Jakob Stokholm

Jakob Stokholm

Associate Professor


  1. Published

    Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages

    Mathieu, A., Dion, M., Deng, Ling, Tremblay, D., Moncaut, E., Shah, S. A., Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Bisgaard, H., Nielsen, Dennis Sandris, Moineau, S. & Petit, M., 2020, In: Nature Communications. 11, 12 p., 378.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Vaginal seeding or vaginal microbial transfer from the mother to the caesarean-born neonate: a commentary regarding clinical management

    Haahr, T., Glavind, J., Axelsson, P., Bistrup Fischer, M., Bjurström, J., Andrésdóttir, G., Teilmann-Jørgensen, D., Bonde, U., Olsén Sørensen, N., Møller, M., Fuglsang, J., Ovesen, P. G., Petersen, J. P., Stokholm, Jakob & Clausen, Tine Dalsgaard, Apr 2018, In: BJOG: An International Journal of Obstetrics and Gynaecology. 125, 5, p. 533-536

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Vaginal dysbiosis in pregnancy associates with risk of emergency caesarean section: a prospective cohort study

    Haahr, T., Clausen, Tine Dalsgaard, Thorsen, J., Rasmussen, Morten Arendt, Mortensen, M. S., Lehtimäki, J., Shah, S. A., Hjelmsø, M. H., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Vestergaard, G., Jacobsson, B., Larsson, P., Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2022, In: Clinical Microbiology and Infection. 28, 4, p. Pages 588-595

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Urbanized microbiota in infants, immune constitution and later risk of atopic diseases

    Lehtimäki, J., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Hjelmsø, M., Shah, S., Mortensen, M. S., Trivedi, Urvish, Vestergaard, G., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2021, In: Journal of Allergy and Clinical Immunology. 148, 1, p. 234-243 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Time trends of chronic immune diseases by year of birth in Danish registries

    Sevelsted, A., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2021, In: European Journal of Epidemiology. 36, 11, p. 1179-1185 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    The role of the 17q21 genotype in the prevention of early childhood asthma and recurrent wheeze by vitamin D

    Kelly, R. S., Chawes, Bo Lund Krogsgaard, Guo, F., Zhang, L., Blighe, K., Litonjua, A. A., Raby, B. A., Levy, B. D., Rago, D., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H., Zhou, X., Lasky-Su, J. A. & Weiss, S. T., 2019, In: The European Respiratory Journal. 54, 4, 11 p., 1900761.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    The power and potential of BIOMAP to elucidate host-microbiome interplay in skin inflammatory diseases

    Alenius, H., Sinkko, H., Moitinho-Silva, L., Rodriguez, E., Broderick, C., Alexander, H., Reiger, M., Hjelmsø, M. H., Fyhrquist, N., Olah, P., Bryce, P., Smith, C., Koning, F., Eyerich, K., Greco, D., van den Bogaard, E. H., Neumann, A. U., Traidl-Hoffmann, C., Homey, B., Flohr, C. & 3 others, Bønnelykke, Klaus, Stokholm, Jakob & Weidinger, S., 2021, In: Experimental Dermatology. 30, 10, p. 1517-1531

    Research output: Contribution to journalReviewResearchpeer-review

  8. Published

    The maternal gut microbiome during pregnancy and offspring allergy and asthma

    Gao, Y., Nanan, R., Macia, L., Tan, J., Sominsky, L., Quinn, T. P., O'Hely, M., Ponsonby, A., Tang, M. L. K., Collier, F., Strickland, D. H., Dhar, P., Brix, S., Phipps, S., Sly, P. D., Ranganathan, S., Stokholm, Jakob, Kristiansen, Karsten, Gray, L. E. K. & Vuillermin, P., 2021, In: Journal of Allergy and Clinical Immunology. 148, 3, p. 669-678

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    The infant gut virome is associated with preschool asthma risk independently of bacteria

    Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial composition

    Li, Xuan Ji, Stokholm, Jakob, Brejnrod, A., Vestergaard, G. A., Russel, J., Trivedi, Urvish, Thorsen, Jonathan Jan Ilve, Gupta, S., Hjelmsø, M. H., Shah, S. A., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: Cell Host & Microbe. 29, 6, p. 975–987.e4 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    The developing hypopharyngeal microbiota in early life

    Mortensen, M. S., Brejnrod, A. D., Roggenbuck, M., Abu Al-Soud, W., Balle, C., Krogfelt, K. A., Stokholm, Jakob, Thorsen, Jonathan Jan Ilve, Waage, J. E., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2016, In: Microbiome. 4, 12 p., 70.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    The developing airway and gut microbiota in early life is influenced by age of older siblings

