Mads Nielsen

Mads Nielsen

Professor

ORCID: 0000-0003-1535-068X

Publication year:
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101 - 200 out of 368Page size: 100
  1. 2014
  2. Published

    Breast tissue segmentation from x-ray radiographs

    Chen, C., Nielsen, Mads, Karssemeijer, N. & Brandt, S. S., 2014, In: Physics in Medicine and Biology. 59, 10, p. 2445-2456 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Computer analysis method for analyzing images involves applying algorithm to aligned images to extract quantitative estimate of difference in volume of object shown in second image by calculating change in volume of object

    Pai, A. S. U., Sørensen, L., Dam, E., Lillholm, Martin & Nielsen, Mads, 2014, IPC No. A61B-005/00, Patent No. US2014357978-A1, 4 Dec 2014, Priority date 4 Jun 2013, Priority No. US909666

    Research output: Patent

  4. Published

    Dementia diagnosis using MRI cortical thickness, shape, texture, and volumetry

    Sørensen, L., Pai, A. S. U., Anker, C., Balas, I., Lillholm, Martin, Igel, Christian & Nielsen, Mads, 2014, MICCAI 2014 Workshop Proceedings: Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data. Bron, E. E., Smits, M., van Swieten, J. C., Niessen, W. J. & Klein, S. (eds.). Erasmus Universiteit Rotterdam, p. 111-118 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  5. Published

    Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    Petersen, Jens, Wille, M. M. W., Raket, L. L., Feragen, A., Pedersen, J. H., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2014, In: European Radiology. 24, 9, p. 2319-2325 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Geometry and statistics: manifolds and stratified spaces

    Feragen, A., Nielsen, Mads, Jensen, E. B. V., Plessis, A. D. & Lauze, Francois Bernard, 2014, In: Journal of Mathematical Imaging and Vision. 50, 1, p. 1-4 4 p.

    Research output: Contribution to journal › Editorial › Research

  7. Published

    Graph-based fibre tractography computing shortest paths between regions of interest

    Kasenburg, N., Liptrot, M. G., Borgwardt, K., Ørting, S. N., Nielsen, Mads & Feragen, A., 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  8. Published

    Mammographic texture resemblance generalizes as an independent risk factor for breast cancer

    Nielsen, Mads, Vachon, C. M., Scott, C. G., Chernoff, K., Karemore, G., Karssemeijer, N., Lillholm, Martin & Karsdal, M., 2014, In: Breast Cancer Research (Online Edition). 16, 2, 8 p., R37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, Marleen, 2014, In: Medical Image Analysis. 18, 3, p. 531-541 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Optimization over geodesics for exact principal geodesic analysis

    Sommer, Stefan Horst, Lauze, Francois Bernard & Nielsen, Mads, 2014, In: Advances in Computational Mathematics. 40, 2, p. 283-313 31 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, A. S. U., Sørensen, L. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P538-P539 2 p., P2-186.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  12. Published

    Persistent hippocampal predominant atrophy in pre dementia as a marker for slower functional decline

    Pillai, J., Pai, A. S. U., Sørensen, L. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P34-P35 2 p., IC-P-061.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  13. Published

    Simultaneous registration and bilateral differential bias correction in brain MRI

    Zou, B., Pai, A. S. U., Sørensen, L. & Nielsen, Mads, 2014, Intelligent Imaging: Linking MR Acquisition and Processing.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  14. Published

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2014, Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. Ourselin, S. & Modat, M. (eds.). Springer, p. 223-230 8 p. (Lecture notes in computer science, Vol. 8545).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  15. Published

    Validation of hippocampal texture for early Alzheimer’s disease detection: generalization to independent cohorts and extrapolation to very early signs of dementia

    Sørensen, L., Igel, Christian, Hansen, N. L., Lauritzen, Martin, Osler, Merete, Rostrup, Egill & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P133 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  16. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P75-P76 2 p., IC-P-131.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  17. Published

    White matter hypointensity growth rate correlates with rate of brain atrophy

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Sporring, Jon, Rostrup, E. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P414 1 p., P1-285.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  18. 2013
  19. Published

