Chuna Ram Choudhary

Chuna Ram Choudhary

professor, group leader


  1. Published

    A PTIP-PA1 subcomplex promotes transcription for IgH class switching independently from the associated MLL3/MLL4 methyltransferase complex. / Starnes, Linda M; Su, Dan; Pikkupeura, Laura M; Weinert, Brian T; Santos, Margarida A; Mund, Andreas; Soria, Rebeca; Cho, Young-Wook; Pozdnyakova, Irina; Kubec Højfeldt, Martina; Lages Lino Vala, Andrea; Yang, Wenjing; López-Méndez, Blanca; Lee, Ji-Eun; Peng, Weiqun; Yuan, Joan; Ge, Kai; Montoya, Guillermo; Nussenzweig, André; Choudhary, Chuna Ram; Daniel, Jeremy A.

    In: Genes & Development, Vol. 30, No. 2, 15.01.2016, p. 149-163.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    A Proteome-wide, Quantitative Survey of In Vivo Ubiquitylation Sites Reveals Widespread Regulatory Roles. / Wagner, Sebastian Alexander; Beli, Petra; Weinert, Brian Tate; Nielsen, Michael Lund; Cox, Jürgen; Mann, Matthias; Choudhary, Chuna Ram.

    In: Molecular and Cellular Proteomics, Vol. 10, No. 10, 01.10.2011, p. M111.013284.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A new cellular stress response that triggers centriolar satellite reorganization and ciliogenesis. / Villumsen, Bine H; Danielsen, Jannie R; Povlsen, Lou; Sylvestersen, Kathrine B; Merdes, Andreas; Beli, Petra; Yang, Yun-Gui; Choudhary, Chuna Ram; Nielsen, Michael L; Mailand, Niels; Bekker-Jensen, Simon.

    In: E M B O Journal, Vol. 32, No. 23, 11.10.2013, p. 3029-3040.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    A phospho-proteomic screen identifies substrates of the checkpoint kinase Chk1. / Blasius, Melanie; Forment, Josep V; Thakkar, Neha; Wagner, Sebastian A; Choudhary, Chuna Ram; Jackson, Stephen P.

    In: Genome Biology (Online Edition), Vol. 12, No. 8, 2011, p. R78.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    A quantitative 14-3-3 interaction screen connects the nuclear exosome targeting complex to the DNA damage response. / Blasius, Melanie; Wagner, Sebastian A; Choudhary, Chuna Ram; Bartek, Jiri; Jackson, Stephen P.

    In: Genes & Development, Vol. 28, No. 18, 04.09.2014, p. 1977-1982.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Accurate quantification of site-specific acetylation stoichiometry reveals the impact of sirtuin deacetylase CobB on the E. coli acetylome. / Weinert, Brian Tate; Satpathy, Shankha; Hansen, Bogi Karbech; Lyon, David; Jensen, Lars Juhl; Choudhary, Chuna Ram.

    In: Molecular and Cellular Proteomics, Vol. 16, 05.2017, p. 759-769.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli. / Weinert, Brian T; Iesmantavicius, Vytautas; Wagner, Sebastian A; Schölz, Christian; Gummesson, Bertil; Beli, Petra; Nyström, Thomas; Choudhary, Chuna Ram.

    In: Molecular Cell, Vol. 51, No. 2, 25.07.2013, p. 265-272.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Acetylation dynamics and stoichiometry in Saccharomyces cerevisiae. / Weinert, Brian Tate; Iesmantavicius, Vytautas; Moustafa, Tarek; Schölz, Christian; Wagner, Sebastian A; Magnes, Christoph; Zechner, Rudolf; Choudhary, Chuna Ram.

    In: Molecular Systems Biology, Vol. 10, No. 1, 31.01.2014, p. 716.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Acetylation of intrinsically disordered regions regulates phase separation. / Saito, Makoto; Hess, Daniel; Eglinger, Jan; Fritsch, Anatol W; Kreysing, Moritz; Weinert, Brian T; Choudhary, Chunaram; Matthias, Patrick.

