Jakob Stokholm
Associate Professor
Food Microbiology, Gut Health, and Fermentation
Rolighedsvej 26
1958 Frederiksberg C
- Published
Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages
Mathieu, A., Dion, M., Deng, Ling, Tremblay, D., Moncaut, E., Shah, S. A., Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Bisgaard, H., Nielsen, Dennis Sandris, Moineau, S. & Petit, M., 2020, In: Nature Communications. 11, 12 p., 378.Research output: Contribution to journal › Journal article › Research › peer-review
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Vaginal seeding or vaginal microbial transfer from the mother to the caesarean-born neonate: a commentary regarding clinical management
Haahr, T., Glavind, J., Axelsson, P., Bistrup Fischer, M., Bjurström, J., Andrésdóttir, G., Teilmann-Jørgensen, D., Bonde, U., Olsén Sørensen, N., Møller, M., Fuglsang, J., Ovesen, P. G., Petersen, J. P., Stokholm, Jakob & Clausen, Tine Dalsgaard, Apr 2018, In: BJOG: An International Journal of Obstetrics and Gynaecology. 125, 5, p. 533-536Research output: Contribution to journal › Journal article › Research › peer-review
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Vaginal dysbiosis in pregnancy associates with risk of emergency caesarean section: a prospective cohort study
Haahr, T., Clausen, Tine Dalsgaard, Thorsen, J., Rasmussen, Morten Arendt, Mortensen, M. S., Lehtimäki, J., Shah, S. A., Hjelmsø, M. H., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Vestergaard, G., Jacobsson, B., Larsson, P., Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2022, In: Clinical Microbiology and Infection. 28, 4, p. Pages 588-595Research output: Contribution to journal › Journal article › Research › peer-review
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Urbanized microbiota in infants, immune constitution and later risk of atopic diseases
Lehtimäki, J., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Hjelmsø, M., Shah, S., Mortensen, M. S., Trivedi, Urvish, Vestergaard, G., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2021, In: Journal of Allergy and Clinical Immunology. 148, 1, p. 234-243 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Time trends of chronic immune diseases by year of birth in Danish registries
Sevelsted, A., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2021, In: European Journal of Epidemiology. 36, 11, p. 1179-1185 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The role of the 17q21 genotype in the prevention of early childhood asthma and recurrent wheeze by vitamin D
Kelly, R. S., Chawes, Bo Lund Krogsgaard, Guo, F., Zhang, L., Blighe, K., Litonjua, A. A., Raby, B. A., Levy, B. D., Rago, D., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H., Zhou, X., Lasky-Su, J. A. & Weiss, S. T., 2019, In: The European Respiratory Journal. 54, 4, 11 p., 1900761.Research output: Contribution to journal › Journal article › Research › peer-review
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The power and potential of BIOMAP to elucidate host-microbiome interplay in skin inflammatory diseases
Alenius, H., Sinkko, H., Moitinho-Silva, L., Rodriguez, E., Broderick, C., Alexander, H., Reiger, M., Hjelmsø, M. H., Fyhrquist, N., Olah, P., Bryce, P., Smith, C., Koning, F., Eyerich, K., Greco, D., van den Bogaard, E. H., Neumann, A. U., Traidl-Hoffmann, C., Homey, B., Flohr, C. & 3 others, , 2021, In: Experimental Dermatology. 30, 10, p. 1517-1531Research output: Contribution to journal › Review › Research › peer-review
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The maternal gut microbiome during pregnancy and offspring allergy and asthma
Gao, Y., Nanan, R., Macia, L., Tan, J., Sominsky, L., Quinn, T. P., O'Hely, M., Ponsonby, A., Tang, M. L. K., Collier, F., Strickland, D. H., Dhar, P., Brix, S., Phipps, S., Sly, P. D., Ranganathan, S., Stokholm, Jakob, Kristiansen, Karsten, Gray, L. E. K. & Vuillermin, P., 2021, In: Journal of Allergy and Clinical Immunology. 148, 3, p. 669-678Research output: Contribution to journal › Journal article › Research › peer-review
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The infant gut virome is associated with preschool asthma risk independently of bacteria
Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial composition
Li, Xuan Ji, Stokholm, Jakob, Brejnrod, A., Vestergaard, G. A., Russel, J., Trivedi, Urvish, Thorsen, Jonathan Jan Ilve, Gupta, S., Hjelmsø, M. H., Shah, S. A., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: Cell Host & Microbe. 29, 6, p. 975–987.e4 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 252282561
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Maturation of the gut microbiome and risk of asthma in childhood
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
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276
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published