Bacillus subtilis
Stefanic, P., Belcijan, K., Kraigher, B., Kostanjšek, R., Nesme, Joseph, Madsen, Jonas Stenløkke, Kovac, J., Sørensen, Søren Johannes, Vos, M. & Mandic-Mulec, I., 2021, In: Nature Communications. 12, 11 p., 3457.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lead Drives Complex Dynamics of a Conjugative Plasmid in a Bacterial Community
Cyriaque, V., Madsen, Jonas Stenløkke, Fievez, L., Leroy, B., Hansen, Lars Hestbjerg, Bureau, F., Sørensen, Søren Johannes & Wattiez, R., 2021, In: Frontiers in Microbiology. 12, 14 p., 655903.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Community-intrinsic properties enhance keratin degradation from bacterial consortia
Nasipuri, P., Herschend, J., Brejnrod, A. D., Madsen, Jonas Stenløkke, Espersen, R., Svensson, B., Burmølle, Mette, Jacquiod, S. & Sørensen, Søren Johannes, 2020, In: PLoS ONE. 15, 1, 26 p., e0228108.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Horizontal Transfer of Cyclic di-GMP Associated Genes: Theoretical Underpinnings and Future Perspectives
Madsen, Jonas Stenløkke, 2020, Microbial Cyclic Di-Nucleotide Signaling. Chou, S-H., Guiliani, N., Lee, V. T. & Römling, U. (eds.). Springer, p. 641-652 12 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Persistence and progression of staphylococcal infection in the presence of public goods
Trivedi, Urvish, Fell, C., Madsen, Jonas Stenløkke, Everett, J., Burmølle, Mette, Rumbaugh, K. P. & Sørensen, Søren Johannes, 2020, In: npj Biofilms and Microbiomes. 6, 5 p., 55.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasmids persist in a microbial community by providing fitness benefit to multiple phylotypes
Li, L., Dechesne, A., Madsen, Jonas Stenløkke, Nesme, Joseph, Sørensen, Søren Johannes & Smets, B. F., 2020, In: I S M E Journal. 14, 5, p. 1170-1181 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli
Anjum, M., Madsen, Jonas Stenløkke, Nesme, Joseph, Jana, B., Wiese, M., Jasinskyte, D., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Dalsgaard, Anders, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2019, In: Antimicrobial Agents and Chemotherapy. 63, 5, 13 p., e02528-18.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fluidic resistance control enables high-throughput establishment of mixed-species biofilms
Hansen, Mads Frederik, Meyer Torp, A., Madsen, Jonas Stenløkke, Røder, Henriette Lyng & Burmølle, Mette, 2019, In: BioTechniques. 66, 5, p. 235-239Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecies interactions reduce selection for a biofilm-optimized variant in a four-species biofilm model
Røder, Henriette Lyng, Liu, W., Sørensen, Søren Johannes, Madsen, Jonas Stenløkke & Burmølle, Mette, 2019, In: Environmental Microbiology Reports. 11, 6, p. 835-839 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Priority of Early Colonizers but No Effect on Cohabitants in a Synergistic Biofilm Community
Olsen, N. M. C., Røder, Henriette Lyng, Russel, J., Madsen, Jonas Stenløkke, Sørensen, Søren Johannes & Burmølle, Mette, 2019, In: Frontiers in Microbiology. 10, 8 p., 1949.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Staphylococcus aureus coagulases are exploitable yet stable public goods in clinically relevant conditions
Trivedi, Urvish, Madsen, Jonas Stenløkke, Everett, J., Fell, C., Russel, J., Haaber, J., Crosby, H. A., Horswill, A. R., Burmølle, Mette, Rumbaugh, K. P. & Sørensen, Søren Johannes, 11 Dec 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 50, p. E11771-E11779Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enhanced bacterial mutualism through an evolved biofilm phenotype
Røder, Henriette Lyng, Herschend, J., Russel, J., Andersen, M. F., Madsen, Jonas Stenløkke, Sørensen, Søren Johannes & Burmølle, Mette, 1 Nov 2018, In: I S M E Journal. 12, p. 2608-2618 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities
Anjum, M., Madsen, Jonas Stenløkke, Espinosa-Gongora, C., Jana, B., Wiese, M., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, Sep 2018, In: Journal of Microbiological Methods. 152, p. 18-26 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Estimating the Transfer Range of Plasmids Encoding Antimicrobial Resistance in a Wastewater Treatment Plant Microbial Community
Li, L., Dechesne, A., He, Z., Madsen, Jonas Stenløkke, Nesme, Joseph, Sørensen, Søren Johannes & Smets, B. F., 8 May 2018, In: Environmental Science & Technology Letters. 5, 5, p. 260-265 6 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
An intriguing relationship between the cyclic diguanylate signaling system and horizontal gene transfer
Madsen, Jonas Stenløkke, Hylling, Ole, Jacquiod, S. J. A., Pécastaings, S., Hansen, L. H., Riber, Leise, Vestergaard, G. A. & Sørensen, Søren Johannes, 2018, In: ISME Journal. 12, 9, p. 2330-2334 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial social interactions and the emergence of community-intrinsic properties
Madsen, Jonas Stenløkke, Sørensen, Søren Johannes & Burmølle, Mette, 2018, In: Current Opinion in Microbiology. 42, p. 104-109 6 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Micro-scale intermixing: a requisite for stable and synergistic co-establishment in a four-species biofilm
Liu, W., Russel, J., Burmølle, Mette, Sørensen, Søren Johannes & Madsen, Jonas Stenløkke, 2018, In: I S M E Journal. 12, p. 1940-1951 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Antagonism correlates with metabolic similarity in diverse bacteria
