Jan Gorodkin

Jan Gorodkin

Professor

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    1. Published

      Maximum likelihood estimation of weight matrices for targeted homology search

      Menzel, P., Gorodkin, Jan & Stadler, P. F., 2009, Proceedings of the German Conference on Bioinformatics 2009. Grosse, I., Neumann, S., Posch, S., Schreiber, F. & Stadler, P. (eds.). Gesellschaft für Informatik, p. 211-220 10 p. (Lecture Notes in Informatics).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    2. Published

      Massively targeted evaluation of therapeutic CRISPR off-targets in cells

      Pan, X., Qu, K., Yuan, H., Xiang, X., Anthon, C., Pashkova, L., Liang, X., Han, P., Corsi, G. I., Xu, F., Liu, P., Zhong, J., Zhou, Y., Ma, T., Jiang, H., Liu, J., Wang, J., Jessen, N., Bolund, L., Yang, H. & 5 others, Xu, X., Church, G. M., Gorodkin, Jan, Lin, L. & Luo, Y., 2022, In: Nature Communications. 13, 14 p., 4049.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Mapping and expression studies of the mir17-92 cluster on pig chromosome 11

      Sawera, M., Gorodkin, Jan, Cirera, Susanna & Fredholm, Merete, 2005, In: Mammalian Genome. 16, 8, p. 594-598 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Linkage mapping of gene-associated SNPs to pig chromosome 11

      Sawera, M., Cirera, Susanna, Jørgensen, Claus Bøttcher, Gorodkin, Jan & Fredholm, Merete, 2006, In: Animal Genetics. 37, 3, p. 199-204 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Letter to the editor: Testing on external independent datasets is necessary to corroborate machine learning model improvement

      Corsi, G. I., Anthon, Christian & Gorodkin, Jan, 2023, In: Bioinformatics. 39, 6, btad327.

      Research output: Contribution to journal › Letter › Research › peer-review

    6. Published

      Joint profiling of miRNAs and mRNAs reveals miRNA mediated gene regulation in the Göttingen minipig obesity model

      Mentzel, Caroline M. Junker, Alkan, F., Keinicke, H., Jacobsen, M. J., Gorodkin, Jan, Fredholm, Merete & Cirera, Susanna, 30 Nov 2016, In: P L o S One. 11, 11, 16 p., e0167285.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Inferring disease-associated long non-coding RNAs using genome - wide tissue expression profiles

      Pan, X., Jensen, Lars Juhl & Gorodkin, Jan, 2019, In: Bioinformatics. 35, 9, p. 1494-1502 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Identification of 10 882 porcine microsatellite sequences and virtual mapping of 4528 of these sequences

      Karlskov-Mortensen, Peter, Hu, Z. L., Gorodkin, Jan, Reecy, J. M. & Fredholm, Merete, 2007, In: Animal Genetics. 38, 4, p. 401-405 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Identification and characterization of novel conserved RNA structures in Drosophila

      Kirsch, Rebecca, Seemann, Ernst Stefan, Ruzzo, W. L., Cohen, S. M., Stadler, P. F. & Gorodkin, Jan, 2018, In: BMC Genomics. 19, 20 p., 899.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      IFN-λ and microRNAs are important modulators of the pulmonary innate immune response against influenza A (H1N2) infection in pigs

      Brogaard, L., Larsen, Lars, Heegaard, P. M. H., Anthon, Christian, Gorodkin, Jan, Dürrwald, R. & Skovgaard, K., 2018, In: PLOS ONE. 13, 4, 23 p., e0194765.

      Research output: Contribution to journal › Journal article › Research › peer-review

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