Jakob Stokholm
Associate Professor
Food Microbiology, Gut Health, and Fermentation
Rolighedsvej 26
1958 Frederiksberg C
- 2021
- Published
Airway immune mediator levels during asthma-like symptoms in young children and their possible role in response to azithromycin
Carlsson, C. J., Rasmussen, Morten Arendt, Pedersen, S. B., Wang, N., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus & Bisgaard, H., 2021, In: Allergy: European Journal of Allergy and Clinical Immunology. 76, 6, p. 1754-1764 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Neonatal airway immune profiles and asthma and allergy endpoints in childhood
Chawes, Bo Lund Krogsgaard, Wolsk, H. M., Carlsson, C. J., Rasmussen, Morten Arendt, Følsgaard, N., Stokholm, Jakob, Bønnelykke, Klaus, Brix, S., Schoos, A. M. & Bisgaard, H., 2021, In: Allergy: European Journal of Allergy and Clinical Immunology. 76, 12, p. 3713-3722Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The maternal gut microbiome during pregnancy and offspring allergy and asthma
Gao, Y., Nanan, R., Macia, L., Tan, J., Sominsky, L., Quinn, T. P., O'Hely, M., Ponsonby, A., Tang, M. L. K., Collier, F., Strickland, D. H., Dhar, P., Brix, S., Phipps, S., Sly, P. D., Ranganathan, S., Stokholm, Jakob, Kristiansen, Karsten, Gray, L. E. K. & Vuillermin, P., 2021, In: Journal of Allergy and Clinical Immunology. 148, 3, p. 669-678Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Association between childhood asthma and attention deficit hyperactivity or autism spectrum disorders: A systematic review with meta-analysis
Kaas, T. H., Vinding, R. K., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2021, In: Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology. 51, 2, p. 228-252 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Maternal 17q21 genotype influences prenatal vitamin D effects on offspring asthma/recurrent wheeze
Knihtilä, H. M., Kelly, R. S., Brustad, N., Huang, M., Kachroo, P., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus, Pedersen, C. T., Bisgaard, H., Litonjua, A. A., Lasky-Su, J. A. & Weiss, S. T., 2021, In: European Respiratory Journal. 58, 3, 2002012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Large-scale association analyses identify host factors influencing human gut microbiome composition
Kurilshikov, A., Medina-Gomez, C., Bacigalupe, R., Radjabzadeh, D., Wang, J., Demirkan, A., Le Roy, C. I., Raygoza Garay, J. A., Finnicum, C. T., Liu, X., Zhernakova, D. V., Bonder, M. J., Hansen, T. H., Frost, F., Rühlemann, M. C., Turpin, W., Moon, J. Y., Kim, H. N., Lüll, K., Barkan, E. & 84 others, , 2021, In: Nature Genetics. 53, p. 156-165 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Urbanized microbiota in infants, immune constitution and later risk of atopic diseases
Lehtimäki, J., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Hjelmsø, M., Shah, S., Mortensen, M. S., Trivedi, Urvish, Vestergaard, G., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2021, In: Journal of Allergy and Clinical Immunology. 148, 1, p. 234-243 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial composition
Li, Xuan Ji, Stokholm, Jakob, Brejnrod, A., Vestergaard, G. A., Russel, J., Trivedi, Urvish, Thorsen, Jonathan Jan Ilve, Gupta, S., Hjelmsø, M. H., Shah, S. A., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: Cell Host & Microbe. 29, 6, p. 975–987.e4 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling transfer of vaginal microbiota from mother to infant in early life
Mortensen, M. S., Rasmussen, Morten Arendt, Stokholm, Jakob, Brejnrod, A. D., Balle, C., Thorsen, J., Krogfelt, K. A., Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: eLife. 10, 19 p., e57051.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cost of Illness in Young Children: A Prospective Birth Cohort Study
Nørgaard, S. K., Vissing, N. H., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2021, In: Children. 8, 3, 13 p., 173.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On using kernel integration by graphical LASSO to study partial correlations between heterogeneous data sets
Nørgaard, S. K., Linder-Steinlein, K., Eliasen, A. U., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisggard, H., Smilde, A. K. & Rasmussen, Morten Arendt, 2021, In: Journal of Chemometrics. 35, 10, 19 p., e3324.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characteristics and Mechanisms of a Sphingolipid-associated Childhood Asthma Endotype
Rago, D., Pedersen, C. T., Huang, M., Kelly, R. S., Gürdeniz, G., Brustad, N., Knihtilä, H., Lee-Sarwar, K. A., Morin, A., Rasmussen, Morten Arendt, Stokholm, Jakob, Bønnelykke, Klaus, Litonjua, A. A., Wheelock, C. E., Weiss, S. T., Lasky-Su, J., Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2021, In: American Journal of Respiratory and Critical Care Medicine. 203, 7, p. 853-863 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Symptom burden of atopic dermatitis in early childhood assessed from daily monitoring of symptoms and topical steroid use
Ruge, I. F., Thorsteinsdóttir, S., Nørgaard, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Stokholm, Jakob & Bisgaard, H., 2021, In: Journal of the American Academy of Dermatology. 84, 3, p. 725-734 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fish oil supplementation in pregnancy and neurodevelopment in childhood - A randomized clinical trial
