thw266 KU
Professor, Affiliate Professor
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Genomic signatures of evolutionary transitions from solitary to group living
Kapheim, K. M., Pan, H., Li, C., Salzberg, S. L., Puiu, D., Magoc, T., Robertson, H. M., Hudson, M. E., Venkat, A., Fischman, B. J., Hernandez, A., Yandell, M., Ence, D., Holt, C., Yocum, G. D., Kemp, W. P., Bosch, J., Waterhouse, R. M., Zdobnov, E. M., Stolle, E. & 32 others, , 2015, In: Science (New York, N.Y.). 348, 6239, p. 1139-1143 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species
Li, S., Li, B., Cheng, C., Xiong, Z., Liu, Q., Lai, J., Carey, H. V., Zhang, Q., Zheng, H., Wei, S., Zhang, H., Chang, L., Liu, S., Zhang, S., Yu, B., Zeng, X., Hou, Y., Nie, W., Guo, Y., Chen, T. & 13 others, , 2014, In: Genome Biology (Online Edition). 15, 16 p., 557.Research output: Contribution to journal › Journal article › Research › peer-review
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Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Puetz, Lara Christine, Delmont, T. O., Aizpurua Arrieta, Ostaizka, Guo, C., KU, thw266, Katajamaa, R., Jensen, P. & Gilbert, M Thomas P, 2021, In: Advanced Genetics. 2, 4, 12 p., 2100018.Research output: Contribution to journal › Journal article › Research › peer-review
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Hairs distinguish castes and sexes: identifying the early ontogenetic building blocks of a fungus-farming superorganism (Hymenoptera: Formicidae)
Adams, R. M. M., Larsen, Rasmus Stenbak, Stylianidi, N., Cheung, D., Qiu, Bitao, Murray, S. K., KU, thw266 & Boomsma, Jacobus J., 2021, In: Myrmecological News. 31, p. 201-216 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Harvesting the fruits of the first stage of the Primate Genome Project
Guo, Y. T., Shao, Y., Bi, X., Zhang, B. L., Wu, H., Zhou, Y., Li, M. L., Yu, L., KU, thw266, Wu, D. D. & Qi, X. G., 2023, In: Zoological research. 44, 4, p. 725-728 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
High Rate of Chimeric Gene Origination by Retroposition in Plant Genomes
Wang, W., Zheng, H., Fan, C., Li, J., Shi, J., Cai, Z., KU, thw266, Liu, D., Zhang, J., Vang, S., Lu, Z., Wong, G. K., Long, M. & Wang, J., 2006, In: Plant Cell. 18, 8, p. 1791-1802 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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High-coverage genomes to elucidate the evolution of penguins
Pan, H., Cole, T. L., Bi, X., Fang, M., Zhou, C., Yang, Z., Ksepka, D. T., Hart, T., Bouzat, J. L., Argilla, L. S., Bertelsen, M. F., Boersma, P. D., Bost, C. A., Cherel, Y., Dann, P., Fiddaman, S. R., Howard, P., Labuschagne, K., Mattern, T., Miller, G. & 26 others, , 2019, In: GigaScience. 8, 9, p. 1-17Research output: Contribution to journal › Journal article › Research › peer-review
High-coverage sequencing and annotated assemblies of the budgerigar genome
Ganapathy, G., Howard, J. T., Ward, J. M., Li, J., Li, B., Li, Y., Xiong, Y., Zhang, Y., Zhou, S., Schwartz, D. C., Schatz, M., Aboukhalil, R., Fedrigo, O., Bukovnik, L., Wang, T., Wray, G., Rasolonjatovo, I., Winer, R., Knight, J. R., Koren, S. & 4 others, , 8 Jul 2014, In: GigaScience. 3, 1, 11.Research output: Contribution to journal › Journal article › Research › peer-review
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High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps
Georges, A., Li, Q., Lian, J., O'Meally, D., Deakin, J., Wang, Z., Zhang, P., Fujita, M., Patel, H. R., Holleley, C. E., Zhou, Y., Zhang, X., Matsubara, K., Waters, P., Graves, J. A. M., Sarre, S. D. & KU, thw266, 2015, In: GigaScience. 4, 10 p., 45.Research output: Contribution to journal › Journal article › Research › peer-review
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High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis
Gao, Q., Xiong, Z., Larsen, Rasmus Stenbak, Zhou, L., Zhao, J., Ding, G., Zhao, R., Liu, C., Ran, H. & KU, thw266, 2020, In: GigaScience. 9, 12, 14 p., giaa143.Research output: Contribution to journal › Journal article › Research › peer-review
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Historic Sampling of a Vanishing Beast: Population Structure and Diversity in the Black Rhinoceros
Sánchez-Barreiro, F., Westbury, Binia De Cahsan, Westbury, Michael Vincent, Sun, Xin, Margaryan, Ashot, Fontsere, Claudia, Bruford, M. W., Russo, I. M., Kalthoff, D. C., Sicheritz-Pontén, Thomas, Petersen, Bent, Dalén, L., KU, thw266, Marquès-Bonet, T., Gilbert, M Thomas P & Moodley, Y., 2023, In: Molecular Biology and Evolution. 40, 9, 19 p., msad180.Research output: Contribution to journal › Journal article › Research › peer-review
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Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)
Sánchez-Barreiro, F., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Westbury, Michael Vincent, de Manuel, M., Margaryan, Ashot, Ciucani, M. M., Vieira, Filipe Garrett, Patramanis, Ioannis, Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, Thomas, Dalén, L., Ryder, O. A., KU, thw266, Marques-Bonet, T., Moodley, Y. & Gilbert, M Thomas P, 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat
Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, , 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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How genomics can help biodiversity conservation
The European Reference Genome Atlas Consortium, T. E. R. G. A. C., 2023, In: Trends in Genetics. 39, 7, 15 p.Research output: Contribution to journal › Review › Research › peer-review
Identification and characterization of insect-specific proteins by genome data analysis
KU, thw266, Wang, H., Shi, J., Wang, X., Zheng, H., Wong, G. K., Clark, T., Wang, W., Wang, J. & Kang, L., 2007, In: B M C Genomics. 8, 11 p., 93.Research output: Contribution to journal › Journal article › Research › peer-review
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Identification and evolution of avian endogenous foamy viruses
Chen, Y., Wei, X., KU, thw266, Holmes, E. C. & Cui, J., 2019, In: Virus Evolution. 5, 2, 6 p., vez049.Research output: Contribution to journal › Journal article › Research › peer-review
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Identification of constrained sequence elements across 239 primate genomes
Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J. & 72 others, , 2024, In: Nature. 625, p. 735–742 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Improving the ostrich genome assembly using optical mapping data
Zhang, J., Li, C., Zhou, Q. & KU, thw266, 2015, In: GigaScience. 4, 3 p., 24.Research output: Contribution to journal › Journal article › Research › peer-review
In-Depth Tanscriptomic Analysis on Giant Freshwater Prawns
Mohd-Shamsudin, M. I., Kang, Y., Lili, Z., Tan, T. T., Kwong, Q. B., Liu, H., KU, thw266, Othman, R. Y. & Bhassu, S., 2013, In: PLoS ONE. 8, 5, 14 p., e60839.Research output: Contribution to journal › Journal article › Research › peer-review
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Incomplete lineage sorting and phenotypic evolution in marsupials
Feng, S., Bai, M., Rivas-González, I., Li, C., Liu, S., Tong, Y., Yang, H., Chen, G., Xie, D., Sears, K. E., Franco, L. M., Gaitan-Espitia, J. D., Nespolo, R. F., Johnson, W. E., Yang, H., Brandies, P. A., Hogg, C. J., Belov, K., Renfree, M. B., Helgen, K. M. & 3 others, , 2022, In: Cell. 185, 10, p. 1646-1660.e18Research output: Contribution to journal › Journal article › Research › peer-review
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Initiation of the Primate Genome Project
Wu, D., Qi, X., Yu, L., Li, M., Liu, Z., Yoder, A. D., Roos, C., Hayakawa, T., Rogers, J., Marques-Bonet, T., Su, B., Yao, Y., Zhang, Y. & KU, thw266, 2022, In: Zoological research. 43, 2, p. 147-149 3 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
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Labour classified by cervical dilatation & fetal membrane rupture demonstrates differential impact on RNA-seq data for human myometrium tissues
Lai, P. F., Lei, K., Zhan, X., Sooranna, G., Li, J. K. H., Georgiou, E. X., Das, A., Singh, N., Li, Q., Stanfield, Z., KU, thw266, Tribe, R. M., Mesiano, S. & Johnson, M. R., 2021, In: PLoS ONE. 16, 11, 22 p., e0260119.Research output: Contribution to journal › Journal article › Research › peer-review
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Large-scale genomic analysis reveals the genetic cost of chicken domestication
Wang, M-S., Zhang, J-J., Guo, X., Li, M., Meyer, R., Ashari, H., Zheng, Z-Q., Wang, S., Peng, M-S., Jiang, Y., Thakur, M., Suwannapoom, C., Esmailizadeh, A., Hirimuthugoda, N. Y., Zein, M. S. A., Kusza, S., Kharrati-Koopaee, H., Zeng, L., Wang, Y-M., Yin, T-T. & 23 others, , 2021, In: BMC Biology. 19, 16 p., 118.Research output: Contribution to journal › Journal article › Research › peer-review
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Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
Chen, L., Qin, Q., Jiang, Y., Wang, K., Lin, Z., Li, Z., Bibi, F., Yang, Y., Wang, J., Nie, W., Su, W., Liu, G., Li, Q., Fu, W., Pan, X., Liu, C., Yang, J., Zhang, C., Yin, Y., Wang, Y. & 32 others, , 2019, In: Science. 364, 6446, p. 1152-Research output: Contribution to journal › Journal article › Research › peer-review
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Lineage-specific accelerated sequences underlying primate evolution
Bi, X., Zhou, L., Zhang, J., Feng, S., Hu, M., Cooper, D. N., Lin, J., Li, J., Wu, D. & KU, thw266, 2023, In: Science Advances. 9, 22, 12 p., eadc9507.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 40294134
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3206
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Molecular traces of alternative social organization in a termite genome
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3123
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Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior
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2707
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Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
Research output: Contribution to journal › Journal article › Research › peer-review
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