Jacob Heilmann-Clausen

Jacob Heilmann-Clausen

Associate Professor

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    ORCID: 0000-0003-4713-6004

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    1. Published

      (2416-2419) Proposals to conserve the names Tricholoma populinum against T. suffocatum with a conserved type, T. sciodes against Agaricus hordus, A. cingulatus (T. cingulatum) against A. ramentaceus, and A. psammopus (T. psammopus) against A. concolor (Basidiomycota)

      Heilmann-Clausen, Jacob, Christensen, M., Moreau, P. & Noordeloos, M., 2016, In: Taxon. 65, 1, p. 186-187 2 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    2. Published

      Pluteus dianae and P. punctatus resurrected, with first records from eastern and northern Europe

      Sevcikova, H., Malysheva, E. F., Justo, A., Heilmann-Clausen, Jacob & Tomsovsky, M., 2020, In: Mycotaxon. 135, 2, p. 245-274 30 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Pluteus insidiosus Complex, Four New Species Described and Pluteus reisneri Resurrected

      Sevcikova, H., Ferisin, G., Malysheva, E., Justo, A., Heilmann-Clausen, Jacob, Horak, E., Kalinina, L., Kaygusuz, O., Knudsen, H., Menolli, N., Moreau, P., Munoz Gonzalez, G., Saar, I., Türkekul, I. & Dovana, F., 2022, In: Journal of Fungi. 8, 6, 26 p., 623.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      A fungal perspective on conservation biology

      Heilmann-Clausen, Jacob, Barron, E. S., Boddy, L., Dahlberg, A., Griffith, G. W., Norden, J., Ovaskainen, O., Perini, C., Senn-Irlet, B. & Halme, P., 2015, In: Conservation Biology. 29, 1, p. 61-68 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      A gradient analysis of communities of macrofungi and slime moulds on decaying beech logs

      Heilmann-Clausen, Jacob, May 2001, In: Fungal Biology. 105, p. 575-596

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Anbefalinger vedrørende omstilling og forvaltning af skov til biodiversitetsformål: Udarbejdet for Naturstyrelsen

      Møller, P. F., Heilmann-Clausen, Jacob, Johannsen, VK, Buttenschøn, Rita M., Schmidt, Inger Kappel, Rahbek, Carsten, Bruun, Hans Henrik & Ejrnæs, R., 2018, København: GEUS. 86 p. (Danmarks og Grønlands Geologiske Undersøgelse Rapport; No. 28, Vol. 2018).

      Research output: Book/Report › Report › Commissioned › peer-review

    7. Published

      Are ungulates in forests concerns or key species for conservation and biodiversity? Reply to Boulanger et al. (DOI: 10.1111/gcb.13899)

      Fløjgaard, C., Bruun, Hans Henrik, Hansen, M. D. D., Heilmann-Clausen, Jacob, Svenning, J. & Ejrnæs, R., 2018, In: Global Change Biology. 24, 3, p. 869-871 3 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    8. Published

      Arthropod communities in fungal fruitbodies are weakly structured by climate and biogeography across European beech forests

      Friess, N., Müller, J. C., Aramendi, P., Bässler, C., Brändle, M., Bouget, C., Brin, A., Bussler, H., Georgiev, K. B., Gil, R., Gossner, M. M., Heilmann-Clausen, Jacob, Isacsson, G., Kristin, A., Lachat, T., Larrieu, L., Magnanou, E., Maringer, A., Mergner, U., Mikolas, M., Opgenoorth, L., Schmidl, J., Svoboda, M., Thorn, S., Vandekerkhove, K., Vrezec, A., Wagner, T., Winter, M., Zapponi, L., Brandl, R. & Seibold, S., 2019, In: Diversity and Distributions. 25, 5, p. 783-796

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Automatic Fungi Recognition: Deep Learning Meets Mycology

      Picek, L., Šulc, M., Matas, J., Heilmann-Clausen, Jacob, Jeppesen, T. S. & Lind, E., 2022, In: Sensors. 22, 2, 22 p., 633.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Bevarelse af biodiversiteten i de danske skove: en analyse af den nødvendige indsats, og hvad den betyder for skovens andre samfundsgoder

      Højgård Petersen, A., Lundhede, Thomas, Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 2016, Center for Makroøkologi, Evolution og Klima, Københavns Universitet. 127 p.