    In: Nature Chemical Biology, Vol. 15, No. 1, 01.2019, p. 51-61.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Acetylation site specificities of lysine deacetylase inhibitors in human cells. / Schölz, Christian; Weinert, Brian Tate; Wagner, Sebastian A; Beli, Petra; Miyake, Yasuyuki; Qi, Jun; Jensen, Lars J; Streicher, Werner; McCarthy, Anna R; Westwood, Nicholas J; Lain, Sonia; Cox, Jürgen; Matthias, Patrick; Mann, Matthias; Bradner, James E; Choudhary, Chuna Ram.

    In: Nature Biotechnology, Vol. 33, 2015, p. 415–423.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Analysis of acetylation stoichiometry suggests that SIRT3 repairs nonenzymatic acetylation lesions. / Weinert, Brian T; Moustafa, Tarek; Iesmantavicius, Vytautas; Zechner, Rudolf; Choudhary, Chuna Ram.

    In: E M B O Journal, Vol. 34, No. 21, 03.11.2015, p. 2620-2632.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Analysis of human acetylation stoichiometry defines mechanistic constraints on protein regulation. / Hansen, Bogi Karbech; Gupta, Rajat; Baldus, Linda; Lyon, David; Narita, Takeo; Lammers, Michael; Choudhary, Chunaram; Weinert, Brian T.

    In: Nature Communications, Vol. 10, 1055, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Avoiding abundance bias in the functional annotation of posttranslationally modified proteins. / Schölz, Christian; Lyon, David; Refsgaard, Jan C; Jensen, Lars Juhl; Choudhary, Chuna Ram; Weinert, Brian T.

    In: Nature Methods, Vol. 12, 11.2015, p. 1003-4.

    Research output: Contribution to journalComment/debateResearchpeer-review

  14. Published

    Convergence of Ubiquitylation and Phosphorylation Signaling in Rapamycin-Treated Yeast Cells. / Iesmantavicius, Vytautas; Weinert, Brian Tate; Choudhary, Chuna Ram.

    In: Molecular & Cellular Proteomics, Vol. 13, No. 8, 24.06.2014, p. 1979-92.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity. / Gupta, Rajat; Somyajit, Kumar; Narita, Takeo; Maskey, Elina; Stanlie, Andre; Kremer, Magdalena; Typas, Dimitris; Lammers, Michael; Mailand, Niels; Nussenzweig, Andre; Lukas, Jiri; Choudhary, Chunaram.

    In: Cell, Vol. 173, No. 4, 2018, p. 972-988.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    DVC1 (C1orf124) is a DNA damage-targeting p97 adaptor that promotes ubiquitin-dependent responses to replication blocks. / Mosbech, Anna; Gibbs-Seymour, Ian; Kagias, Konstantinos; Thorslund, Tina; Beli, Petra; Povlsen, Lou; Nielsen, Sofie Vincents; Smedegaard, Stine; Sedgwick, Garry; Lukas, Claudia; Hartmann-Petersen, Rasmus; Lukas, Jiri; Choudhary, Chuna Ram; Pocock, Roger David John; Bekker-Jensen, Simon; Mailand, Niels.

    In: Nature Structural and Molecular Biology, Vol. 19, No. 11, 2012, p. 1084-92.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Decoding signalling networks by mass spectrometry-based proteomics. / Choudhary, Chuna Ram; Mann, Matthias.

    In: Nature Reviews. Molecular Cell Biology, Vol. 11, No. 6, 01.06.2010, p. 427-39.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Deletion of APC7 or APC16 Allows Proliferation of Human Cells without the Spindle Assembly Checkpoint. / Wild, Thomas; Budzowska, Magda; Hellmuth, Susanne; Eibes, Susana; Karemore, Gopal; Barisic, Marin; Stemmann, Olaf; Choudhary, Chunaram.

