Jakob Stokholm
Associate Professor
Food Microbiology, Gut Health, and Fermentation
Rolighedsvej 26
1958 Frederiksberg C
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25-hydroxyvitamin D and risk of atopic diseases and infections in early childhood
Brustad, N., Kim, M., Skov, F., Schoos, Ann-Marie Malby, Stokholm, Jakob, Bønnelykke, Klaus & Chawes, Bo Lund Krogsgaard, 2023, In: Allergy: European Journal of Allergy and Clinical Immunology. 78, 10, p. 2770-2773Research output: Contribution to journal › Comment/debate › Research › peer-review
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CDHR3 gene variation and childhood bronchiolitis
Husby, A., Pasanen, A., Waage, J., Sevelsted, A., Hodemaekers, H., Janssen, R., Karjalainen, M. K., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Korppi, M., Wennergren, G., Heinzmann, A., Bont, L., Bisgaard, H. & Bønnelykke, Klaus, Nov 2017, In: The Journal of allergy and clinical immunology. 140, 5, p. 1469-1471.e7Research output: Contribution to journal › Letter › Research › peer-review
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Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages
Dion, M. B., Shah, S. A., Deng, Ling, Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Horvath, P., Allard, A., Nielsen, Dennis Sandris, Petit, M. A. & Moineau, S., 2024, In: The ISME Journal. 18, 1, 9 p., wrae005.Research output: Contribution to journal › Journal article › Research › peer-review
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FUT2–ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses
Ahluwalia, T. S., Eliasen, A. U., Sevelsted, A., Pedersen, C-E. T., Stokholm, J., Chawes, B., Bork-Jensen, J., Grarup, N., Pedersen, O., Hansen, T., Linneberg, A., Sharma, A., Weiss, S. T., Evans, M. D., Jackson, D. J., Morin, A., Krogfelt, K. A., Schjørring, S., Mortensen, P. B., Hougaard, D. M. & 13 others, , 2020, In: Nature Communications. 11, 12 p., 6398.Research output: Contribution to journal › Journal article › Research › peer-review
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A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples
Deng, Ling, Silins, R., Castro-Mejia, J. L., Kot, W., Jessen, L., Thorsen, J., Shah, S., Stokholm, Jakob, Bisgaard, H., Moineau, S. & Nielsen, Dennis Sandris, 2019, In: Viruses. 11, 7, 10 p., 667.Research output: Contribution to journal › Journal article › Research › peer-review
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A genome-wide association study of total child psychiatric problems scores
Neumann, A., Nolte, I. M., Pappa, I., Ahluwalia, T. S., Pettersson, E., Rodriguez, A., Whitehouse, A., van Beijsterveldt, C. E. M., Benyamin, B., Hammerschlag, A. R., Helmer, Q., Karhunen, V., Krapohl, E., Lu, Y., van der Most, P. J., Palviainen, T., Pourcain, B. S., Seppälä, I., Suarez, A., Vilor-Tejedor, N. & 41 others, , 2022, In: PLoS ONE. 17, 8, 23 p., e0273116.Research output: Contribution to journal › Journal article › Research › peer-review
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A novel common variant in DCST2 is associated with length in early life and height in adulthood
van der Valk, R. J. P., Kreiner-Møller, E., Kooijman, M. N., Guxens, M., Stergiakouli, E., Sääf, A., Bradfield, J. P., Geller, F., Hayes, M. G., Cousminer, D. L., Körner, A., Thiering, E., Curtin, J. A., Myhre, R., Huikari, V., Joro, R., Kerkhof, M., Warrington, N. M., Pitkänen, N., Ntalla, I. & 31 others, , 15 Feb 2015, In: Human Molecular Genetics. 24, 4, p. 1155-68 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Airway immune mediator levels during asthma-like symptoms in young children and their possible role in response to azithromycin
Carlsson, C. J., Rasmussen, Morten Arendt, Pedersen, S. B., Wang, N., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus & Bisgaard, H., 2021, In: Allergy: European Journal of Allergy and Clinical Immunology. 76, 6, p. 1754-1764 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Airway obstruction and bronchial reactivity from age 1 month until 13 years in children with asthma: A prospective birth cohort study
Hallas, H. W., Chawes, Bo Lund Krogsgaard, Rasmussen, Morten Arendt, Arianto, L., Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2019, In: PLoS Medicine. 16, 1, 20 p., e1002722.Research output: Contribution to journal › Journal article › Research › peer-review
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Allergen Specificity in Specific IgE Cutoff
Schoos, A. M. M., Hansen, S. M., Skov, F. R., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2020, In: JAMA Pediatrics. 174, 10, p. 993-995Research output: Contribution to journal › Letter › Research › peer-review
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Allergic sensitization at school age is a systemic low-grade inflammatory disorder
Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Schoos, Ann-Marie Malby, Fink, N. R., Brix, S. & Bisgaard, H., Jul 2017, In: Allergy: European Journal of Allergy and Clinical Immunology. 72, 7, p. 1073-1080 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Altered Response to A(H1N1)pnd09 Vaccination in Pregnant Women: A Single Blinded Randomized Controlled Trial
Bischoff, A. L., Følsgaard, N. V., Carson, C. G., Stokholm, Jakob, Pedersen, L., Holmberg, M., Bisgaard, A., Birch, S., Tsai, T. F. & Bisgaard, H., 2013, In: P L o S One. 8, 4, 10 p., e56700.Research output: Contribution to journal › Journal article › Research › peer-review
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Amplicon sequencing provides more accurate microbiome information in healthy children compared to culturing