      Research output: Book/Report › Report › Research

    11. Published

      Bevarelse af biodiversiteten i de danske skove

      Petersen, A. H., Lundhede, Thomas, Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 2016, In: Dansk Ornitologisk Forenings Tidsskrift. 109, p. 186-188 3 p.

      Research output: Contribution to journal › Journal article › Research

    12. Published

      Big data integration: pan-European fungal species observations' assembly for addressing contemporary questions in ecology and global change biology

      Andrew, C., Heegaard, E., Kirk, P. M., Bässler, C., Heilmann-Clausen, Jacob, Krisai-Greilhuber, I., Kuyper, T. W., Senn-Irlet, B., Büntgen, U., Diez, J., Egli, S., Gange, A. C., Halvorsen, R., Høiland, K., Nordén, J., Rustøen, F., Boddy, L. & Kauserud, H., Mar 2017, In: Fungal Biology Reviews. 31, 2, p. 88-98 11 p.

      Research output: Contribution to journal › Review › Research › peer-review

    13. Published

      Biodiversiteten er i tilbagegang – også på statens arealer

      Ejrnæs, R., Svenning, J., Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Rahbek, Carsten & Hansen, M. D. D., 22 Jan 2019, In: Altinget.dk. 1 p.

      Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

    14. Published

      Biodiversity response to forest structure and management: Comparing species richness, conservation relevant species and functional diversity as metrics in forest conservation: comparing species richness, conservation relevant species and functional diversity as metrics in forest conservation

      Lelli, C., Bruun, Hans Henrik, Chiarucci, A., Donati, D., Frascaroli, F., Fritz, Ö., Goldberg, Irina, Nascimbene, J., Tøttrup, Anders P., Rahbek, Carsten & Heilmann-Clausen, Jacob, 2019, In: Forest Ecology and Management. 432, p. 707-717 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Biologer om "Klimaskoven": Grov forenkling af virkeligheden og misvisende

      Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 9 Mar 2020, In: JA Aktuelt.

      Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

    16. Published

      Biologiske anbefalinger om udpegning af skov til biodiversitetsformål på statens arealer: Forskningsbaseret rådgivning fra Københavns og Aarhus Universiteter i forbindelse med regeringens Naturpakke

      Petersen, A. H., Bladt, J., Bruun, Hans Henrik, Ejrnæs, R., Heilmann-Clausen, Jacob & Rahbek, Carsten, 2017, København: Københavns Universitet. 40 p.

      Research output: Book/Report › Report › Commissioned

    17. Published

      Citizen science data reveal ecological, historical and evolutionary factors shaping interactions between woody hosts and wood-inhabiting fungi

      Heilmann-Clausen, Jacob, Maruyama, P. K., Bruun, Hans Henrik, Dimitrov, D., Læssøe, Thomas, Frøslev, Tobias Guldberg & Dalsgaard, Bo, 2016, In: New Phytologist. 212, 4, p. 1072-1082 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Communities of wood-inhabiting bryophytes and fungi on dead beech logs in Europe - reflecting substrate quality or shaped by climate and forest conditions?

      Heilmann-Clausen, Jacob, Aude, E., van Dort, K., Christensen, M., Piltaver, A., Veerkamp, M., Walleyn, R., Siller, I., Standovar, T. & Ódor, P., 2014, In: Journal of Biogeography. 41, 12, p. 2269-2282 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Congruent patterns of functional diversity in saproxylic beetles and fungi across European beech forests

      Hagge, J., Abrego, N., Bässler, C., Bouget, C., Brin, A., Brustel, H., Christensen, M., Gossner, M. M., Heilmann-Clausen, Jacob, Horák, J., Gruppe, A., Isacsson, G., Köhler, F., Lachat, T., Larrieu, L., Schlaghamersky, J., Thorn, S., Zapponi, L. & Müller, J., 2019, In: Journal of Biogeography. 46, 5, p. 1054-1065

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Continental-scale macrofungal assemblage patterns correlate with climate, soil carbon and nitrogen deposition

      Andrew, C., Halvorsen, R., Heegaard, E., Kuyper, T. W., Heilmann-Clausen, Jacob, Krisai-greilhuber, I., Bässler, C., Egli, S., Gange, A. C., Høiland, K., Kirk, P. M., Senn-irlet, B., Boddy, L., Büntgen, U. & Kauserud, H., 1 Aug 2018, In: Journal of Biogeography. 45, 8, p. 1942-1953

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Cryptogam communities on decaying deciduous wood - does tree species diversity matter?