Sass, L., Bjarnadóttir, Elín, Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Vinding, R. K., Mora-Jensen, A. C., Thorsen, Jonathan Jan Ilve, Nørgaard, S., Ebdrup, Bjørn, Jepsen, J. R. M., Fagerlund, Birgitte, Bønnelykke, Klaus, Lauritzen, Lotte & Bisgaard, H., 2021, In: Child Development. 92, 4, p. 1624-1635 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Time trends of chronic immune diseases by year of birth in Danish registries
Sevelsted, A., Chawes, Bo Lund Krogsgaard, Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2021, In: European Journal of Epidemiology. 36, 11, p. 1179-1185 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Airway Microbiota Modulates Effect of Azithromycin Treatment for Episodes of Recurrent Asthma-like Symptoms in Preschool Children: A Randomized Clinical Trial
Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Rasmussen, Morten Arendt, Mortensen, M. S., Brejnrod, A. D., Hjelmsø, M., Shah, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes & Bisgaard, H., 2021, In: American Journal of Respiratory and Critical Care Medicine. 204, 2, p. 149-158Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
FUT2–ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses
Ahluwalia, T. S., Eliasen, A. U., Sevelsted, A., Pedersen, C-E. T., Stokholm, J., Chawes, B., Bork-Jensen, J., Grarup, N., Pedersen, O., Hansen, T., Linneberg, A., Sharma, A., Weiss, S. T., Evans, M. D., Jackson, D. J., Morin, A., Krogfelt, K. A., Schjørring, S., Mortensen, P. B., Hougaard, D. M. & 13 others, , 2020, In: Nature Communications. 11, 12 p., 6398.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of High-Dose vs Standard-Dose Vitamin D Supplementation in Pregnancy on Bone Mineralization in Offspring Until Age 6 Years: A Prespecified Secondary Analysis of a Double-Blinded, Randomized Clinical Trial
Brustad, N., Garland, J., Thorsen, Jonathan Jan Ilve, Sevelsted, A., Krakauer, M., Vinding, R. K., Stokholm, Jakob, Bønnelykke, Klaus, Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2020, In: JAMA Pediatrics. 174, 5, p. 419-427 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Early life bacterial airway colonization, local immune mediator response and risk of otitis media
Christensen, E. D., Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Pedersen, T. M., Brix, S., Krogfelt, K. A., Schjørring, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H. & Rasmussen, Morten Arendt, 2020, In: Journal of Medical Microbiology. 69, 8, p. 1124–1131 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Questionnaire development for the Lolland-Falster Health Study, Denmark: an iterative and incremental process
Egholm, C. L., Packness, A., Stokholm, Jakob, Rasmussen, K., Ellervik, Christina, Simonsen, Erik, Christensen, A. I. & Jepsen, R., Mar 2020, In: BMC Medical Research Methodology. 20, 7 p., 52.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Environmental shaping of the bacterial and fungal community in infant bed dust and correlations with the airway microbiota
Gupta, S., Hjelmsø, M. H., Lehtimäki, J., Li, Xuan Ji, Mortensen, M. S., Russel, J., Trivedi, Urvish, Rasmussen, Morten Arendt, Stokholm, Jakob, Bisgaard, H. & Sørensen, Søren Johannes, 2020, In: Microbiome. 8, 16 p., 115.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Children with Asthma Have Fixed Airway Obstruction through Childhood Unaffected by Exacerbations
Hallas, H. W., Chawes, Bo Lund Krogsgaard, Arianto, L., Rasmussen, Morten Arendt, Kunøe, A., Stokholm, Jakob, Bønnelykke, Klaus & Bisgaard, H., 2020, In: Journal of Allergy and Clinical Immunology: In Practice. 8, 4, p. 1263-1271Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prenatal dietary supplements influence the infant airway microbiota in a randomized factorial clinical trial
Hjelmsø, M. H., Shah, S. A., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Vestergaard, G., Mortensen, M. S., Brejnrod, A., Brix, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes, Stokholm, Jakob & Bisgaard, H., 2020, In: Nature Communications. 11, 10 p., 426.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages
Mathieu, A., Dion, M., Deng, Ling, Tremblay, D., Moncaut, E., Shah, S. A., Stokholm, Jakob, Krogfelt, K. A., Schjørring, S., Bisgaard, H., Nielsen, Dennis Sandris, Moineau, S. & Petit, M., 2020, In: Nature Communications. 11, 12 p., 378.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epigenetic landscape links upper airway microbiota in infancy with allergic rhinitis at 6 years of age
Morin, A., McKennan, C. G., Pedersen, C. T., Stokholm, Jakob, Chawes, Bo Lund Krogsgaard, Schoos, A. M., Naughton, K. A., Thorsen, Jonathan Jan Ilve, Mortensen, M. S., Vercelli, D., Trivedi, Urvish, Sørensen, Søren Johannes, Bisgaard, H., Nicolae, D. L., Bønnelykke, Klaus & Ober, C., 2020, In: Journal of Allergy and Clinical Immunology. 146, 6, p. 1358-1366Research output: Contribution to journal › Journal article › Research › peer-review
ID: 252282561
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Maturation of the gut microbiome and risk of asthma in childhood
Research output: Contribution to journal › Journal article › Research › peer-review
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392
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Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
277
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Research output: Contribution to journal › Journal article › Research › peer-review
Published