Jakob Stokholm
Associate Professor
Food Microbiology, Gut Health, and Fermentation
Rolighedsvej 26
1958 Frederiksberg C
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25-hydroxyvitamin D and risk of atopic diseases and infections in early childhood
Brustad, N., Kim, M., Skov, F., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Allergy: European Journal of Allergy and Clinical Immunology. 78, 10, p. 2770-2773Research output: Contribution to journal › Comment/debate › Research › peer-review
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Associations of pre- and postnatal exposures with optic nerve status in young adults
Zhu, L., Munch, I. C., Pedersen, C. T., Stokholm, Jakob, Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Carlsson, C. J., Schoos, Ann-Marie Malby, Larsen, Michael, Bisgaard, H. & Brustad, N., 2023, In: Acta Ophthalmologica. 101, 7, p. 737-746 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Atopic and non-atopic effects of fish oil supplementation during pregnancy
Bisgaard, H., Mikkelsen, M., Rasmussen, Morten Arendt, Sevelsted, A., Schoos, Ann-Marie Malby, Brustad, N., Eliasen, A. U., Thorsen, J., Chawes, Bo Lund Krogsgaard, Gürdeniz, G., Morin, A., Stark, K., Stokholm, Jakob, Ober, C., Pedersen, C. E. T. & Bønnelykke, Klaus, 2023, In: Thorax. 78, 12, p. 1168–1174 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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COVID-19 lockdown, genetic ADHD susceptibility, and mental health in 10- year-old children
Hernández-lorca, M., Sevelsted, A., Jepsen, J. R. M., Pedersen, C. T., Rosenberg, J. B., Mohammadzadeh, P., Rasmussen, Morten Arendt, Sørensen, M. E., Bilenberg, N., Glenthøj, Birte Yding, Fagerlund, Birgitte, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Vinding, R. K., Ebdrup, Bjørn & Bønnelykke, Klaus, 2023, In: Psychiatry Research. 329, 9 p., 115481.Research output: Contribution to journal › Journal article › Research › peer-review
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Can breastfeeding promote an antibiotic-resilient microbiome?
Stokholm, Jakob & Thorsen, Jonathan Jan Ilve, 2023, In: Med. 4, 2, p. 67-68 2 p.Research output: Contribution to journal › Comment/debate › Research
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Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice
Zachariassen, L. F., Ebert, M. B. B., Mentzel, Caroline M. Junker, Deng, Ling, Krych, Lukasz, Nielsen, Dennis Sandris, Stokholm, Jakob & Hansen, Camilla Hartmann Friis, 2023, In: Gut Microbes. 15, 2, 15 p., 2271151.Research output: Contribution to journal › Journal article › Research › peer-review
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Diet-associated vertically transferred metabolites and risk of asthma, allergy, eczema, and infections in early childhood
Brustad, N., Olarini, A., Kim, M., Chen, L., Ali, M., Wang, T., Cohen, A. S., Ernst, M., Hougaard, D., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus, Lasky-Su, J., Rasmussen, Morten Arendt & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 2, 8 p., e13917.Research output: Contribution to journal › Journal article › Research › peer-review
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Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults
Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.Research output: Contribution to journal › Journal article › Research › peer-review
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Exhaled nitric oxide is only an asthma-relevant biomarker among children with allergic sensitization
Sunde, R. B., Thorsen, J., Skov, F., Hesselberg, L., Kyvsgaard, J., Følsgaard, N. V., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 11, 12 p., e14044.Research output: Contribution to journal › Journal article › Research › peer-review
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Expanding known viral diversity in the healthy infant gut
Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, , 2023, In: Nature Microbiology. 8, p. 986–998Research output: Contribution to journal › Journal article › Research › peer-review
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Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases
Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Gut microbiota maturity mediates the protective effect of siblings on food allergy
Gao, Y., Stokholm, Jakob, O'Hely, M., Ponsonby, A. L., Tang, M. L. K., Ranganathan, S., Saffery, R., Harrison, L. C., Collier, F., Gray, L., Burgner, D., Molloy, J., Sly, P. D., Brix, S., Frøkiær, Hanne, Vuillermin, P. & BIS Investigator Group, B. I. G., 2023, In: Journal of Allergy and Clinical Immunology. 152, 3, p. 667-675 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Handgrip strength associates with effort-dependent lung function measures among adolescents with and without asthma
Hesselberg, L. M., Kyvsgaard, J. N., Stokholm, Jakob, Bisgaard, H., Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Scientific Reports. 13, 9 p., 13044.Research output: Contribution to journal › Journal article › Research › peer-review