    In: Cell Reports, Vol. 25, No. 9, 2317-2328.e5, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Deubiquitylating enzyme USP9x regulates hippo pathway activity by controlling angiomotin protein turnover. / Nguyen, Thanh Hung; Andrejeva, Diana; Gupta, Rajat; Choudhary, Chuna Ram; Hong, Xin; Eichhorn, Pieter JA ; Loya, Anand Chainsukh; Cohen, Stephen Michael.

    In: Cell Discovery, Vol. 2, 16001, 29.03.2016.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours. / Lasko, Loren M; Jakob, Clarissa G; Edalji, Rohinton P; Qiu, Wei; Montgomery, Debra; Digiammarino, Enrico L; Hansen, T Matt; Risi, Roberto M; Frey, Robin; Manaves, Vlasios; Shaw, Bailin; Algire, Mikkel; Hessler, Paul; Lam, Lloyd T; Uziel, Tamar; Faivre, Emily; Ferguson, Debra; Buchanan, Fritz G; Martin, Ruth L; Torrent, Maricel; Chiang, Gary G; Karukurichi, Kannan; Langston, J William; Weinert, Brian T; Choudhary, Chunaram; de Vries, Peter; Van Drie, John H; McElligott, David; Kesicki, Ed; Marmorstein, Ronen; Sun, Chaohong; Cole, Philip A; Rosenberg, Saul H; Michaelides, Michael R; Lai, Albert; Bromberg, Kenneth D.

    In: Nature, Vol. 550, No. 7674, 05.10.2017, p. 128-132.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Functions and mechanisms of non-histone protein acetylation. / Narita, Takeo; Weinert, Brian T; Choudhary, Chunaram.

    In: Nature Reviews. Molecular Cell Biology, Vol. 20, 2019, p. 156-174.

    Research output: Contribution to journalReviewResearchpeer-review

  22. Published

    Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage. / Thorslund, Tina; Ripplinger, Anita; Hoffmann, Saskia; Wild, Thomas; Uckelmann, Michael; Villumsen, Bine; Narita, Takeo; Sixma, Titia K; Choudhary, Chuna Ram; Bekker-Jensen, Simon; Mailand, Niels.

    In: Nature, Vol. 527, No. 7578, 19.11.2015, p. 389-93.

    Research output: Contribution to journalLetterResearchpeer-review

  23. Identification of a novel activating mutation (Y842C) within the activation loop of FLT3 in patients with acute myeloid leukemia (AML). / Kindler, Thomas; Breitenbuecher, Frank; Kasper, Stefan; Estey, Eli; Giles, Francis; Feldman, Eric; Ehninger, Gerhard; Schiller, Gary; Klimek, Virginia; Nimer, Stephen D; Gratwohl, Alois; Choudhary, Chuna Ram; Mueller-Tidow, Constan; Serve, Hubert; Gschaidmeier, Harald; Cohen, Pamela S; Huber, Christoph; Fischer, Thomas.

    In: Blood, Vol. 105, No. 1, 2005, p. 335-40.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Lysine acetylation targets protein complexes and co-regulates major cellular functions. / Choudhary, Chuna Ram; Kumar, Chanchal; Gnad, Florian; Nielsen, Michael L; Rehman, Michael; Walther, Tobias C; Olsen, Jesper V; Mann, Matthias.

    In: Science, Vol. 325, No. 5942, 2009, p. 834-40.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation. / Weinert, Brian T; Schölz, Christian; Wagner, Sebastian A; Iesmantavicius, Vytautas; Su, Dan; Daniel, Jeremy A; Choudhary, Chuna Ram.

    In: Cell Reports, Vol. 4, No. 4, 29.08.2013, p. 842-51.

    Research output: Contribution to journalJournal articleResearchpeer-review

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ID: 13781159