Jette Bornholdt Lange

Jette Bornholdt Lange

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    1. Published

      A new class of genic nuclear RNA species in Arabidopsis

      van Wonterghem, M., Thieffry, A., Boyd, M., Lange, Jette Bornholdt & Brodersen, Peter, 2018, In: FEBS Letters. 592, 4, p. 631-643 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      An atlas of active enhancers across human cell types and tissues

      Andersson, R., Gebhard, C., Miguel-Escalada, I., Hoof, I., Lange, J. B., Boyd, M., Chen, Y., Zhao, X., Schmidl, C., Suzuki, T., Ntini, E., Arner, E., Valen, E., Li, K., Schwarzfischer, L., Glatz, D., Raithel, J., Lilje, B., Rapin, N., Bagger, F. O. & 30 others, Jørgensen, M., Andersen, P. R., Bertin, N., Rackham, O., Burroughs, A. M., Baillie, J. K., Ishizu, Y., Shimizu, Y., Furuhata, E., Maeda, S., Negishi, Y., Mungall, C. J., Meehan, T. F., Lassmann, T., Itoh, M., Kawaji, H., Kondo, N., Kawai, J., Lennartsson, A., Daub, C. O., Heutink, P., Hume, D. A., Jensen, T. H., Suzuki, H., Hayashizaki, Y., Mueller, F., Forrest, A. R. R., Carninci, P., Rehli, M. & Sandelin, Albin Gustav, 2014, In: Nature. 507, 7493, p. 455-461 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways

      Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies

      Boyd, M., Thodberg, M., Vitezic, M., Lange, J. B., Vitting-Seerup, K., Chen, Y., Coskun, M., Li, Y., Lo, B. Z. S., Klausen, P., Schweiger, P., Pedersen, A. G., Rapin, N. P. J-P., Skovgaard, K., Dahlgaard, K., Andersson, R., Terkelsen, T. B., Lilje, B., Troelsen, J. T., Petersen, A. M. & 7 others, Jensen, Kim Bak, Gögenur, Ismail, Thielsen, P., Seidelin, Jakob Benedict, Nielsen, Ole Haagen, Bjerrum, Jakob Tveiten & Sandelin, Albin Gustav, 2018, In: Nature Communications. 9, 19 p., 1661.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Comprehensive profiling of the fission yeast transcription start site activity during stress and media response

      Thodberg, Malte, Thieffry, A., Lange, Jette Bornholdt, Boyd, M., Holmberg, Christian, Azad, A., Workman, C. T., Chen, Y., Ekwall, K., Nielsen, Olaf & Sandelin, Albin Gustav, 28 Feb 2019, In: Nucleic Acids Research. 47, 4, p. 1671-1691 21 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Detecting host responses to microbial stimulation using primary epithelial organoids

      Lange, Jette Bornholdt, Müller, C. V., Nielsen, M. J., Strickertsson, J., Rago, D., Chen, Y., Maciag, Grzegorz Jerzy, Skov, Jonathan, Wellejus, A., Schweiger, P. J., Hansen, Stine Lind, Broholm, C., Gögenur, Ismail, Maimets, Martti, Sloth, S., Hendel, J., Baker, A., Sandelin, Albin Gustav & Jensen, Kim Bak, 2023, In: Gut Microbes. 15, 2, 16 p., 2281012.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Detection of Active Matriptase using a Biotinylated Chloromethyl Ketone Peptide

      Godiksen, S., Soendergaard, C., Friis, S., Jensen, J. K., Lange, Jette Bornholdt, Sales, K. U., Huang, M., Bugge, T. H. & Vogel, Lotte, 2013, In: P L o S One. 8, 10, 10 p., e77146.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network