      Heilmann-Clausen, Jacob, Aude, E. & Christensen, M., Aug 2005, In: Biodiversity and Conservation. 14, 9, p. 2061-2078

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Danish Fungi 2020 - Not Just Another Image Recognition Dataset

      Picek, L., Sulc, M., Matas, J., Jeppesen, T. S., Heilmann-Clausen, Jacob, Læssøe, Thomas & Frøslev, Tobias Guldberg, 2022, Proceedings - 2022 IEEE Winter Conference on Applications of Computer Vision, WACV 2022. O'Conner, L. (ed.). IEEE, p. 3281-3291 11 p.

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    23. Published

      Danmarks Svampeatlas 2009-2013

      Heilmann-Clausen, Jacob, Læssøe, Thomas, Frøslev, Tobias Guldberg & Petersen, J. H., 2019, Svampetryk. 350 p.

      Research output: Book/Report › Book › Communication

    24. Published

      Danmarks Svampeatlas – 2018-sæsonen

      Heilmann-Clausen, Jacob, Frøslev, Tobias Guldberg, Læssøe, Thomas, Jeppesen, T. S., Petersen, J. H. & Søchting, Ulrik, 2019, In: Svampe. 79, p. 52-55

      Research output: Contribution to journal › Journal article › Communication

    25. Published

      Dataset on species incidence, species richness and forest characteristics in a Danish protected area

      Mazziotta, A., Heilmann-Clausen, Jacob, Bruun, Hans Henrik, Fritz, Ö., Aude, E. & Tøttrup, Anders P., 2016, In: Data in Brief. 9, p. 895-897 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      De danske skoves biodiversitet i tid og rum

      Højgård Petersen, A., Bruun, Hans Henrik, Heilmann-Clausen, Jacob & Rahbek, Carsten, 2016, In: Kaskelot. 210, p. 10-14 5 p.

      Research output: Contribution to journal › Journal article › Communication

    27. Published

      Detecting flying insects using car nets and DNA metabarcoding

      Svenningsen, Cecilie, Frøslev, Tobias Guldberg, Bladt, J., Pedersen, Lene Bruhn, Larsen, J. C., Ejrnaes, R., Flojgaard, C., Hansen, Anders Johannes, Heilmann-Clausen, Jacob, Dunn, R. R. & Tøttrup, Anders P., 2021, In: Biology Letters. 17, 3, 6 p., 20200833.

      Research output: Contribution to journal › Letter › Research › peer-review

    28. Developing a comprehensive strategy for fungal conservation in Europe: current status and future needs

      Dahlberg, A., Genney, D. R. & Heilmann-Clausen, Jacob, May 2010, In: Fungal Ecology. 3, 2, p. 50-64 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Dieback of European ash (Fraxinus excelsior) - Sheer misery or an opportunity for biodiversity? - Reply to Pautasso

      Heilmann-Clausen, Jacob, Bruun, Hans Henrik & Ejrnæs, R., 1 Nov 2013, In: Biological Conservation. 167, p. 450-451 2 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    30. Published

      Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities

      Graco-Roza, C., Aarnio, S., Abrego, N., Acosta, A. T. R., Alahuhta, J., Altman, J., Angiolini, C., Aroviita, J., Attorre, F., Båstrup-Spohr, Lars, Barrera-Alba, J. J., Belmaker, J., Biurrun, I., Bonari, G., Bruelheide, H., Burrascano, S., Carboni, M., Cardoso, P., Carvalho, J. C., Castaldelli, G., Christensen, M., Correa, G., Dembicz, I., Dengler, J., Dolezal, J., Domingos, P., Erös, T., Ferreira, C. E. L., Filibeck, G., Floeter, S. R., Friedlander, A. M., Gammal, J., Gavioli, A., Gossner, M. M., Granot, I., Guarino, R., Gustafsson, C., Hayden, B., He, S., Heilmann-Clausen, Jacob, Heino, J., Hunter, J. T., Huszar, V. L. M., Janišová, M., Jyrkänkallio-Mikkola, J., Kahilainen, K. K., Kemppinen, J., Kozub, Ł., Kruk, C., Kulbiki, M., Kuzemko, A., Christiaan le Roux, P., Lehikoinen, A., Teixeira de Lima, D., Lopez-Urrutia, A., Lukács, B. A., Luoto, M., Mammola, S., Marinho, M. M., Menezes, L. S., Milardi, M., Miranda, M., Moser, G. A. O., Mueller, J., Niittynen, P., Norkko, A., Nowak, A., Ometto, J. P., Ovaskainen, O., Overbeck, G. E., Pacheco, F. S., Pajunen, V., Palpurina, S., Picazo, F., Campos, J. A., Rodil, I. F., Sabatini, F. M., Salingré, S., De Sanctis, M., Segura, A. M., da Silva, L. H. S., Stevanovic, Z. D., Swacha, G., Teittinen, A., Tolonen, K. T., Tsiripidis, I., Virta, L., Wang, B., Wang, J., Weisser, W., Xu, Y. & Soininen, J., 2022, In: Global Ecology and Biogeography. 31, 7, p. 1399-1421 23 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Do plant-based biogeographical regions shape aphyllophoroid fungal communities in Europe?