    A unifying framework for automatic and semi-automatic segmentation of vertebrae from radiographs using sample-driven active shape models

    Mysling, P., Petersen, P. K., Nielsen, Mads & Lillholm, Martin, 2013, In: Machine Vision & Applications. 24, 7, p. 1421–1434 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Cube propagation for focal brain atrophy estimation

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Mysling, P., Jørgensen, D. R., Dam, E. B., Lillholm, Martin, Oh, J., Chen, G., Suhy, J., Sporring, Jon & Nielsen, Mads, 2013, 2013 IEEE 10th International Symposium on Biomedical Imaging. IEEE, p. 402-405 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Deep feature learning for knee cartilage segmentation using a triplanar convolutional neural network

    Prasoon, A., Petersen, P. K., Igel, Christian, Lauze, Francois Bernard, Dam, Erik Bjørnager & Nielsen, Mads, 2013, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013: 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II. Mori, K., Sakuma, I., Sato, Y., Barillot, C. & Navab, N. (eds.). Springer, p. 246-253 8 p. (Lecture notes in computer science, Vol. 8150).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. Published

    Evaluation of WBAA with registration-based cube propagation for brain atrophy quantification

    Lillholm, Martin, Pai, A. S. U., Sørensen, L., Nielsen, Mads, Sporring, Jon, Darkner, Sune & Dam, E., 2013. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  23. Published

    Femoral cartilage segmentation in knee MRI scans using two stage voxel classification

    Prasoon, A., Igel, Christian, Loog, M., Lauze, Francois Bernard, Dam, E. & Nielsen, Mads, 2013, 35th Annual International Conference of the IEEE; Engineering in Medicine and Biology Society (EMBC), 2013. IEEE, p. 5469-5472 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  24. Published

    Higher-order momentum distributions and locally affine LDDMM registration

    Sommer, Stefan Horst, Nielsen, Mads, Darkner, Sune & Pennec, X., 2013, In: S I A M Journal on Imaging Sciences. 6, 1, p. 341-367 27 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Hippocampal texture predicts conversion from MCI to Alzheimer's disease

    Sørensen, L., Pai, A. S. U., Igel, Christian & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P581 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  26. Published

    Hippocampal texture predicts conversion from MCI to Alzheimer's disease

    Sørensen, L., Igel, Christian & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P52 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  27. Published

    Hippocampal texture predicts one-year hippocampal atrophy in mild cognitively impaired subjects

    Sørensen, L., Pai, A. S. U., Mysling, P., Darkner, Sune, Chen, G., Oh, J., Suhy, J., Igel, Christian & Nielsen, Mads, 2013. 1 p.

    Research output: Contribution to conference › Poster › Research › peer-review

  28. Published

    Hippocampus atrophy in early Alzheimer's disease quantified using non-rigid registration with cube propagation

    Pai, A. S. U., Sørensen, L. E. B. L., Mysling, P., Erleben, L. L., Sporring, Jon, Dam, E., Lillholm, M., Jørgensen, D. R., Chen, G., Oh, J., Suhy, J. & Nielsen, Mads, 2013.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  29. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P36–P37 2 p., IC-P-059.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  30. Published

    Localized cerebral atrophy acceleration during Alzheimer’s disease

    Pai, A. S. U., Sørensen, L., Darkner, Sune, Lillholm, Martin, Dam, E. B., Sporring, Jon & Nielsen, Mads, 2013, In: Alzheimer's & Dementia. 9, 4, Supplement, p. P151 1 p., O1-10-06.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  31. Published

    Mathematical methods for medical imaging

    Pennec, X., Joshi, S. & Nielsen, Mads, 2013, In: International Journal of Computer Vision. 105, 2, p. 109-110 2 p.

