Jakob Stokholm
Associate Professor
Food Microbiology, Gut Health, and Fermentation
Rolighedsvej 26
1958 Frederiksberg C
- 2024
- Published
Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages
Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial colonisation of the airway in neonates and risk of asthma and allergy until age 18 years
Sunde, R. B., Thorsen, J., Kim, M., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2024, In: The European respiratory journal. 63, 1, 15 p., 2300471.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fish oil supplementation during pregnancy, anthropometrics, and metabolic health at age ten: A randomized clinical trial
Vinding, R. K., Sevelsted, A., Horner, D., Vahman, N., Lauritzen, Lotte, Hagen, C. P., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob & Bønnelykke, Klaus, 2024, In: American Journal of Clinical Nutrition. 119, 4, p. 960-968Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-dose vitamin D3 supplementation in pregnancy and risk of neurodevelopmental disorders in the children at age 10: A randomized clinical trial
Aagaard, K., Jepsen, J. R. M., Sevelsted, A., Horner, D., Vinding, R., Rosenberg, J. B., Brustad, N., Eliasen, A., Mohammadzadeh, P., Følsgaard, N., Hernández-lorca, M., Fagerlund, Birgitte, Glenthøj, Birte Yding, Rasmussen, Morten Arendt, Bilenberg, N., Stokholm, Jakob, Bønnelykke, Klaus, Ebdrup, Bjørn & Chawes, Bo Lund Krogsgaard, 2024, In: The American Journal of Clinical Nutrition. 119, 2, p. 362-370 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Key risk factors of asthma-like symptoms are mediated through infection burden in early childhood
Kyvsgaard, J. N., Brustad, N., Hesselberg, L. M., Vahman, N., Thorsen, J., Schoos, A. M. M., Bønnelykke, K., Stokholm, Jakob & Chawes, B. L., 2024, In: Journal of Allergy and Clinical Immunology. 153, 3, p. 684-694 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal Diet Associates with Offspring Bone Mineralization, Fracture Risk and Enamel Defects in Childhood and Influences the Prenatal Effect of High-Dose Vitamin D Supplementation
Kim, M., Nørrisgaard, P. E., Vahman, N., Cexus, O. N. F., Townsend, P. A., Stokholm, Jakob, Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard & Brustad, N., 2024, In: Nutrients. 16, 3, 16 p., 405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal inflammation during pregnancy is associated with risk of ADHD in children at age 10
Rosenberg, J. B., Richardt Møllegaard Jepsen, J., Mohammadzadeh, P., Sevelsted, A., Vinding, R., Sørensen, M. E., Horner, David Lyle George, Aagaard, K., Fagerlund, Birgitte, Brix, Susanne, Følsgaard, N., Schoos, Ann-Marie Malby, Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Pantelis, C., Dalsgaard, Søren, Glenthøj, Birte Yding, Bilenberg, N., Bønnelykke, Klaus & Ebdrup, Bjørn, 2024, In: Brain, Behavior, and Immunity. 115, p. 450-457 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
25-hydroxyvitamin D and risk of atopic diseases and infections in early childhood
Brustad, N., Kim, M., Skov, F., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Allergy: European Journal of Allergy and Clinical Immunology. 78, 10, p. 2770-2773Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Associations of pre- and postnatal exposures with optic nerve status in young adults
Zhu, L., Munch, I. C., Pedersen, C. T., Stokholm, Jakob, Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Carlsson, C. J., Schoos, Ann-Marie Malby, Larsen, Michael, Bisgaard, H. & Brustad, N., 2023, In: Acta Ophthalmologica. 101, 7, p. 737-746 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Atopic and non-atopic effects of fish oil supplementation during pregnancy
Bisgaard, H., Mikkelsen, M., Rasmussen, Morten Arendt, Sevelsted, A., Schoos, Ann-Marie Malby, Brustad, N., Eliasen, A. U., Thorsen, J., Chawes, Bo Lund Krogsgaard, Gürdeniz, G., Morin, A., Stark, K., Stokholm, Jakob, Ober, C., Pedersen, C. E. T. & Bønnelykke, Klaus, 2023, In: Thorax. 78, 12, p. 1168–1174 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
COVID-19 lockdown, genetic ADHD susceptibility, and mental health in 10- year-old children
Hernández-lorca, M., Sevelsted, A., Jepsen, J. R. M., Pedersen, C. T., Rosenberg, J. B., Mohammadzadeh, P., Rasmussen, Morten Arendt, Sørensen, M. E., Bilenberg, N., Glenthøj, Birte Yding, Fagerlund, Birgitte, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Vinding, R. K., Ebdrup, Bjørn & Bønnelykke, Klaus, 2023, In: Psychiatry Research. 329, 9 p., 115481.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Can breastfeeding promote an antibiotic-resilient microbiome?
