thw266 KU

thw266 KU

Professor, Affiliate Professor

Member of:


    1. 2015
    2. Published

      Phylogenomic analyses data of the avian phylogenomics project

      Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Rodrigues da Fonseca, R. A., Alfaro Nuñez, L. A., Narula, N., Liu, L., Burt, D., Ellegren, H., Edwards, S. V., Stamatakis, A. & 7 others, Mindell, D. P., Cracraft, J., Braun, E. L., Warnow, T., Wang, J., Gilbert, M Thomas P & KU, thw266, 2015, In: GigaScience. 4, 9 p., 4.

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      Genomic signatures of evolutionary transitions from solitary to group living

      Kapheim, K. M., Pan, H., Li, C., Salzberg, S. L., Puiu, D., Magoc, T., Robertson, H. M., Hudson, M. E., Venkat, A., Fischman, B. J., Hernandez, A., Yandell, M., Ence, D., Holt, C., Yocum, G. D., Kemp, W. P., Bosch, J., Waterhouse, R. M., Zdobnov, E. M., Stolle, E. & 32 others, Kraus, F. B., Helbing, S., Moritz, R. F. A., Glastad, K. M., Hunt, B. G., Goodisman, M. A. D., Hauser, Frank, Grimmelikhuijzen, Cornelis (Cok), Pinheiro, D. G., Nunes, F. M. F., Soares, M. P. M., Tanaka, É. D., Simões, Z. L. P., Hartfelder, K., Evans, J. D., Barribeau, S. M., Johnson, R. M., Massey, J. H., Southey, B. R., Hasselmann, M., Hamacher, D., Biewer, M., Kent, C. F., Zayed, A., Blatti, C., Sinha, S., Johnston, J. S., Hanrahan, S. J., Kocher, S. D., Wang, J., Robinson, G. E. & KU, thw266, 2015, In: Science (New York, N.Y.). 348, 6239, p. 1139-1143 5 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. Published

      Olfactory receptor subgenomes linked with broad ecological adaptations in sauropsida

      Khan, I., Yang, Z., Maldonado, E., Li, C., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D., O'Brien, S. J., Johnson, W. E. & Antunes, A., 2015, In: MOLECULAR BIOLOGY AND EVOLUTION . 32, 11, p. 2832-2843 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      The Genome 10K Project: a way forward

      Koepfli, K-P., Paten, B., O'Brien, S. J., Antunes, A., Belov, K., Bustamante, C., Castoe, T. A., Clawson, H., Crawford, A. J., Diekhans, M., Distel, D., Durbin, R., Earl, D., Fujita, M. K., Gamble, T., Georges, A., Gemmell, N., Gilbert, M. T. P., Graves, J. M., Green, R. E. & 25 others, Hickey, G., Jarvis, E. D., Johnson, W., Komissarov, A., Korf, I., Kuhn, R., Larkin, D. M., Lewin, H., Lopez, J. V., Ma, J., Marques-Bonet, T., Miller, W., Murphy, R., Pevzner, P., Shapiro, B., Steiner, C., Tamazian, G., Venkatesh, B., Wang, J., Wayne, R., Wiley, E., Yang, H., KU, thw266, Haussler, D. & Ryder, O., 2015, In: Annual Review of Animal Biosciences. 3, p. 57-111 55 p.

      Research output: Contribution to journalReviewResearchpeer-review

    6. Published

      A genomic comparison of two termites with different social complexity

      Korb, J., Poulsen, Michael, Hu, H., Li, C., Boomsma, Jacobus J., KU, thw266 & Liebig, J., 2015, In: Frontiers in Genetics. 6, 12 p., 9.

      Research output: Contribution to journalJournal articleResearchpeer-review

    7. Published

      Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies

      Li, X., Fan, D., Zhang, W., Liu, G., Zhang, L., Zhao, L., Fang, X., Chen, L., Dong, Y., Chen, Y., Ding, Y., Zhao, R., Feng, M., Zhu, Y., Feng, Y., Jiang, X., Zhu, D., Xiang, H., Feng, X., Li, S. & 4 others, Wang, J., KU, thw266, Kronforst, M. R. & Wang, W., 2015, In: Nature Communications. 6, 10 p., 8212.

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      Temporal dynamics of avian populations during pleistocene revealed by whole-genome sequences

      Nadachowska-Brzyska, K., Li, C., Smeds, L., KU, thw266 & Ellegren, H., 2015, In: Current Biology. 25, 10, p. 1375-1380 6 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Published

      Ancient population genomics and the study of evolution

      Parks, M., Subramanian, S., Baroni, C., Salvatore, M. C., KU, thw266, Millar, C. D. & Lambert, D. M., 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. Published

      Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes

      Sun, Y-B., Xiong, Z-J., Xiang, X-Y., Liu, S-P., Zhou, W-W., Tu, X-L., Zhong, L., Wang, L., Wu, D-D., Zhang, B-L., Zhu, C-L., Yang, M-M., Chen, H-M., Li, F., Zhou, L., Feng, S-H., Huang, C., Zhang, G., Irwin, D., Hillis, D. M. & 5 others, Murphy, R. W., Yang, H., Che, J., Wang, J. & Zhang, Y., 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 11, p. E1257-E1262 6 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    11. The Genome of Dendrobium officinale Illuminates the Biology of the Important Traditional Chinese Orchid Herb