    Research output: Contribution to journal › Editorial › Research

  32. Published

    Morphometric connectivity analysis to distinguish normal, mild cognitive impaired, and Alzheimer subjects based on brain MRI

    Erleben, L. L., Sørensen, L., Mysling, P., Pai, A. S. U., Dam, E. B. & Nielsen, Mads, 2013, Medical Imaging 2013: image processing . Ourselin, S. & Haynor, D. R. (eds.). SPIE - International Society for Optical Engineering, 6 p. 866926. (Progress in Biomedical Optics and Imaging; No. 36, Vol. 14).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  33. Published

    Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan

    Pennec, X. (ed.), Joshi, S. (ed.), Nielsen, Mads (ed.), Fletcher, T. P. (ed.), Durrleman, S. (ed.) & Sommer, Stefan Horst (ed.), 2013, INRIA. 134 p.

    Research output: Book/Report › Book › Research › peer-review

  34. Published

    Sparse multi-scale diffeomorphic registration: the kernel bundle framework

    Sommer, Stefan Horst, Lauze, Francois Bernard, Nielsen, Mads & Pennec, X., 2013, In: Journal of Mathematical Imaging and Vision. 46, 3, p. 292-308 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Toward a theory of statistical tree-shape analysis

    Feragen, A., Lo, P. C. P., de Bruijne, Marleen, Nielsen, Mads & Lauze, Francois Bernard, 2013, In: I E E E Transactions on Pattern Analysis and Machine Intelligence. 35, 8, p. 2008-2021 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. 2012
  37. Published

    A Bayesian framework for automated cardiovascular risk scoring on standard lumbar radiographs

    Petersen, P. K., Ganz, Melanie, Mysling, P., Nielsen, Mads, Erleben, L. L., Crimi, A. & Brandt, S. S., 2012, In: I E E E Transactions on Medical Imaging. 31, 3, p. 663-676 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    A splitting algorithm for directional regularization and sparsification

    Rakêt, L. L. & Nielsen, Mads, 2012, Proceedings of the 21st International Conference on Pattern Recognition (ICPR). IEEE, p. 3094-3098 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  39. Published

    Automatic quantification of congruity from knee MRI

    Tummala, S., Dam, E. & Nielsen, Mads, 2012, Computational Biomechanics for Medicine: deformation and flow. Nielsen, P. M. F., Wittek, A. & Miller, K. (eds.). Springer, p. 51-61 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  40. Published

    Automatic quantification of tibio-femoral contact area and congruity

    Tummala, S., Nielsen, Mads, Lillholm, Martin, Christiansen, C. & Dam, Erik Bjørnager, 2012, In: I E E E Transactions on Medical Imaging. 31, 7, p. 1404-1412 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Breast density scoring with multiscale denoising autoencoders

    Petersen, P. K., Chernoff, K., Nielsen, Mads & Ng, A. Y., 2012. 8 p.

    Research output: Contribution to conference › Paper › Research › peer-review

  42. Published

    Cascaded classifier for large-scale data applied to automatic segmentation of articular cartilage

    Prasoon, A., Igel, Christian, Loog, M., Lauze, Francois Bernard, Dam, E. & Nielsen, Mads, 2012, Medical Imaging 2012: Image Processing. Haynor, D. R. & Ourselin, S. (eds.). SPIE - International Society for Optical Engineering, Vol. 8314. 9 p. 83144V. (SPIE Proceedings, Vol. 8314).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  43. Published

    Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women

    Ganz, Melanie, de Bruijne, Marleen, Dam, E. B., Pettersen, P., Karsdal, M. A., Christiansen, C. & Nielsen, Mads, 2012, In: International Journal of Biomedical Imaging. 2012, 8 p., 459286.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Evaluation of a novel approach for automatic delineation of vertebral contours in radiographs

    Mysling, P., Petersen, P. K., Nielsen, Mads & Lillholm, Martin, 2012, In: Osteoporosis International. 23, Supplement 2, p. S250-S250 1 p., P439.

