A genome-wide gene-environment interaction study of breast cancer risk for women of European ancestry

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  • Pooja Middha
  • Xiaoliang Wang
  • Sabine Behrens
  • Manjeet K. Bolla
  • Qin Wang
  • Joe Dennis
  • Kyriaki Michailidou
  • Thomas U. Ahearn
  • Irene L. Andrulis
  • Hoda Anton-Culver
  • Volker Arndt
  • Kristan J. Aronson
  • Paul L. Auer
  • Annelie Augustinsson
  • Thaïs Baert
  • Laura E.Beane Freeman
  • Heiko Becher
  • Matthias W. Beckmann
  • Javier Benitez
  • Bojesen, Stig Egil
  • Hiltrud Brauch
  • Hermann Brenner
  • Angela Brooks-Wilson
  • Daniele Campa
  • Federico Canzian
  • Angel Carracedo
  • Jose E. Castelao
  • Stephen J. Chanock
  • Georgia Chenevix-Trench
  • Emilie Cordina-Duverger
  • Fergus J. Couch
  • Angela Cox
  • Simon S. Cross
  • Kamila Czene
  • Laure Dossus
  • Pierre Antoine Dugué
  • A. Heather Eliassen
  • Mikael Eriksson
  • D. Gareth Evans
  • Peter A. Fasching
  • Jonine D. Figueroa
  • Olivia Fletcher
  • Henrik Flyger
  • Marike Gabrielson
  • Manuela Gago-Dominguez
  • Graham G. Giles
  • Anna González-Neira
  • Felix Grassmann
  • Sune F. Nielsen
  • Nordestgaard, Børge
  • CTS Consortium
  • ABCTB Investigators
  • kConFab Investigators

BACKGROUND: Genome-wide studies of gene-environment interactions (G×E) may identify variants associated with disease risk in conjunction with lifestyle/environmental exposures. We conducted a genome-wide G×E analysis of ~ 7.6 million common variants and seven lifestyle/environmental risk factors for breast cancer risk overall and for estrogen receptor positive (ER +) breast cancer. METHODS: Analyses were conducted using 72,285 breast cancer cases and 80,354 controls of European ancestry from the Breast Cancer Association Consortium. Gene-environment interactions were evaluated using standard unconditional logistic regression models and likelihood ratio tests for breast cancer risk overall and for ER + breast cancer. Bayesian False Discovery Probability was employed to assess the noteworthiness of each SNP-risk factor pairs. RESULTS: Assuming a 1 × 10-5 prior probability of a true association for each SNP-risk factor pairs and a Bayesian False Discovery Probability < 15%, we identified two independent SNP-risk factor pairs: rs80018847(9p13)-LINGO2 and adult height in association with overall breast cancer risk (ORint = 0.94, 95% CI 0.92-0.96), and rs4770552(13q12)-SPATA13 and age at menarche for ER + breast cancer risk (ORint = 0.91, 95% CI 0.88-0.94). CONCLUSIONS: Overall, the contribution of G×E interactions to the heritability of breast cancer is very small. At the population level, multiplicative G×E interactions do not make an important contribution to risk prediction in breast cancer.

Original languageEnglish
Article number93
JournalBreast cancer research : BCR
Volume25
Issue number1
Number of pages13
ISSN1465-5411
DOIs
Publication statusPublished - 2023

Bibliographical note

Publisher Copyright:
© 2023. BioMed Central Ltd., part of Springer Nature.

    Research areas

  • Breast cancer, European ancestry, Gene-environment interactions, Genetic epidemiology

ID: 362738798