      Yan, L., Wang, X., Liu, H., Tian, Y., Lian, J., Yang, R., Hao, S., Wang, X., Yang, S., Li, Q., Qi, S., Kui, L., Okpekum, M., Ma, X., Zhang, J., Ding, Z., KU, thw266, Wang, W., Dong, Y. & Sheng, J., 2015, In: Molecular Plant. 8, 6, p. 922-934 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    12. Published

      Bird sequencing project takes off

      KU, thw266, Rahbek, Carsten, Graves, G. R., Jarvis, E. D. & Gilbert, M Thomas P, 2015, In: Nature. 522, 7554, p. 34 1 p.

      Research output: Contribution to journalComment/debateResearchpeer-review

    13. Published

      Improving the ostrich genome assembly using optical mapping data

      Zhang, J., Li, C., Zhou, Q. & KU, thw266, 2015, In: GigaScience. 4, 3 p., 24.

      Research output: Contribution to journalJournal articleResearchpeer-review

    14. 2014
    15. Advances in genome editing technology and its promising application in evolutionary and ecological studies

      Chen, L., Tang, L., Xiang, H., Jin, L., Li, Q., Dong, Y., Wang, W. & KU, thw266, 2014, In: GigaScience. 3, 24, 10 p.

      Research output: Contribution to journalReviewResearchpeer-review

    16. Published

      Low frequency of paleoviral infiltration across the avian phylogeny

      Cui, J., Zhao, W., Huang, Z., Jarvis, E. D., Gilbert, M Thomas P, Walker, P. J., Holmes, E. C. & KU, thw266, 2014, In: Genome Biology (Online Edition). 15, 12, 13 p., 539.

      Research output: Contribution to journalJournal articleResearchpeer-review

    17. Published

      Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes

      Fang, X., Seim, I., Huang, Z., Gerashchenko, M. V., Xiong, Z., Turanov, A. A., Zhu, Y., Lobanov, A. V., Fan, D., Yim, S. H., Yao, X., Ma, S., Yang, L., Lee, S-G., Kim, E. B., Bronson, R. T., Sumbera, R., Buffenstein, R., Zhou, X., Krogh, A. & 4 others, Park, T. J., KU, thw266, Wang, J. & Gladyshev, V. N., 2014, In: Cell Reports. 8, 5, p. 1354-1364 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    18. High-coverage sequencing and annotated assemblies of the budgerigar genome

      Ganapathy, G., Howard, J. T., Ward, J. M., Li, J., Li, B., Li, Y., Xiong, Y., Zhang, Y., Zhou, S., Schwartz, D. C., Schatz, M., Aboukhalil, R., Fedrigo, O., Bukovnik, L., Wang, T., Wray, G., Rasolonjatovo, I., Winer, R., Knight, J. R., Koren, S. & 4 others, Warren, W. C., KU, thw266, Phillippy, A. M. & Jarvis, E. D., 8 Jul 2014, In: GigaScience. 3, 1, 11.

      Research output: Contribution to journalJournal articleResearchpeer-review

    19. Published

      Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

      Green, R. E., Braun, E. L., Armstrong, J., Earl, D., Nguyen, N., Hickey, G., Vandewege, M. W., John, J. A. S., Capella-Gutierrez, S., Castoe, T. A., Kern, C., Fujita, M. K., Opazo, J. C., Jurka, J., Kojima, K. K., Caballero, J., Hubley, R. M., Smit, A. F., Platt, R. N., Lavoie, C. A. & 35 others, Ramakodi, M. P., Finger Jr., J. W., Suh, A., Isberg, S. R., Miles, L., Chong, A. Y., Jaratlerdsiri, W., Gongora, J., Moran, C., Iriarte, A., McCormack, J., Burgess, S. C., Edwards, S. V., Lyons, E., Williams, C., Breen, M., Howard, J. T., Gresham, C. R., Peterson, D. G., Schmitz, J., Pollock, D. D., Haussler, D., Triplett, E. W., KU, thw266, Irie, N., Jarvis, E. D., Brochu, C. A., Schmidt, C. J., McCarthy, F. M., Faircloth, B. C., Hoffmann, F. G., Glenn, T. C., Gabaldon, T., Paten, B. & Ray, D. A., 2014, In: Science. 346, 6215, 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    20. Published

      Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles

      Greenwold, M. J., Bao, W., Jarvis, E. D., Hu, H., Li, C., Gilbert, M Thomas P, KU, thw266 & Sawyer, R. H., 2014, In: B M C Evolutionary Biology. 14, 16 p., 249.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Sensory Rewiring in an Echolocator: Genome-Wide Modification of Retinogenic and Auditory Genes in the Bat Myotis davidii

      Hudson, N. J., Baker, M. L., Hart, N. S., Wynne, J. W., Gu, Q., Huang, Z., KU, thw266, Ingham, A. B., Wang, L. & Reverter, A., 2014, In: G3: Genes, Genomes, Genetics. 4, 10, p. 1825-1835 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    22. Published