      Ordynets, A., Heilmann-Clausen, Jacob, Savchenko, A., Bässler, C., Volobuev, S., Akulov, O., Karadelev, M., Kotiranta, H., Saitta, A., Langer, E. & Abrego, N., 2018, In: Journal of Biogeography. 45, 5, p. 1182-1195 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      Does size matter? On the importance of various dead wood fractions for fungal diversity in Danish beech forests

      Heilmann-Clausen, Jacob & Christensen, M., 1 Nov 2004, In: Forest Ecology and Management. 201, 1, p. 105-119

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      Dynamik og forstyrrelser i skoven: svampe

      Møller, P. F., Thomsen, Iben Margrete & Heilmann-Clausen, Jacob, 2010, Naturen i Danmark: skovene. Sand-Jensen, K. & Møller, P. F. (eds.). Gyldendal, p. 290-295 6 p.

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

    34. Published

      Dødt ved og gamle træer: hvor meget og hvor mange i de danske skove?

      Bruun, Hans Henrik, Ejrnæs, R., Heilmann-Clausen, Jacob, Aude, E. & Skovlund Poulsen, R., 2009, In: Jord & Viden. 154, 17, p. 10-13 4 p.

      Research output: Contribution to journal › Journal article › Research

    35. Published

      Ectomycorrhizal fungi have larger fruit bodies than saprotrophic fungi

      Bässler, C., Heilmann-Clausen, Jacob, Karasch, P., Brandl, R. & Halbwachs, H., 2015, In: Fungal Ecology. 17, p. 205-212 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    36. Published

      Efter asken

      Ejrnæs, R., Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 16 Nov 2012, In: Weekendavisen. p. 12 1 p.

      Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

    37. Published

      Er god natur demokratisk?

      Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Tøttrup, Anders P. & Rasmussen, B. I., 2012, In: Aktuel Naturvidenskab. 6-2012, p. 2 1 p.

      Research output: Contribution to journal › Comment/debate › Communication

    38. Published

      European mushroom assemblages are darker in cold climates

      Krah, F., Buntgen, U., Schaefer, H., Mueller, J., Andrew, C., Boddy, L., Diez, J., Egli, S., Freckleton, R., Gange, A. C., Halvorsen, R., Heegaard, E., Heideroth, A., Heibl, C., Heilmann-Clausen, Jacob, Hoiland, K., Kar, R., Kauserud, H., Kirk, P. M., Kuyper, T. W., Krisai-Greilhuber, I., Norden, J., Papastefanou, P., Senn-Irlet, B. & Baessler, C., 2019, In: Nature Communications. 10, 11 p., 2890.

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      European mushroom assemblages are phylogenetically structured by temperature

      Bässler, C., Heilmann-Clausen, Jacob, Andrew, C., Boddy, L., Büntgen, U., Diez, J., Heegaard, E., Egli, S., Gange, A. C., Halvorsen, R., Kauserud, H., Kirk, P. M., Krisai-Greilhuber, I., Kuyper, T. W., Nordén, J., Senn-Irlet, B. & Krah, F., 2022, In: Ecography. 2022, 11, 12 p., e06206.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. Published

      Evaluering af indsatsen for biodiversiteten i de danske skove 1992 - 2012

      Johannsen, VK, Dippel, T., Friis Møller, P., Heilmann-Clausen, Jacob, Ejrnæs, R., Larsen, Jørgen Bo, Raulund-Rasmussen, Karsten, Kepfer Rojas, Sebastian, Jørgensen, Bruno Bilde, Riis-Nielsen, Torben, Bruun, Hans Henrik, Thomsen, P. F., Eskildsen, A., Fredshavn, J. R., Kjær, Erik Dahl, Nord-Larsen, Thomas, Caspersen, Ole H. & Hansen, G. K., 2013, Institut for Geovidenskab og Naturforvaltning, Københavns Universitet. 89 p.