    Research output: Contribution to journal › Conference abstract in journal › Research

  45. Published

    Evaluation of bias in brain atrophy estimation

    Pai, A. S. U., Darkner, Sune, Sørensen, L., Erleben, L. L., Mysling, P., Sporring, Jon, Dam, E. & Nielsen, Mads, 2012, NIBAD '12: MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders. Wang, L., Yushkevich, P. & Ourselin, S. (eds.). MICCAI , p. 198-206 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  46. Published

    Fully automatic cartilage morphometry for knee MRI from the OAI

    Dam, E., Marques, J., Zaim, S., Fuerst, T., Genant, H., Lillholm, Martin & Nielsen, Mads, 2012. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  47. Fully automatic estimation of film-based breast percentage density separate out postmenopausal hormone replacement treatment effects as well as expert's estimation

    Petersen, K., Chernoff, K., Karemore, G. R., Christiansen, C. & Nielsen, Mads, 2012, In: European Journal of Cancer. 48, Supplement 1, p. S145 1 p., 351.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  48. Published

    Hippocampal texture provides volume independent information for Alzheimer's diagnosis

    Sørensen, L., Pai, A. S. U., Darkner, Sune, Suhy, J., Oh, J., Chen, G., Igel, Christian & Nielsen, Mads, 2012, In: Alzheimer's & Dementia. 8, 4, Supplement, p. 15 1 p., IC-P-013.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  49. Published

    Kernel bundle EPDiff: Evolution equations for multi-scale diffeomorphic image registration

    Sommer, Stefan Horst, Lauze, Francois Bernard, Nielsen, Mads & Pennec, X., 2012, Scale Space and Variational Methods in Computer Vision - Third International Conference, SSVM 2011, Revised Selected Papers: Third International Conference, SSVM 2011, Ein-Gedi, Israel, May 29 – June 2, 2011, Revised Selected Papers. Bruckstein, A., ter Haar Romeny, B. M., Bronstein, A. M. & Bronstein, M. M. (eds.). Springer, p. 677-688 12 p. (Lecture notes in computer science, Vol. 6667).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  50. Published

    Mammographic parenchymal texture analysis for estrogen-receptor subtype specific breast cancer risk estimation

    Karemore, G., Keller, B. M., Oh, H., Tchou, J., Nielsen, Mads, Conant, E. F. & Kontos, D., 2012, Breast Imaging: 11th International Workshop, IWDM 2012, Philadelphia, PA, USA, July 8-11, 2012. Proceedings. Maidment, A. D. A., Bakic, P. R. & Gavenonis, S. (eds.). Springer, p. 596-603 8 p. (Lecture notes in computer science, Vol. 7361).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  51. Published

    Mass preserving image registration for lung CT

    Gorbunova, V., Sporring, Jon, Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, Mads, Dirksen, A. & de Bruijne, Marleen, 2012, In: Medical Image Analysis. 16, 4, p. 786-795 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Metric learning by directly minimizing the k-NN training error

    Chernoff, K., Loog, M. & Nielsen, Mads, 2012, 2012 21st International Conference on Pattern Recognition (ICPR). IEEE, p. 1265-1268 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  53. Published

    Shape-based assessment of vertebral fracture risk in postmenopausal women using discriminative shape alignment

    Crimi, A., Loog, M., de Bruijne, Marleen, Nielsen, Mads & Lillholm, Martin, 2012, In: Academic Radiology. 19, 4, p. 446-454 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Sparsity and scale: compact representations of deformation for diffeomorphic registration

    Sommer, Stefan Horst, Nielsen, Mads & Pennec, X., 2012, 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA). IEEE, p. 217-224 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  55. Published

    Texture-based analysis of COPD: a data-driven approach

    Sørensen, L., Nielsen, Mads, Lo, P. C. P., Ashraf, H., Pedersen, J. J. H. & de Bruijne, Marleen, 2012, In: I E E E Transactions on Medical Imaging. 31, 1, p. 70-78 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Towards exaggerated emphysema stereotypes

    Chen, C., Sørensen, L., Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, A., de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (eds.). SPIE - International Society for Optical Engineering, 13 p. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 7964). (Progress in Biomedical Optics and Imaging; No. 31, Vol. 13).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  57. 2011
  58. Published

    A geometric framework for statistics on trees

    Feragen, A., Nielsen, Mads, Hauberg, S., Lo, P. C. P., de Bruijne, Marleen & Lauze, Francois Bernard, 2011, Department of Computer Science, University of Copenhagen. 47 p. (Koebenhavns Universitet. Datalogisk Institut. Rapport; No. 11/02).