Russel, J., Røder, Henriette Lyng, Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 3 Oct 2017, In: Proceedings of the National Academy of Science of the United States of America. 114, 40, p. 10684-10688 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A post-planktonic era of in vitro infectious models: issues and changes addressed by a clinically relevant wound like media
Trivedi, Urvish, Madsen, Jonas Stenløkke, Rumbaugh, K. P., Wolcott, R. D., Burmølle, Mette & Sørensen, Søren Johannes, 2017, In: Critical Reviews in Microbiology. 43, 4, p. 453-465 12 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Low-abundant species facilitates specific spatial organization that promotes multispecies biofilm formation
Liu, W., Russel, J., Røder, Henriette Lyng, Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 2017, In: Environmental Microbiology. 19, 7, p. 2893-2905 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Whole-genome sequence of Pseudomonas fluorescens EK007-RG4, a promising biocontrol agent against a broad range of bacteria, including the fire blight bacterium Erwinia amylovora
Habibi, R., Tarighi, S., Behravan, J., Taheri, P., Kjøller, Annelise Helene, Brejnrod, A. D., Madsen, Jonas Stenløkke & Sørensen, Søren Johannes, 2017, In: Genome Announcements. 5, 13, 2 p., e00026-17.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
Coexistence facilitates interspecific biofilm formation in complex microbial communities
Madsen, Jonas Stenløkke, Røder, Henriette Lyng, Russel, J., Sørensen, Helle, Burmølle, Mette & Sørensen, Søren Johannes, 2016, In: Environmental Microbiology. 18, 8, p. 2565–2574Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific bacterial interactions are reflected in multispecies biofilm spatial organization
Liu, W., Røder, Henriette Lyng, Madsen, Jonas Stenløkke, Bjarnsholt, Thomas, Sørensen, Søren Johannes & Burmølle, Mette, 2016, In: Frontiers in Microbiology. 7, 8 p., 1366.Research output: Contribution to journal › Review › Research › peer-review
- Published
Type 3 fimbriae encoded on plasmids are expressed from a unique promoter without affecting host motility, facilitating an exceptional phenotype that enhances conjugal plasmid transfer
Madsen, Jonas Stenløkke, Riber, Leise, Kot, Witold, Basfeld, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: P L o S One. 11, 9, 19 p., e0162390.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation
Ren, D., Madsen, Jonas Stenløkke, Sørensen, Søren Johannes & Burmølle, Mette, 11 Jan 2015, In: ISME Journal. 9, p. 81-89 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Facultative control of matrix production optimizes competitive fitness in Pseudomonas aeruginosa PA14 biofilm models
Madsen, Jonas Stenløkke, Lin, Y. C., Squyres, G. R., Price-Whelan, A., Torio, A. D. S., Song, A., Cornell, W. C., Sørensen, Søren Johannes, Xavier, J. B. & Dietrich, L. E. P., 2015, In: Applied and Environmental Microbiology. 81, 24, p. 8414-8426 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Presence of Pathogenic bacteria and viruses in the daycare environment
Ibfelt, T., Engelund, E. H., Permin, A., Madsen, Jonas Stenløkke, Schultz, A. C. & Andersen, Leif Percival, 2015, In: Journal of Environmental Health. 78, 3, p. 24-29 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2014
- Published
High-throughput screening of multispecies biofilm formation and quantitative PCR-based assessment of individual species proportions, useful for exploring interspecific bacterial interactions
Ren, D., Madsen, Jonas Stenløkke, de la Cruz Perera, C. I., Bergmark, L., Sørensen, Søren Johannes & Burmølle, Mette, 2014, In: Microbial Ecology. 68, 1, p. 146-154 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sociomicrobiology: Bacterial Interactions and Biofilm Formation
Madsen, Jonas Stenløkke, 2014, Department of Biology, Faculty of Science, University of Copenhagen. 165 p.Research output: Book/Report › Ph.D. thesis › Research
- 2013
- Published
A spatiotemporal view of plasmid loss in biofilms and planktonic cultures: [plus] Erratum
Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 2013, In: Biotechnology and Bioengineering (Print). 110, 12, p. 3071-3074 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
The interconnection between biofilm formation and horizontal gene transfer
Madsen, Jonas Stenløkke, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Immunology and Medical Microbiology. 65, 2, p. 183-195 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility
Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- 2011
- Published
ID: 22973682
Most downloads
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355
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Interspecific bacterial interactions are reflected in multispecies biofilm spatial organization
Research output: Contribution to journal › Review › Research › peer-review
Published -
276
downloads
Type 3 fimbriae encoded on plasmids are expressed from a unique promoter without affecting host motility, facilitating an exceptional phenotype that enhances conjugal plasmid transfer
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
262
downloads
Whole-genome sequence of Pseudomonas fluorescens EK007-RG4, a promising biocontrol agent against a broad range of bacteria, including the fire blight bacterium Erwinia amylovora
Research output: Contribution to journal › Journal article › Research › peer-review
Published