      Research output: Book/Report › Report › Research

    41. Published

      Explaining European fungal fruiting phenology with climate variability

      Andrew, C., Heegaard, E., Hoiland, K., Senn-Irlet, B., Kuyper, T. W., Krisai-Greilhuber, I., Kirk, P. M., Heilmann-Clausen, Jacob, Gange, A. C., Egli, S., Bässler, C., Büntgen, U., Boddy, L. & Kauserud, H., 2018, In: Ecology. 99, 6, p. 1306-1315 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Fem dagsommerfugle forsvundet

      Ejrnæs, R., Heilmann-Clausen, Jacob & Bruun, Hans Henrik, 19 Apr 2013, In: Weekendavisen. 1 p.

      Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

    43. Published

      First Evidence That Nematode Communities in Deadwood Are Related to Tree Species Identity and to Co-Occurring Fungi and Prokaryotes

      Moll, J., Roy, F., Bässler, C., Heilmann-Clausen, Jacob, Hofrichter, M., Kellner, H., Krabel, D., Schmidt, J. H., Buscot, F. & Hoppe, B., 2021, In: Microorganisms. 9, 7, 15 p., 1454.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Flying insect biomass is negatively associated with urban cover in surrounding landscapes

      Svenningsen, Cecilie, Bowler, D. E., Hecker, S., Bladt, J., Grescho, V., van Dam, N. M., Dauber, J., Eichenberg, D., Ejrnæs, R., Fløjgaard, C., Frenzel, M., Frøslev, Tobias Guldberg, Hansen, Anders Johannes, Heilmann-Clausen, Jacob, Huang, Y., Larsen, J. C., Menger, J., Nayan, N. L. B. M., Pedersen, Lene Bruhn, Richter, A., Dunn, Rob, Tøttrup, Anders P. & Bonn, A., 2022, In: Diversity and Distributions. 28, 6, p. 1242-1254

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Forest biodiversity gradients and the human impact in Annapurna Conservation Area, Nepal

      Christensen, M. & Heilmann-Clausen, Jacob, Jul 2009, In: Biodiversity and Conservation. 18, 8, p. 2205-2221

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      Forests: see the trees and the wood

      Bruun, Hans Henrik, Heilmann-Clausen, Jacob & Ejrnæs, R., 2015, In: Nature. 521, 32, p. 32 1 p.

      Research output: Contribution to journal › Comment/debate › Research

    47. Published

      Forskere i biodiversitet: Vildere natur er ikke en trussel mod naturen

      Bruun, Hans Henrik, Svenning, J., Rahbek, Carsten, Heilmann-Clausen, Jacob, Hansen, M. D. D. & Ejrnæs, R., 17 Nov 2020, In: Altinget.dk.

      Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

    48. Published

      Forskere: Her er fakta om biodiversitet i skovene

      Bruun, Hans Henrik, Ejrnæs, R., Hansen, M. D. D., Heilmann-Clausen, Jacob, Rahbek, Carsten & Svenning, J., 12 May 2015, In: Altinget Miljø.

      Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

    49. Published

      Fremgang for dødt ved i danske skove – faktum eller ønsketækning?

      Heilmann-Clausen, Jacob, Bruun, Hans Henrik, Ejrnæs, R., Højgård Petersen, A. & Rahbek, Carsten, 2015, In: Skoven. 47, 3, p. 126-130 5 p.

      Research output: Contribution to journal › Journal article › Communication

    50. Published

      Fungal diversity on decaying beech logs - implications for sustainable forestry

      Heilmann-Clausen, Jacob & Christensen, M., May 2003, In: Biodiversity and Conservation. 12, 5, p. 953-973

      Research output: Contribution to journal › Journal article › Research › peer-review

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