    Research output: Book/Report › Report › Research

  59. Published

    A multi-scale kernel bundle for LDDMM: towards sparse deformation description across space and scales

    Sommer, Stefan Horst, Nielsen, Mads, Lauze, Francois Bernard & Pennec, X., 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 624-35 12 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  60. Published

    A novel and automatic mammographic texture resemblance marker is an independent risk factor for breast cancer

    Nielsen, Mads, Karemore, G., Loog, M., Raundahl, J., Karssemeijer, N., Otten, J. D. M., Karsdal, M. A., Vachon, C. M. & Christiansen, C., 2011, In: Cancer Epidemiology. 35, 4, p. 381–387 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Abdominal aortic calcification quantified by the Morphological Atherosclerotic Calcification Distribution (MACD) index is associated with features of the metabolic syndrome

    Barascuk, N., Ganz, Melanie, Nielsen, Mads, Register, T. C., Rasmussen, L. M., A. Karsdal, M. & Christiansen, C., 2011, In: B M C Cardiovascular Disorders. 11, 9 p., 11.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    An airway tree-shape model for geodesic airway branch labeling

    Feragen, A., Lo, P. C. P., Gorbunova, V., Nielsen, Mads, Dirksen, A., Reinhardt, J. M., Lauze, Francois Bernard & de Bruijne, Marleen, 2011, MFCA 2011: 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy. Pennec, X., Joshi, S. & Nielsen, M. (eds.). p. 123-134 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  63. Published

    An anatomically oriented breast coordinate system for mammogram analysis

    Brandt, S., Karemore, G., Karssemeijer, N. & Nielsen, Mads, 2011, In: I E E E Transactions on Medical Imaging. 30, 10, p. 1841-1851 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Accepted/In press

    Anatomic breast coordinate system for mammogram analysis: 5th International Workshop on Breast Densitometry and Breast Cancer Risk Assessment ,San Francisco, United States

    Karemore, G., Brandt, S., Karssemeijer, N. & Nielsen, Mads, 2011, (Accepted/In press).

    Research output: Contribution to conference › Conference abstract for conference › Research

  65. Published

    Anatomy driven breast coordinate system for mammogram analysis

    Brandt, S. S., Karemore, G. R., Karssemeijer, N. & Nielsen, Mads, 2011. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  66. Published

    Automatic breast cancer risk assessment from digital mammograms

    Karemore, G. R., Brandt, S., Karssemeijer, N. & Nielsen, Mads, 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  67. Published

    Automatic segmentation of vertebrae from radiographs: a sample-driven active shape model approach

    Mysling, P., Petersen, P. K., Nielsen, Mads & Lillholm, Martin, 2011, Machine Learning in Medical Imaging: Second International Workshop, MLMI 2011, Held in Conjunction with MICCAI 2011, Toronto, Canada, September 18, 2011. Proceedings. Suzuki, K., Wang, F., Shen, D. & Yan, P. (eds.). Springer, p. 10-17 8 p. (Lecture notes in computer science, Vol. 7009).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  68. Published

    Combining different views of mammographic texture resemblance (MTR) marker of breast cancer risk

    Sun, S., Karemore, G., Chernoff, K., Karssemeijer, N. & Nielsen, Mads, 2011. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  69. Published

    Conditional point distribution models

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2011, Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging: International MICCAI Workshop, MCV 2010, Beijing, China, September 20, 2010, Revised Selected Papers. Menze, B., Langs, G., Tu, Z. & Criminisi, A. (eds.). Springer, p. 1-10 10 p. (Lecture notes in computer science, Vol. 6533).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  70. Published

    Diagnosis of early osteoarthritis by knee joint congruity quantified automatically from MRI

    Tummala, S., Dam, E. B. & Nielsen, Mads, 2011, In: Osteoarthritis and Cartilage. 19, Supplement 1, p. S51 1 p., 98.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  71. Published

    Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, de Bruijne, Marleen, Dam , E., Karsdal , M. & Christiansen , C., 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  72. Published