    Christensen, E. D., Hjelmsø, M. H., Thorsen, Jonathan Jan Ilve, Shah, S., Redgwell, T., Poulsen, Christina Egeø, Trivedi, Urvish, Russel, J., Gupta, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes, Rasmussen, Morten Arendt, Bisgaard, H. & Stokholm, Jakob, 2022, In: Microbiome. 10, 15 p., 106.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria

    Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    The Airway Microbiota Modulates Effect of Azithromycin Treatment for Episodes of Recurrent Asthma-like Symptoms in Preschool Children: A Randomized Clinical Trial

    Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Rasmussen, Morten Arendt, Mortensen, M. S., Brejnrod, A. D., Hjelmsø, M., Shah, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes & Bisgaard, H., 2021, In: American Journal of Respiratory and Critical Care Medicine. 204, 2, p. 149-158

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Symptom burden of atopic dermatitis in early childhood assessed from daily monitoring of symptoms and topical steroid use

    Ruge, I. F., Thorsteinsdóttir, S., Nørgaard, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Stokholm, Jakob & Bisgaard, H., 2021, In: Journal of the American Academy of Dermatology. 84, 3, p. 725-734 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Supplementation With Fish Oil in Pregnancy Reduces Gastroenteritis in Early Childhood

    Horner, David Lyle George, Hjelmsø, M. H., Thorsen, J., Rasmussen, Morten Arendt, Eliasen, A., Vinding, R. K., Schoos, Ann-Marie Malby, Brustad, N., Sunde, R. B., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Stokholm, Jakob & Bisgaard, H., 2023, In: Journal of Infectious Diseases. 227, 3, p. 448–456 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Single and multiple time-point allergic sensitization during childhood and risk of asthma by age 13

    Schoos, A. M. M., Jelding-Dannemand, E., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2019, In: Pediatric Allergy and Immunology. 30, 7, p. 716-723 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial

    Wei, S., Mortensen, M. S., Stokholm, Jakob, Brejnrod, A. D., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Trivedi, Urvish, Bisgaard, H. & Sørensen, Søren Johannes, 2018, In: EBioMedicine. 38, p. 265-272

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Sensitivity of multiple breath washout to detect mild-to-moderate asthma in adolescence

    Arianto, L., Hallas, H. W., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2019, In: The Journal of Allergy and Clinical Immunology: In Practice. 7, 6, p. 2052-2054.e5

    Research output: Contribution to journalLetterResearchpeer-review

  20. Published

    Season of birth shapes neonatal immune function

    Thysen, A. H., Rasmussen, Morten Arendt, Kreiner-Møller, E., Larsen, J. M., Følsgaard, N. V., Bønnelykke, Klaus, Stokholm, Jakob, Bisgaard, H. & Brix, S., 2016, In: Journal of Allergy and Clinical Immunology. 137, 4, p. 1238–1246.e13 22 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Season of Birth Impacts the Neonatal Nasopharyngeal Microbiota

    Schoos, A. M., Kragh, M., Ahrens, P., Kuhn, K. G., Rasmussen, Morten Arendt, Chawes, Bo Lund Krogsgaard, Jensen, J. S., Brix, S., Bisgaard, H. & Stokholm, Jakob, 2020, In: Children. 7, 5, 15 p., 45.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Safety of High-Dose Vitamin D Supplementation among Children Aged 0 to 6 Years: A Systematic Review and Meta-analysis

    Brustad, N., Yousef, S., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2022, In: JAMA network open. 5, 4, 14 p., E227410.

    Research output: Contribution to journalReviewResearchpeer-review

  23. Published

    Risk of Asthma from Cesarean Delivery Depends on Membrane Rupture

    Sevelsted, A., Stokholm, Jakob & Bisgaard, H., Apr 2016, In: The Journal of Pediatrics. 171, p. 38–42.e4 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Risk Factors and Age-Related Patterns of Asthma-Like Symptoms in Early Childhood

    Kyvsgaard, J. N., Chawes, Bo Lund Krogsgaard, Horner, David Lyle George, Hesselberg, L. M., Melgaard, M. E., Jensen, S. K., Schoos, Ann-Marie Malby, Thorsen, Jonathan Jan Ilve, Pedersen, C. E. T., Brustad, N., Bønnelykke, Klaus, Bisgaard, H. & Stokholm, Jakob, 2023, In: Journal of Allergy and Clinical Immunology: In Practice. 11, 6, p. 1773-1784.e10 22 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Reduced diversity of the intestinal microbiota during infancy is associated with increased risk of allergic disease at school age

    Bisgaard, H., Li, N., Bonnelykke, K., Chawes, B. L. K., Skov, T. H., Paludan-Müller, G., Stokholm, Jakob, Smith, B. & Krogfelt, K. A., 2011, In: Journal of Allergy and Clinical Immunology. 128, 3, p. 646-652.e5 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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