Stokholm, Jakob & Thorsen, Jonathan Jan Ilve, 2023, In: Med. 4, 2, p. 67-68 2 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice
Zachariassen, L. F., Ebert, M. B. B., Mentzel, Caroline M. Junker, Deng, Ling, Krych, Lukasz, Nielsen, Dennis Sandris, Stokholm, Jakob & Hansen, Camilla Hartmann Friis, 2023, In: Gut Microbes. 15, 2, 15 p., 2271151.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diet-associated vertically transferred metabolites and risk of asthma, allergy, eczema, and infections in early childhood
Brustad, N., Olarini, A., Kim, M., Chen, L., Ali, M., Wang, T., Cohen, A. S., Ernst, M., Hougaard, D., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus, Lasky-Su, J., Rasmussen, Morten Arendt & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 2, 8 p., e13917.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults
Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exhaled nitric oxide is only an asthma-relevant biomarker among children with allergic sensitization
Sunde, R. B., Thorsen, J., Skov, F., Hesselberg, L., Kyvsgaard, J., Følsgaard, N. V., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Pediatric Allergy and Immunology. 34, 11, 12 p., e14044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expanding known viral diversity in the healthy infant gut
Shah, S. A., Deng, L., Thorsen, J., Pedersen, A. G., Dion, M. B., Castro-Mejía, J. L., Silins, R., Romme, F. O., Sausset, R., Jessen, L. E., Ndela, E. O., Hjelmsø, M., Rasmussen, M. A., Redgwell, T. A., Rodríguez, C. L., Vestergaard, G., Zhang, Y., Chawes, B., Bønnelykke, K., Sørensen, S. J. & 6 others, , 2023, In: Nature Microbiology. 8, p. 986–998Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases
Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota maturity mediates the protective effect of siblings on food allergy
Gao, Y., Stokholm, Jakob, O'Hely, M., Ponsonby, A. L., Tang, M. L. K., Ranganathan, S., Saffery, R., Harrison, L. C., Collier, F., Gray, L., Burgner, D., Molloy, J., Sly, P. D., Brix, S., Frøkiær, Hanne, Vuillermin, P. & BIS Investigator Group, B. I. G., 2023, In: Journal of Allergy and Clinical Immunology. 152, 3, p. 667-675 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Handgrip strength associates with effort-dependent lung function measures among adolescents with and without asthma
Hesselberg, L. M., Kyvsgaard, J. N., Stokholm, Jakob, Bisgaard, H., Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Scientific Reports. 13, 9 p., 13044.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Limited clinical role of blood eosinophil levels in early life atopic disease: A mother–child cohort study
Jensen, S. K., Melgaard, M. E., Pedersen, C. E. T., Yang, L., Vahman, N., Thyssen, Jacob Pontoppidan, Schoos, Ann-Marie Malby, Stokholm, Jakob, Bisgaard, H., Chawes, Bo Lund Krogsgaard & Bønnelykke, Klaus, 2023, In: Pediatric Allergy and Immunology. 34, 11, 10 p., e14050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Machine-learning analysis of cross-study samples according to the gut microbiome in 12 infant cohorts
Vänni, P., Tejesvi, M. V., Paalanne, N., Aagaard, K., Ackermann, G., Camargo, C. A., Eggesbø, M., Hasegawa, K., Hoen, A. G., Karagas, M. R., Kolho, K., Laursen, M. F., Ludvigsson, J., Madan, J., Ownby, D., Stanton, C., Stokholm, Jakob & Tapiainen, T., 2023, In: mSystems. 8, 6, 20 p., e0036423.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal vitamin D–related metabolome and offspring risk of asthma outcomes
Kim, M., Brustad, N., Ali, M., Gürdeniz, G., Rasmussen, Morten Arendt, Litonjua, A. A., Wheelock, C. E., Kelly, R. S., Chen, Y., Prince, N., Guo, F., Zhou, X., Stokholm, Jakob, Bønnelykke, Klaus, Weiss, S. T., Bisgaard, H., Lasky-Su, J. & Chawes, Bo Lund Krogsgaard, 2023, In: Journal of Allergy and Clinical Immunology. 152, 6, p. 1646-1657.e11 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Middle ear effusion, ventilation tubes and neurological development in childhood
Thorsen, Jonathan Jan Ilve, Pedersen, T. M., Cecilie Mora-Jensen, A. R., Bjarnadó ttir, E., Bager, S. C., Bisgaard, H. & Stokholm, Jakob, 2023, In: PLoS ONE. 18, 1, 14 p., e0280199.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel Connections of Common Childhood Illnesses Based on More Than 5 Million Diary Registrations From Birth Till Age 3 Years
Nørgaard, S. K., Følsgaard, N., Vissing, N. H., Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Smilde, Age Klaas, Bønnelykke, Klaus, Bisgaard, H. & Rasmussen, Morten Arendt, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 7, p. 2162-2171.e6 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 252282561
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Maturation of the gut microbiome and risk of asthma in childhood
Research output: Contribution to journal › Journal article › Research › peer-review
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391
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
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276
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published