    Estimating risk of future fracture or deformity of vertebrae of spine, by comparing processed data representing appearance of vertebra of spine with statistical model and deriving similarity between vertebra of spine and model

    Ghosh, A., Nielsen, Mads, Karsdal, M. A., Christiansen, C., de Bruijne, Marleen & Petterson, P., 2011, IPC No. G06T-007/00, Patent No. WO2009124995-A1, 15 Oct 2009, Priority date 10 Apr 2008, Priority No. GB006509

    Research output: Patent

  73. Published

    Exploring the representation capabilities of the HOG descriptor

    Tatu, A. J., Lauze, Francois Bernard, Nielsen, Mads & Kimia, B., 2011, 2011 IEEE International Conference on Computer Vision Workshops (ICCV Workshops). IEEE, p. 1410-1417 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  74. Published

    Geometries on spaces of treelike shapes

    Feragen, A., Lauze, Francois Bernard, Lo, P. C. P., de Bruijne, Marleen & Nielsen, Mads, 2011, Computer Vision – ACCV 2010 : 10th Asian Conference on Computer Vision, Queenstown, New Zealand, November 8-12, 2010, Revised Selected Papers, Part II. Kimmel, R., Klette, R. & Sugimoto, A. (eds.). Springer, p. 160-173 14 p. (Lecture notes in computer science, Vol. 6493).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  75. Published

    Longitudinal analysis of airways using registration

    Petersen, Jens, Gorbunova, V., Nielsen, Mads, Dirksen, A., Lo, P. C. P. & de Bruijne, Marleen, 2011, The Fourth International Workshop on Pulmonary Image Analysis. Beichel, R., de Bruijne, M., van Ginneken, B., Kabus, S., Kiraly, A., Kuhnigk, J-M., McClelland, J., Mori, K., van Rikxoort, E. & Rit, S. (eds.). CreateSpace Independent Publishing Platform , p. 11-22 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  76. Published

    Mammographic Texture Resemblance generalizes as an independent risk factor of breast cancer

    Chernoff, K., Christopher, S. G., Karemore, G., Karssemeijer, N., Nielsen, Mads & Vachon, C. M., 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  77. Published

    Maximum a posteriori estimation of linear shape variation with application to vertebra and cartilage modeling

    Crimi, A., Lillholm, Martin, Nielsen, Mads, Ghosh, A., de Bruijne, Marleen, Dam, E. B. & Sporring, Jon, 2011, In: IEEE Transactions on Medical Imaging. 30, 8, p. 1514-1526 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Means in spaces of tree-like shapes

    Feragen, A., Hauberg, S., Nielsen, Mads & Lauze, Francois Bernard, 2011, 2011 IEEE International Conference on Computer Vision (ICCV). IEEE, p. 739-746 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  79. Published

    Method for computerized classification of e.g. computed tomography image, of lung of patient suffering from e.g. non-focal lung disease, involves combining probabilities within regions of interest to obtain quantitative fused probability

    Nielsen, Mads, de Bruijne, Marleen & Sørensen, L., 2011, IPC No. G06K-009/00, Patent No. US2011280457-A1, 17 Nov 2011, Priority date 11 May 2010, Priority No. US333513P

    Research output: Patent

  80. Published

    Multi-hypothesis Transform Domain Wyner-Ziv video coding including optical flow

    Huang, X., Rakêt, L. L., Luong, H. V., Nielsen, Mads, Lauze, Francois Bernard & Forchhammer, S., 2011, 2011 IEEE 13th International Workshop on Multimedia Signal Processing (MMSP). IEEE, 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  81. Published

    Novel classification using adaptive metric k-NN

    Chen, C., Chernoff, K., Karemore, G., Lo, P. C. P., Nielsen, Mads & Lauze, Francois Bernard, 2011. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  82. Published

    Optimal graph based segmentation using flow lines with application to airway wall segmentation

    Petersen, Jens, Nielsen, Mads, Lo, P. C. P., Saghir, Z., Dirksen, A. & de Bruijne, Marleen, 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (eds.). Springer, p. 49-60 12 p. (Lecture notes in computer science, Vol. 6801).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  83. Published

    Proceedings of the Third International Workshop on Mathematical Foundations of Computational Anatomy: geometrical and statistical methods for modelling biological shape variability

    Pennec, X. (ed.), Joshi, S. (ed.) & Nielsen, Mads (ed.), 2011, HAL. 200 p.

