Mani Arumugam

Mani Arumugam

Associate Professor


  1. 2019
  2. Published

    Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer. / Wirbel, Jakob; Pyl, Paul Theodor; Kartal, Ece; Zych, Konrad; Kashani, Alireza; Milanese, Alessio; Fleck, Jonas S; Voigt, Anita Y; Palleja, Albert; Ponnudurai, Ruby; Sunagawa, Shinichi; Coelho, Luis Pedro; Schrotz-King, Petra; Vogtmann, Emily; Habermann, Nina; Niméus, Emma; Thomas, Andrew M; Manghi, Paolo; Gandini, Sara; Serrano, Davide; Mizutani, Sayaka; Shiroma, Hirotsugu; Shiba, Satoshi; Shibata, Tatsuhiro; Yachida, Shinichi; Yamada, Takuji; Waldron, Levi; Naccarati, Alessio; Segata, Nicola; Sinha, Rashmi; Ulrich, Cornelia M; Brenner, Hermann; Arumugam, Manimozhiyan; Bork, Peer; Zeller, Georg.

    In: Nature Medicine, Vol. 25, No. 4, 04.2019, p. 679-689.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation. / Thomas, Andrew Maltez; Manghi, Paolo; Asnicar, Francesco; Pasolli, Edoardo; Armanini, Federica; Zolfo, Moreno; Beghini, Francesco; Manara, Serena; Karcher, Nicolai; Pozzi, Chiara; Gandini, Sara; Serrano, Davide; Tarallo, Sonia; Francavilla, Antonio; Gallo, Gaetano; Trompetto, Mario; Ferrero, Giulio; Mizutani, Sayaka; Shiroma, Hirotsugu; Shiba, Satoshi; Shibata, Tatsuhiro; Yachida, Shinichi; Yamada, Takuji; Wirbel, Jakob; Schrotz-King, Petra; Ulrich, Cornelia M; Brenner, Hermann; Arumugam, Manimozhiyan; Bork, Peer; Zeller, Georg; Cordero, Francesca; Dias-Neto, Emmanuel; Setubal, João Carlos; Tett, Adrian; Pardini, Barbara; Rescigno, Maria; Waldron, Levi; Naccarati, Alessio; Segata, Nicola.

    In: Nature Medicine, Vol. 25, No. 4, 04.2019, p. 667-678.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Genes controlling the activation of natural killer lymphocytes are epigenetically remodeled in intestinal cells from germ-free mice. / Poupeau, Audrey; Garde, Christian; Sulek, Karolina; Citirikkaya, Kiymet; Treebak, Jonas T; Arumugam, Manimozhiyan; Simar, David; Olofsson, Louise E; Bäckhed, Fredrik; Barrès, Romain.

    In: FASEB journal : official publication of the Federation of American Societies for Experimental Biology, Vol. 33, No. 2, 02.2019, p. 2719-2731.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Circulating microbiome in blood of different circulatory compartments. / Schierwagen, Robert; Alvarez-Silva, Camila; Madsen, Mette Simone Aae; Kolbe, Carl Christian; Meyer, Carsten; Thomas, Daniel; Uschner, Frank Erhard; Magdaleno, Fernando; Jansen, Christian; Pohlmann, Alessandra; Praktiknjo, Michael; Hischebeth, Gunnar T; Molitor, Ernst; Latz, Eicke; Lelouvier, Benjamin; Trebicka, Jonel; Arumugam, Manimozhiyan.

    In: Gut, Vol. 68, No. 3, 2019, p. 578-580.

    Research output: Contribution to journalLetterResearch

  6. Published

    Compartmentalization of Immune Response and Microbial Translocation in Decompensated Cirrhosis. / Alvarez-Silva, Camila; Schierwagen, Robert; Pohlmann, Alessandra; Magdaleno, Fernando; Uschner, Frank E.; Ryan, Patrick; Vehreschild, Maria J. G. T.; Claria, Joan; Latz, Eicke; Lelouvier, Benjamin; Arumugam, Manimozhiyan; Trebicka, Jonel.