      Grapotte, M., Saraswat, M., Bessière, C., Menichelli, C., Ramilowski, J. A., Severin, J., Hayashizaki, Y., Itoh, M., Tagami, M., Murata, M., Kojima-Ishiyama, M., Noma, S., Noguchi, S., Kasukawa, T., Hasegawa, A., Suzuki, H., Nishiyori-Sueki, H., Frith, M. C., Abugessaisa, I., Aitken, S. & 31 others, Aken, B. L., Alam, I., Alam, T., Alasiri, R., Alhendi, A. M. N., Alinejad-Rokny, H., Alvarez, M. J., Andersson, Robin, Arakawa, T., Araki, M., Arbel, T., Lange, Jette Bornholdt, Boyd, M., Chen, Y., Coskun, M., Dalby, M., Ienasescu, H., Jørgensen, M., Kaczkowski, B., Kere, J., Li, K., Lilje, B., Nepal, C., Nguyen, Q. H., Nielsen, L. K., Rennie, Sarah, Sandelin, Albin Gustav, Valen, E., Vitezic, M., Vitting-Seerup, K. & FANTOM Consortium, F. C., 2021, In: Nature Communications. 12, 18 p., 3297.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Effects of wood dust:Inflammation, Genotoxicity and Cancer.

      Lange, Jette Bornholdt, 2008, Museum Tusculanum.

      Research output: Book/Report › Ph.D. thesis › Research

    10. Published

      Effekter af træstøv; inflammation, gentoksicitet og cancer

      Lange, Jette Bornholdt, 2008, In: Miljø og Sundhed. 14, 3, p. 29-31 3 p.

      Research output: Contribution to journal › Journal article › Communication

    11. Published

      Expression of prostasin and its inhibitors during colorectal cancer carcinogenesis

      Selzer-Plon, J., Lange, Jette Bornholdt, Friis, S., Bisgaard, Hanne Cathrine, Lothe, I., Tveit, K., Kure, E., Vogel, U. & Vogel, Lotte, 2009, In: BMC Cancer. 9, 1, p. 201 1 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Expression profile of the N-myc Downstream Regulated Gene 2 (NDRG2) in human cancers with focus on breast cancer

      Lorentzen, A. B., Lewinsky, R., Lange, Jette Bornholdt, Vogel, Lotte & Mitchelmore, C., 1 Jan 2011, In: BMC Cancer. 11, p. 14

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Hepatocyte growth factor activator inhibitor-2 prevents shedding of matriptase

      Larsen, B. R., Steffensen, S. D. R., Nielsen, N. V. L., Friis, S., Godiksen, S., Lange, Jette Bornholdt, Soendergaard, C., Nonboe, Annika Weile, Andersen, M. N., Poulsen, Steen Seier, Szabo, R., Bugge, T. H., Lin, C., Skovbjerg, H., Jensen, J. K. & Vogel, Lotte, 1 Apr 2013, In: Experimental Cell Research. 319, 6, p. 918-929 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Identification of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2

      Boyd, M., Coskun, M., Lilje, B., Andersson, Robin, Hoof, I., Lange, Jette Bornholdt, Dahlgaard, K., Olsen, Jørgen, Vitezic, M., Bjerrum, Jakob Tveiten , Seidelin, Jakob Benedict, Nielsen, Ole Haagen, Troelsen, J. & Sandelin, Albin Gustav, 2014, In: D N A Research. 21, 6, p. 569-583 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Identification of gene transcription start sites and enhancers responding to pulmonary carbon nanotube exposure in Vivo

      Lange, Jette Bornholdt, Saber, A. T., Lilje, B., Boyd, M., Jørgensen, M., Chen, Y., Vitezic, M., Jacobsen, N. R., Poulsen, S. S., Berthing, T., Bressendorff, Simon, Vitting-Seerup, K., Andersson, Robin, Hougaard, K. S., Yauk, C. L., Halappanavar, S., Wallin, E. H. R., Vogel, U. & Sandelin, Albin Gustav, 2017, In: A C S Nano. 11, 4, p. 3597-3613 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Inflammatory response and genotoxicity of seven wood dusts in the human epithelial cell line A549

      Lange, Jette Bornholdt, Saber, A. T., Sharma, A. K., Savolainen, K., Vogel, U. & Wallin, H., 2007, In: Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 632, 1-2, p. 78-88 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. K-ras mutations in sinonasal cancers in relation to wood dust exposure

