Tue Kjærgaard Nielsen

Tue Kjærgaard Nielsen

Tenure Track Assistant Professor


  1. 2017
  2. Evolution of Sphingomonad Gene Clusters Related to Pesticide Catabolism Revealed by Genome Sequence and Mobilomics of Sphingobium herbicidovorans MH

    Nielsen, Tue Kjærgaard, Rasmussen, M., Demanèche, S., Cecillon, S., Vogel, T. M. & Hansen, Lars Hestbjerg, 2017, In: Genome Biology and Evolution. 9, 9, p. 2477-2490

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Soil DNA extraction procedure influences protist 18S rRNA gene community profiling outcome

    Santos, S. S., Nunes, I. M., Nielsen, Tue Kjærgaard, Jacquiod, S. J. A., Hansen, L. H. & Winding, A., Jul 2017, In: Protist. 168, 3, p. 283-293 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. 2018
  5. Published

    Mind the gut: genomic insights to population divergence and gut microbial composition of two marine keystone species

    Fietz, K., Hintze, C. O. R., Skovrind, Mikkel, Nielsen, Tue Kjærgaard, Limborg, Morten Tønsberg, Krag, M. A., Palsboll, P. J., Hansen, L. H., Møller, Peter Rask & Gilbert, M Thomas P, 2018, In: Microbiome. 6, 16 p., 82.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples

    Jacobsen, C. S., Nielsen, T. K., Vester, J. K., Stougaard, P., Nielsen, J. L., Voriskova, J., Winding, A., Baldrian, P., Liu, B., Frostegard, A., Pedersen, D., Tveit, A. T., Svenning, M. M., Tebbe, C. C., Ovreas, L., Jakobsen, P. B., Blazewicz, S. J., Hubablek, V., Bertilsson, S., Hansen, L. H. & 4 others, Cary, S. C., Holben, W. E., Ekelund, Flemming & Bælum, J., 2018, In: Scientific Reports. 8, p. 1-6 6 p., 5711.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    The Genome of BAM-degrading Aminobacter sp. MSH1 with Several Low Copy Plasmids

    Nielsen, Tue Kjærgaard, Hylling, Ole & Ellegaard-Jensen, L., 2018, 12 p.

    Research output: Working paperPreprintResearch

  8. 2019
  9. Expanding the biodiversity of Oenococcus oeni through comparative genomics of apple cider and kombucha strains

    Lorentzen, M. P., Campbell-Sills, H., Jorgensen, T. S., Nielsen, Tue Kjærgaard, Coton, M., Coton, E., Hansen, L. & Lucas, P. M., 2019, In: BMC Genomics. 20, 330.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Complete Genome Sequences of Highly Arsenite-Resistant Bacteria Brevibacterium sp. Strain CS2 and Micrococcus luteus AS2

    Sher, S., Rehman, A., Hansen, Lars Hestbjerg & Nielsen, Tue Kjærgaard, 2019, In: Microbiology Resource Announcements. 8, 31, 2 p., e00531-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. 2020
  12. Published

    GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor organisms

    Browne, Patrick Denis, Nielsen, Tue Kjærgaard, Kot, Witold, Aggerholm, A., Gilbert, M Thomas P, Puetz, Lara Christine, Rasmussen, M., Zervas, A. & Hansen, Lars Hestbjerg, 2020, In: GigaScience. 9, 2, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Bone biodeterioration - The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community

    Eriksen, A. M. H., Nielsen, Tue Kjærgaard, Matthiesen, H., Carøe, C., Hansen, Lars Hestbjerg, Gregory, D. J., Turner-Walker, G., Collins, Matthew James & Gilbert, M Thomas P, 2020, In: PLoS ONE. 15, 10 October, 24 p., e0240512.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Releasing the microbes from old bones: the effect of different DNA extraction protocols on microbial community profiling

    Eriksen, A. M. H., Puetz, Lara Christine, Rocha, C., Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg & Gilbert, M Thomas P, 2020, In: STAR: Science & Technology of Archaeological Research. 6, 1, p. 1-15 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 217134357