    In: Frontiers in Immunology, Vol. 10, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2018
  8. Published

    Recovery of gut microbiota of healthy adults following antibiotic exposure. / Palleja, Albert; Mikkelsen, Kristian H; Forslund, Sofia K; Kashani, Alireza; Allin, Kristine H; Nielsen, Trine; Hansen, Tue H; Liang, Suisha; Feng, Qiang; Zhang, Chenchen; Pyl, Paul Theodor; Coelho, Luis Pedro; Yang, Huanming; Wang, Jian; Typas, Athanasios; Nielsen, Morten F.; Nielsen, Henrik Bjorn; Bork, Peer; Wang, Jun; Vilsbøll, Tina; Hansen, Torben; Knop, Filip K; Arumugam, Manimozhiyan; Pedersen, Oluf.

    In: Nature Microbiology, Vol. 3, No. 11, 11.2018, p. 1255-1265.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Antifibrotic and molecular aspects of rifaximin in alcoholic liver disease : study protocol for a randomized controlled trial. / Madsen, Bjørn Stæhr; Trebicka, Jonel; Thiele, Maja; Israelsen, Mads; Arumugan, Manimozhiyan; Havelund, Troels; Krag, Aleksander.

    In: Trials, Vol. 19, 143, 2018, p. 1-5.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Enterotypes in the landscape of gut microbial community composition. / Costea, Paul I.; Hildebrand, Falk; Manimozhiyan, Arumugam; Bäckhed, Fredrik; Blaser, Martin J.; Bushman, Frederic D.; De Vos, Willem M.; Ehrlich, S. Dusko; Fraser, Claire M.; Hattori, Masahira; Huttenhower, Curtis; Jeffery, Ian B.; Knights, Dan; Lewis, James D.; Ley, Ruth E.; Ochman, Howard; O'Toole, Paul W.; Quince, Christopher; Relman, David A.; Shanahan, Fergus; Sunagawa, Shinichi; Wang, Jun; Weinstock, George M.; Wu, Gary D.; Zeller, Georg; Zhao, Liping; Raes, Jeroen; Knight, Rob; Bork, Peer.

    In: Nature Microbiology, Vol. 3, No. 1, 2018, p. 8-16.

    Research output: Contribution to journalReviewResearchpeer-review

  11. 2017
  12. Published

    Complete Genome Sequences of emm111 Type Streptococcus pyogenes Strain GUR, with Antitumor Activity, and Its Derivative Strain GURSA1 with an Inactivated emm Gene. / Suvorova, Maria A; Tsapieva, Anna N; Bak, Emilie Glad; Chereshnev, Valery A; Kiseleva, Ekaterina P; Suvorov, Alexander N; Arumugam, Manimozhiyan.

    In: Genome Announcements, Vol. 5, No. 38, e00939-17, 21.09.2017.

    Research output: Contribution to journalJournal articleResearch

  13. Published

    Corrigendum : Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota. / Forslund, Kristoffer; Hildebrand, Falk; Nielsen, Trine; Falony, Gwen; Le Chatelier, Emmanuelle; Sunagawa, Shinichi; Prifti, Edi; Vieira-Silva, Sara; Gudmundsdottir, Valborg; Pedersen, Helle Krogh; Arumugam, Manimozhiyan; Kristiansen, Karsten; Voigt, Anita Yvonne; Vestergaard, Henrik; Hercog, Rajna; Costea, Paul Igor; Kultima, Jens Roat; Li, Junhua; Jørgensen, Torben; Levenez, Florence; Doré, Joel; Nielsen, H Bjørn; Brunak, Søren; Raes, Jeroen; Hansen, Torben; Wang, Jun; Ehrlich, S. Dusko; Bork, Peer; Pedersen, Oluf; MetaHIT consortium.

    In: Nature, Vol. 545, No. 116, 22318, 03.05.2017.

    Research output: Contribution to journalComment/debateResearch

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ID: 41056735