Gupta, S., Mortensen, M. S., Schjørring, S., Trivedi, Urvish, Vestergaard, G., Stokholm, Jakob, Bisgaard, H., Krogfelt, K. A. & Sørensen, Søren Johannes, 2019, In: Communications Biology. 2, p. 1-7 7 p., 291.Research output: Contribution to journal › Journal article › Research › peer-review
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Antibiotic exposure in infancy and development of BMI and body composition in childhood
Sejersen, T. S., Vinding, R. K., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Krakauer, M. & Bisgaard, H., 2019, In: EClinicalMedicine. 17, 7 p., 100209.Research output: Contribution to journal › Journal article › Research › peer-review
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Antibiotic use during pregnancy alters the commensal vaginal microbiota
Stokholm, Jakob, Schjørring, S., Eskildsen, C. E. A., Pedersen, L., Bischoff, A. L., Følsgaard, N., Carson, C. G., Chawes, B. L. K., Bønnelykke, K., Mølgaard, A., Jacobsson, B., Krogfelt, K. A. & Bisgaard, H., 2014, In: Clinical Microbiology and Infection. 20, 7, p. 629-635 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Antibiotics in Pregnancy Increase Children's Risk of Otitis Media and Ventilation Tubes
Pedersen, T. M., Stokholm, Jakob, Thorsen, Jonathan Jan Ilve, Mora-Jensen, A. C. & Bisgaard, H., Apr 2017, In: The Journal of Pediatrics. 183, p. 153-158.e1Research output: Contribution to journal › Journal article › Research › peer-review
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Association between childhood asthma and attention deficit hyperactivity or autism spectrum disorders: A systematic review with meta-analysis
Kaas, T. H., Vinding, R. K., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2021, In: Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology. 51, 2, p. 228-252 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Association of High-Dose Vitamin D Supplementation During Pregnancy With the Risk of Enamel Defects in Offspring: A 6-Year Follow-up of a Randomized Clinical Trial
Nørrisgaard, P. E., Haubek, D., Kühnisch, J., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 5 Aug 2019, In: JAMA Pediatrics. 173, 10, p. 924-930 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Association of bacteria and viruses with wheezy episodes in young children: prospective birth cohort study
Bisgaard, H., Hermansen, M. N., Bønnelykke, Klaus, Stokholm, Jakob, Baty, F., Skytt, N. L., Aniscenko, J., Kebadze, T. & Johnston, S. L., 2010, In: B M J. 341, 6 p., c4978.Research output: Contribution to journal › Journal article › Research › peer-review
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Associations of 25 Hydroxyvitamin D and High Sensitivity C-reactive Protein Levels in Early Life
Brustad, N., Fink, N. R., Stokholm, Jakob, Bønnelykke, Klaus, Følsgaard, N. V., Hougaard, D., Brix, S., Lasky-Su, J., Weiss, S. T. & Chawes, Bo Lund Krogsgaard, 2022, In: Nutrients. 14, 1, 9 p., 15.Research output: Contribution to journal › Journal article › Research › peer-review
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Associations of pre- and postnatal exposures with optic nerve status in young adults
Zhu, L., Munch, I. C., Pedersen, C. T., Stokholm, Jakob, Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Carlsson, C. J., Schoos, Ann-Marie Malby, Larsen, Michael, Bisgaard, H. & Brustad, N., 2023, In: Acta Ophthalmologica. 101, 7, p. 737-746 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Asthma and Wheeze Severity and the Oropharyngeal Microbiota in Children and Adolescents
Thorsen, J., Stokholm, J., Rasmussen, M. A., Roggenbuck-Wedemeyer, M., Vissing, N. H., Mortensen, M. S., Brejnrod, A. D., Fleming, L., Bush, A., Roberts, G., Singer, F., Frey, U., Hedlin, G., Nordlund, B., Murray, C. S., Abdel-Aziz, M. I., Hashimoto, S., van Aalderen, W., Maitland-van der Zee, A. H., Shaw, D. & 13 others, , 2022, In: Annals of the American Thoracic Society. 19, 12, p. 2031-2043 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Asthma-like symptoms in young children increase the risk of COPD
Bisgaard, H., Nørgaard, S., Sevelsted, A., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Mortensen, Erik Lykke, Ulrik, Charlotte Suppli & Bønnelykke, Klaus, 2021, In: Journal of Allergy and Clinical Immunology. 147, 2, p. 569-576 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Atopic and non-atopic effects of fish oil supplementation during pregnancy
Bisgaard, H., Mikkelsen, M., Rasmussen, Morten Arendt, Sevelsted, A., Schoos, Ann-Marie Malby, Brustad, N., Eliasen, A. U., Thorsen, J., Chawes, Bo Lund Krogsgaard, Gürdeniz, G., Morin, A., Stark, K., Stokholm, Jakob, Ober, C., Pedersen, C. E. T. & Bønnelykke, Klaus, 2023, In: Thorax. 78, 12, p. 1168–1174 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Azithromycin and high-dose vitamin D for treatment and prevention of asthma-like episodes in hospitalised preschool children: Study protocol for a combined double-blind randomised controlled trial
Kyvsgaard, J. N., Ralfkiaer, U., Følsgaard, N., Jensen, T. M., Hesselberg, L. M., Schoos, A. M., Bønnelykke, Klaus, Bisgaard, H., Stokholm, Jakob & Chawes, Bo Lund Krogsgaard, 2022, In: BMJ Open. 12, 4, 11 p., e054762.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 252282561
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Maturation of the gut microbiome and risk of asthma in childhood
Research output: Contribution to journal › Journal article › Research › peer-review
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391
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
Research output: Contribution to journal › Journal article › Research › peer-review
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276
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published