      Lange, Jette Bornholdt, Hansen, J., Steiniche, T., Dictor, M., Antonsen, A., Wolff, H., Schlünssen, V., Holmila, R., Luce, D., Vogel, U., Husgafvel-Pursiainen, K. & Wallin, H., 2008, In: BMC Cancer. 8, p. 53

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Lack of acute phase response in the livers of mice exposed to diesel exhaust particles or carbon black by inhalation

      Saber, A. T., Halappanavar, S., Folkmann, J. K., Lange, Jette Bornholdt, Boisen, A. M. Z., Møller, Peter, Williams, A., Yauk, C., Vogel, U., Loft, Steffen & Wallin, H., 2009, In: Particle and Fibre Toxicology. 6, p. 12

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Molecular constituents of the extracellular matrix in rat liver mounting a hepatic progenitor cell response for tissue repair

      Vestentoft, P. S., Jelnes, P., Andersen, Jesper Bøje, Tran, T. A. T., Jørgensen, T., Rasmussen, M., Lange, Jette Bornholdt, Grøvdal, L. M., Jensen, C. H., Vogel, Lotte, Thorgeirsson, S. S. & Bisgaard, Hanne Cathrine, 2013, In: Fibrogenesis & Tissue Repair. 6, 1, 15 p., 21.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Mutations in TP53 tumor suppressor gene in wood dust-related sinonasal cancer

      Holmila, R., Lange, Jette Bornholdt, Heikkilä, P., Suitiala, T., Févotte, J., Cyr, D., Hansen, J., Snellman, S., Dictor, M., Steiniche, T., Schlünssen, V., Schneider, T., Pukkala, E., Savolainen, K., Wolff, H., Wallin, H., Luce, D. & Husgafvel-Pursiainen, K., 2010, In: International Journal of Cancer. 127, 3, p. 578-88 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Nuclear stability and transcriptional directionality separate functionally distinct RNA species

      Andersson, Robin, Refsing Andersen, P., Valen, E., Core, L. J., Lange, Jette Bornholdt, Boyd, M., Jensen, T. H. & Sandelin, Albin Gustav, 2014, In: Nature Communications. 5, 10 p., 5336.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase

      Ienasescu, H., Li, K., Andersson, Robin, Vitezic, M., Rennie, Sarah, Chen, Y., Vitting-Seerup, K., Lagoni, E., Boyd, M., Lange, Jette Bornholdt, de Hoon, M. J. L., Kawaji, H., Lassmann, T., FANTOM Consortium, F. C., Hayashizaki, Y., Forrest, A. R. R., Carninci, P. & Sandelin, Albin Gustav, 2016, In: Database: The Journal of Biological Databases and Curation. 2016, 0, 10 p., baw144.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave

      Thieffry, A., López Márquez, Diego, Lange, Jette Bornholdt, Gholami Malekroudi, M., Bressendorff, Simon, Barghetti, A., Sandelin, Albin Gustav & Brodersen, Peter, 2022, In: The Plant Cell. 34, 7, 23 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Personalized B cell response to the Lactobacillus rhamnosus GG probiotic in healthy human subjects: a randomized trial

      Lange, Jette Bornholdt, Chen, Y., Rago, Alfredo, Sloth, S., Hendel, J., Melsæther, C., Müller, C. V., Juul Nielsen, M., Strickertsson, J., Engelholm, Lars Henning, Vitting-Seerup, K., Jensen, Kim Bak, Baker, A. & Sandelin, Albin Gustav, 9 Nov 2020, In: Gut Microbes. 12, 1, p. 1-14 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality

      Ntini, E., Järvelin, A. I., Lange, Jette Bornholdt, Chen, Y., Boyd, M., Jørgensen, M., Andersson, Robin, Hoof, I., Schein, A., Andersen, P. R., Andersen, P. K., Preker, P., Valen, E., Zhao, X., Pelechano, V., Steinmetz, L. M., Sandelin, Albin Gustav & Jensen, T. H., 2013, In: Nature Structural and Molecular Biology. 20, p. 923-928 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 33667728