    Research output: Book/Report › Book › Research › peer-review

  84. Published

    TV-L1 optical flow for vector valued images

    Rakêt, L. L., Roholm, L., Nielsen, Mads & Lauze, Francois Bernard, 2011, Energy Minimization Methods in Computer Vision and Pattern Recognition: 8th International Conference, EMMCVPR 2011, St. Petersburg, Russia, July 25-27, 2011. Proceedings. Boykov, Y., Kahl, F., Lempitsky, V. & Schmidt, F. R. (eds.). Springer, p. 329-343 15 p. (Lecture notes in computer science, Vol. 6819).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  85. Published

    Towards exaggerated image stereotypes

    Chen, C., Lauze, Francois Bernard, Igel, Christian, Feragen, A., Loog, M. & Nielsen, Mads, 2011, Proceedings of The First Asian Conference on Pattern Recognition 2011, . p. 422-426 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  86. Published

    Vertebral fracture risk (VFR) score for fracture prediction in postmenopausal Women

    Lillholm, Martin, Ghosh, A., Pettersen, P. C., de Bruijne, Marleen, Dam, E. B., Karsdal, M. A., Christiansen, C., Genant, H. K. & Nielsen, Mads, 2011, In: Osteoporosis International. 22, 7, p. 2119-2128 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Video super-resolution using simultaneous motion and intensity calculations

    Keller, S. H., Lauze, Francois Bernard & Nielsen, Mads, 2011, In: IEEE Transactions on Image Processing. 20, 7, p. 1870-1884 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. 2010
  89. Published

    A framework for optimizing measurement weight maps to minimize the required sample size

    Qazi, A. A., Jørgensen, D. R., Lillholm, Martin, Loog, M., Nielsen, Mads & Dam, Erik Bjørnager, 2010, In: Medical Image Analysis. 14, 3, p. 255-264 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    A static SMC sampler on shapes for the automated segmentation of aortic calcifications

    Petersen, P. K., Nielsen, Mads & Brandt, S. S., 2010, Computer Vision – ECCV 2010: 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September 5-11, 2010, Proceedings, Part IV. Daniilidis, K., Maragos, P. & Paragios, N. (eds.). Springer, p. 666-679 14 p. (Lecture notes in computer science, Vol. 6314).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  91. Published

    An automatic framework for assessing breast cancer risk due to various hormone replacement therapies (HRT): a novel CAD application in digital mammography

    Karemore, G., Brandt, S. & Nielsen, Mads, 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

  92. Published

    Anisotropic diffusion tensor applied to temporal mammograms: an application to breast cancer risk assessment

    Karemore, G., Brandt, S., Sporring, Jon & Nielsen, Mads, 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 3178-3181 4 p. (I E E E Engineering in Medicine and Biology Society. Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  93. Published

    Breast density changes associated with postmenopausal hormone replacement therapy: post hoc radiologist- and computer-based analyses.

    Nielsen, Mads, Pettersen, P., Alexandersen, P., Karemore, G., Raundahl, J., Loog, M. & Christiansen, C., 2010, In: Menopause . 17, 4, p. 772-778 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Classification in medical image analysis using adaptive metric k-NN

    Chen, C., Chernoff, K., Karemore, G., Lo, P. C. P., Nielsen, Mads & Lauze, Francois Bernard, 2010, Medical Imaging 2010: image processing. Dawant, B. M. & Haynor, D. R. (eds.). SPIE - International Society for Optical Engineering, 9 p. 76230S. (Progress in Biomedical Optics and Imaging; No. 33, Vol. 11).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  95. Published

    Classification of protein profiles using fuzzy clustering techniques: an application in early diagnosis of oral, cervical and ovarian cancer

