Jonathan Jan Ilve Thorsen
- 2024
- Published
Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages
Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-term drug survival of adalimumab, infliximab, secukinumab and ustekinumab in hidradenitis suppurativa: A Danish nationwide cohort study
Ring, H. C., Thorsen, Jonathan Jan Ilve, Kirby, B., Ingram, J. R., Rosenø, N. A. L., Holgersen, N., Nielsen, V. W., Nikolai Thein Aagaard, D., Maul, J., Wu, J. J., Thyssen, Jacob Pontoppidan, Egeberg, Alexander & Thomsen, Simon Francis, 2024, In: British Journal of Dermatology, Supplement. 190, 5, p. 769–771Research output: Contribution to journal › Comment/debate › Research › peer-review
- 2023
- Published
Can breastfeeding promote an antibiotic-resilient microbiome?
Stokholm, Jakob & Thorsen, Jonathan Jan Ilve, 2023, In: Med. 4, 2, p. 67-68 2 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Expanding known viral diversity in the healthy infant gut
Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, , 2023, In: Nature Microbiology. 8, p. 986–998Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases
Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Middle ear effusion, ventilation tubes and neurological development in childhood
Thorsen, Jonathan Jan Ilve, Pedersen, T. M., Cecilie Mora-Jensen, A. R., Bjarnadó ttir, E., Bager, S. C., Bisgaard, H. & Stokholm, Jakob, 2023, In: PLoS ONE. 18, 1, 14 p., e0280199.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oropharyngeal Microbiota Clusters in Children with Asthma or Wheeze Associate with Allergy, Blood Transcriptomic Immune Pathways, and Exacerbation Risk
U-BIOPRED Study Group, U. S. G., 2023, In: American Journal of Respiratory and Critical Care Medicine. 208, 2, p. 142-154 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Risk Factors and Age-Related Patterns of Asthma-Like Symptoms in Early Childhood
Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Horner, David Lyle George, Hesselberg, L. M., Melgaard, M. E., Jensen, S. K., Schoos, Ann-Marie Malby, Thorsen, Jonathan Jan Ilve, Pedersen, C. E. T., Brustad, N., Bønnelykke, Klaus, Bisgaard, H. & Stokholm, Jakob, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 6, p. 1773-1784.e10 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria
Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Amplicon sequencing demonstrates comparable follicular mycobiomes in patients with hidradenitis suppurativa compared with healthy controls
Ring, H. C., Thorsen, Jonathan Jan Ilve, Fuursted, K., Bjarnsholt, Thomas, Bay, Lene, Egeberg, Alexander, Ingham, Andreas, Vedel Nielsen, H., Frew, J. W., Saunte, Ditte Marie, Thomsen, Simon Francis & Jemec, Gregor, 2022, In: Journal of the European Academy of Dermatology and Venereology. 36, 7, p. e580-e583 4 p.Research output: Contribution to journal › Comment/debate › Research
ID: 215672837
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Maturation of the gut microbiome and risk of asthma in childhood
Research output: Contribution to journal › Journal article › Research › peer-review
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391
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
Research output: Contribution to journal › Journal article › Research › peer-review
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277
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published