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Limited clinical role of blood eosinophil levels in early life atopic disease: A mother–child cohort study
Jensen, S. K., Melgaard, M. E., Pedersen, C. E. T., Yang, L., Vahman, N., Thyssen, Jacob Pontoppidan, Schoos, Ann-Marie Malby, Stokholm, Jakob, Bisgaard, H., Chawes, Bo Lund Krogsgaard & Bønnelykke, Klaus, 2023, In: Pediatric Allergy and Immunology. 34, 11, 10 p., e14050.Research output: Contribution to journal › Journal article › Research › peer-review
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Machine-learning analysis of cross-study samples according to the gut microbiome in 12 infant cohorts
Vänni, P., Tejesvi, M. V., Paalanne, N., Aagaard, K., Ackermann, G., Camargo, C. A., Eggesbø, M., Hasegawa, K., Hoen, A. G., Karagas, M. R., Kolho, K., Laursen, M. F., Ludvigsson, J., Madan, J., Ownby, D., Stanton, C., Stokholm, Jakob & Tapiainen, T., 2023, In: mSystems. 8, 6, 20 p., e0036423.Research output: Contribution to journal › Journal article › Research › peer-review
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Maternal vitamin D–related metabolome and offspring risk of asthma outcomes
Kim, M., Brustad, N., Ali, M., Gürdeniz, G., Rasmussen, Morten Arendt, Litonjua, A. A., Wheelock, C. E., Kelly, R. S., Chen, Y., Prince, N., Guo, F., Zhou, X., Stokholm, Jakob, Bønnelykke, Klaus, Weiss, S. T., Bisgaard, H., Lasky-Su, J. & Chawes, Bo Lund Krogsgaard, 2023, In: Journal of Allergy and Clinical Immunology. 152, 6, p. 1646-1657.e11 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Middle ear effusion, ventilation tubes and neurological development in childhood
Thorsen, Jonathan Jan Ilve, Pedersen, T. M., Cecilie Mora-Jensen, A. R., Bjarnadó ttir, E., Bager, S. C., Bisgaard, H. & Stokholm, Jakob, 2023, In: PLoS ONE. 18, 1, 14 p., e0280199.Research output: Contribution to journal › Journal article › Research › peer-review
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Novel Connections of Common Childhood Illnesses Based on More Than 5 Million Diary Registrations From Birth Till Age 3 Years
Nørgaard, S. K., Følsgaard, N., Vissing, N. H., Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Smilde, Age Klaas, Bønnelykke, Klaus, Bisgaard, H. & Rasmussen, Morten Arendt, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 7, p. 2162-2171.e6 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Oropharyngeal Microbiota Clusters in Children with Asthma or Wheeze Associate with Allergy, Blood Transcriptomic Immune Pathways, and Exacerbation Risk
U-BIOPRED Study Group, U. S. G., 2023, In: American Journal of Respiratory and Critical Care Medicine. 208, 2, p. 142-154 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Prenatal exposure to ambient air pollution is associated with early life immune perturbations
Tingskov Pedersen, C., Eliasen, A. U., Ketzel, M., Brandt, J., Loft, Steffen, Frohn, L. M., Khan, J., Brix, Susanne, Rasmussen, Morten Arendt, Stokholm, Jakob, Morin, A., Ober, C., Bisgaard, H., Pedersen, Marie & Bønnelykke, Klaus, 2023, In: The Journal of allergy and clinical immunology. 151, 1, p. 212-221 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Risk Factors and Age-Related Patterns of Asthma-Like Symptoms in Early Childhood
Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Horner, David Lyle George, Hesselberg, L. M., Melgaard, M. E., Jensen, S. K., Schoos, Ann-Marie Malby, Thorsen, Jonathan Jan Ilve, Pedersen, C. E. T., Brustad, N., Bønnelykke, Klaus, Bisgaard, H. & Stokholm, Jakob, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 6, p. 1773-1784.e10 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Supplementation With Fish Oil in Pregnancy Reduces Gastroenteritis in Early Childhood
Horner, David Lyle George, Hjelmsø, M. H., Thorsen, J., Rasmussen, Morten Arendt, Eliasen, A., Vinding, R. K., Schoos, Ann-Marie Malby, Brustad, N., Sunde, R. B., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob & Bisgaard, H., 2023, In: Journal of Infectious Diseases. 227, 3, p. 448–456 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria
Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.Research output: Contribution to journal › Journal article › Research › peer-review
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The infant gut virome is associated with preschool asthma risk independently of bacteria
Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 252282561
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410
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Maturation of the gut microbiome and risk of asthma in childhood
Research output: Contribution to journal › Journal article › Research › peer-review
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391
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
Research output: Contribution to journal › Journal article › Research › peer-review
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276
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published