    Karemore, G., Mullick, J. B., Sujatha, R., Nielsen, Mads & Santhosh, C., 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 6361-6364 4 p. (I E E E Engineering in Medicine and Biology Society. Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  96. Published

    Den digitale revolution: fortællinger fra datalogiens verden

    Naur, P., Vinter, B., Hansen, Klaus, Mogensen, Torben Ægidius, Erleben, Kenny, Pisinger, D., Nielsen, Mads, Kringelbach, M., Pedersen, E. W., Blume, P., Helles, Rasmus, Andersen, Tariq Osman (ed.), Bansler, Jørgen P. (ed.), Clausen, H. R. (ed.), Jensen, I. H. (ed.) & Zachariasen, M. (ed.), 2010, København: Datalogisk Institut. 156 p.

    Research output: Book/Report › Anthology › Communication

  97. Published

    Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women

    Nielsen, Mads, Ganz, Melanie, Lauze, Francois Bernard, Pettersen, P. C., de Bruijne, Marleen, Clarkson, T. B., Dam, E. B., Christiansen, C. & Karsdal, M. A., 2010, In: BMC Cardiovascular Disorders. 10, 10 p., 56.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Early detection of emphysema progression

    Gorbunova, V., Jacobs, S. S. A. M., Lo, P. C. P., Dirksen, A., Nielsen, Mads, Bab-Hadiashar, A. & de Bruijne, Marleen, 2010, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2010: 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part II. Jiang, T., Navab, N., Pluim, J. P. W. & Viergever, M. A. (eds.). Springer, Vol. Part II. p. 193-200 8 p. (Lecture notes in computer science; No. 6362).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  99. Published

    Fundamental geodesic deformations in spaces of treelike shapes

    Feragen, A., Lauze, Francois Bernard & Nielsen, Mads, 2010, 20th International Conference on Pattern Recogniction - ICPR 2010. IEEE, p. 2089-2093 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  100. Published

    Growth patterns of abdominal atherosclerotic calcified deposits from lumbar lateral X-rays

    Erleben, L. L., Ganz, Melanie, Barascuk, N., Dam, E. B. & Nielsen, Mads, 2010, In: International Journal of Cardiovascular Imaging. 26, 7, p. 751-761 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    MACD - an imaging marker for cardiovascular disease

    Ganz, Melanie, de Bruijne, Marleen & Nielsen, Mads, 2010, Medical Imaging 2010: computer-aided diagnosis. Karssemeijer, N. & Summers, R. M. (eds.). SPIE - International Society for Optical Engineering, 9 p. 76240

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  102. Published

    Manifold valued statistics, exact principal geodesic analysis and the effect of linear approximations

    Sommer, Stefan Horst, Lauze, Francois Bernard, Hauberg, S. & Nielsen, Mads, 2010, Computer Vision - ECCV 2010: 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September 5-11, 2010, Proceedings, Part VI. Daniilidis, K., Maragos, P. & Paragios, N. (eds.). Springer, Vol. Part VI. p. 43-56 14 p. (Lecture notes in computer science; No. 6316).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  103. Published

    Markov random fields on triangle meshes

    Andersen, V., Aanæs, H., Bærentzen, J. A. & Nielsen, Mads, 2010, WSCG 2010: communication papers proceedings . Skala, V. (ed.). Vaclav Skala - Union Agency, p. 265-270 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  104. Published

    Method for identifying region of interest (ROI) in human organ for performing e.g. knee cartilage quantification, involves calculating weight of feature of image in map for minimizing sample size needed to discriminate between groups

    Dam, E. B., Nielsen, Mads, Qazi, A. A., Lillholm, Martin & Jørgensen, D. R., 2010, IPC No. G06K-009/00, Patent No. US2010232671-A1, 16 Sep 2010, Priority date 17 Dec 2008, Priority No. US203094P

    Research output: Patent

  105. Published

    On restricting planar curve evolution to finite dimensional implicit subspaces with non-Euclidean metric

    Tatu, A. J., Lauze, Francois Bernard, Sommer, Stefan Horst & Nielsen, Mads, 2010, In: Journal of Mathematical Imaging and Vision. 38, 3, p. 226-240 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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