      Whole-genome analyses resolve early branches in the tree of life of modern birds

      Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Rodrigues da Fonseca, R. A., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G. & 85 others, Boussau, B., Bayzid, M. S., Zavidovych, V., Subramanian, S., Gabaldón, T., Capella-Gutiérrez, S., Huerta-Cepas, J., Rekepalli, B., Terkelsen, K. M., Schierup, M. H., Lindow, Bent Erik Kramer, Warren, W. C., Ray, D., Green, R. E., Bruford, M. W., Zhan, X., Dixon, A., Li, S., Li, N., Huang, Y., Derryberry, E. P., Bertelsen, Mads Frost, Sheldon, F. H., Brumfield, R. T., Mello, C. V., Lovell, P. V., Wirthlin, M., Schneider, M. P. C., Prosdocimi, F., Samaniego Castruita, J. A., Velazquez, A. M. V., Alfaro Nuñez, L. A., Campos, P., Petersen, Bent, Sicheritz-Ponten, T., Pas, A., Bailey, T., Scofield, P., Bunce, M., Lambert, D. M., Zhou, Q., Perelman, P., Driskell, A. C., Shapiro, B., Xiong, Z., Zeng, Y., Liu, S., Li, Z., Liu, B., Wu, K., Xiao, J., Yinqi, X., Zheng, Q., Zhang, Y., Yang, H., Wang, J., Smeds, L., Rheindt, F. E., Braun, M., Fjeldså, Jon, Orlando, L. A. A., Barker, F. K., Jønsson, Knud Andreas, Johnson, W., Koepfli, K. P., O'Brien, S., Haussler, D., Ryder, O. A., Rahbek, Carsten, Willerslev, Eske, Graves, G. R., Glenn, T. C., McCormack, J., Burt, D., Ellegren, H., Alström, P., Edwards, S. V., Stamatakis, A., Mindell, D. P., Cracraft, J., Braun, E. L., Warnow, T., Wang, J., Gilbert, M Thomas P & KU, thw266, 2014, In: Science. 346, 6215, p. 1320-1331 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    23. Published

      Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment

      Li, C., Zhang, Y., Li, J., Kong, L., Hu, H., Pan, H., Xu, L., Deng, Y., Li, Q., Jin, L., Yu, H., Chen, Y., Liu, B., Yang, L., Liu, S., Zhang, Y., Lang, Y., Xia, J., He, W., Shi, Q. & 21 others, Subramanian, S., Millar, C. D., Meader, S., Rands, C. M., Fujita, M. K., Greenwold, M. J., Castoe, T. A., Pollock, D. D., Gu, W., Nam, K., Ellegren, H., Ho, S. Y., Burt, D. W., Ponting, C. P., Jarvis, E. D., Gilbert, M Thomas P, Yang, H., Wang, J., Lambert, D. M., Wang, J. & KU, thw266, 2014, In: GigaScience. 3, 27, 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    24. Published

      Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior

      Li, Q., Wang, Z., Lian, J., Schiøtt, M., Jin, L., Zhang, P., Zhang, Y., Nygaard, S., Peng, Z., Zhou, Y., Deng, Y., Zhang, W., Boomsma, Jacobus J. & KU, thw266, 2014, In: Nature Communications. 5, 11 p., 4943.

      Research output: Contribution to journalJournal articleResearchpeer-review

    25. Published

      Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species

      Li, S., Li, B., Cheng, C., Xiong, Z., Liu, Q., Lai, J., Carey, H. V., Zhang, Q., Zheng, H., Wei, S., Zhang, H., Chang, L., Liu, S., Zhang, S., Yu, B., Zeng, X., Hou, Y., Nie, W., Guo, Y., Chen, T. & 13 others, Han, J., Wang, J., Wang, J., Chen, C., Liu, J., Stambrook, P. J., Xu, M., KU, thw266, Gilbert, M Thomas P, Yang, H., Jarvis, E. D., Yu, J. & Yan, J., 2014, In: Genome Biology (Online Edition). 15, 16 p., 557.

      Research output: Contribution to journalJournal articleResearchpeer-review

    26. Published

      Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears

      Liu, S., Lorenzen, E., Fumagalli, M., Li, B., Harris, K., Xiong, Z., Zhou, L., Korneliussen, T. S., Somel, M., Babbitt, C., Wray, G., Li, J., He, W., Wang, Z., Fu, W., Xiang, X., Morgan, C. C., Doherty, A., O'Connell, M. J., McInerney, J. O. & 9 others, Born, E. W., Dalén, L., Dietz, R., Orlando, L. A. A., Sonne, C., KU, thw266, Nielsen, Rasmus, Willerslev, Eske & Wang, J., 2014, In: Cell. 157, 4, p. 785-794 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    27. Published

      Evidence for a single loss of mineralized teeth in the common avian ancestor

      Meredith, R. W., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D. & Springer, M. S., 2014, In: Science. 346, 6215, 6 p., 1254390.

      Research output: Contribution to journalJournal articleResearchpeer-review

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    ID: 40294134