thw266 KU
Professor, Affiliate Professor
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Constrained vertebrate evolution by pleiotropic genes
Hu, H., Uesaka, M., Guo, S., Shimai, K., Lu, T., Li, F., Fujimoto, S., Ishikawa, M., Liu, S., Sasagawa, Y., KU, thw266, Kuratani, S., Yu, J., Kusakabe, T. G., Khaitovich, P. & Irie, N., Nov 2017, In: Nature Ecology and Evolution. 1, 11, p. 1722-1730 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly
Rando, H. M., Farre, M., Robson, M. P., Won, N. B., Johnson, J. L., Buch, R., Bastounes, E. R., Xiang, X., Feng, S., Liu, S., Xiong, Z., Kim, J., KU, thw266, Trut, L. N., Larkin, D. M. & Kukekova, A. V., 2018, In: Genes. 9, 6, 21 p., 308.Research output: Contribution to journal › Journal article › Research › peer-review
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Convergent transcriptional specializations in the brains of humans and song-learning birds
Pfenning, A. R., Hara, E., Whitney, O., Rivas, M. V., Wang, R., Roulhac, P. L., Howard, J. T., Wirthlin, M., Lovell, P. V., Ganapathy, G., Mouncastle, J., Moseley, M. A., Thompson, J. W., Soderblom, E. J., Iriki, A., Kato, M., Gilbert, M. T. P., Zhang, G., Bakken, T., Bongaarts, A. & 5 others, , 2014, In: Science. 346, 6215, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
Cross-comparison of the genome sequences from human, chimpanzee, Neanderthal and a Denisovan hominin identifies novel potentially compensated mutations
KU, thw266, Pei, Z., Ball, E. V., Mort, M., Kehrer-Sawatzki, H. & Cooper, D. N., 2011, In: Human Genomics (Online). 5, 5, p. 453-484 32 p.Research output: Contribution to journal › Journal article › Research › peer-review
Deep parallel sequencing reveals conserved and novel miRNAs in gill and hepatopancreas of giant freshwater prawn
Tan, T. T., Chen, M., Harikrishna, J. A., Khairuddin, N., Shamsudin, M. I. M., KU, thw266 & Bhassu, S., 2013, In: Fish and Shellfish Immunology. 35, 4, p. 1061-1069 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dense sampling of bird diversity increases power of comparative genomics
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Hart Reeve, A., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., Pacheco, G. & 130 others, , 2020, In: Nature. 587, 7833, p. 252-257Research output: Contribution to journal › Journal article › Research › peer-review
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Detoxification Genes Differ Between Cactus-, Fruit-, and Flower-Feeding Drosophila
Rane, R. V., Clarke, D. F., Pearce, S. L., KU, thw266, Hoffmann, A. A. & Oakeshott, J. G., 2019, In: The Journal of Heredity. 110, 1, p. 80-91 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Developmental plasticity shapes social traits and selection in a facultatively eusocial bee
Kapheim, K. M., Jones, B. M., Pan, H., Li, C., Harpur, B. A., Kent, C. F., Zayed, A., Ioannidis, P., Waterhouse, R. M., Kingwell, C., Stolle, E., Avalos, A., KU, thw266, McMillan, W. O. & Wcislo, W. T., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 24, p. 13615-13625 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast
Shen, Y., Gao, F., Wang, Y., Wang, Y., Zheng, J., Gong, J., Zhang, J., Luo, Z., Schindler, D., Deng, Y., Ding, W., Lin, T., Swidah, R., Zhao, H., Jiang, S., Zeng, C., Chen, S., Chen, T., Wang, Y., Luo, Y. & 11 others, , 2023, In: Cell Genomics. 3, 11, 19 p., 100364.Research output: Contribution to journal › Journal article › Research › peer-review
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Diverse coral reef invertebrates exhibit patterns of phylosymbiosis
O'Brien, P. A., Tan, S., Yang, C., Frade, P. R., Andreakis, N., Smith, H. A., Miller, D. J., Webster, N. S., KU, thw266 & Bourne, D. G., 2020, In: ISME Journal. 14, 9, p. 2211-2222 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi)
Kapheim, K. M., Pan, H., Li, C., Blatti, C., Harpur, B. A., Ioannidis, P., Jones, B. M., Kent, C. F., Ruzzante, L., Sloofman, L., Stolle, E., Waterhouse, R. M., Zayed, A., KU, thw266 & Wcislo, W. T., 2019, In: G3: Genes, Genomes, Genetics (Bethesda). 9, 3, p. 625-634Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome assemblies of four manakins
Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, Daniel Bilyeli, Hosner, Peter Andrew, Zhou, Y., KU, thw266 & Feng, S., 2022, In: Scientific Data. 9, 11 p., 564.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome of the Marco Polo Sheep (Ovis ammon polii)
Yang, Y., Wang, Y., Zhao, Y., Zhang, X., Li, R., Chen, L., KU, thw266, Jiang, Y., Qiu, Q., Wang, W., Wei, H. & Wang, K., Dec 2017, In: GigaScience. 6, 12, 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome of the leopard gecko, Eublepharis macularius
Xiong, Z., Li, F., Li, Q., Zhou, L., Gamble, T., Zheng, J., Kui, L., Li, C., Li, S., Yang, H. & KU, thw266, 2016, In: GigaScience. 5, 6 p., 47.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome of the milu (Elaphurus davidianus)
Zhang, C., Chen, L., Zhou, Y., Wang, K., Chemnick, L. G., Ryder, O. A., Wang, W., KU, thw266 & Qiu, Q., 2017, In: GigaScience. 7, 2, p. 1-6 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles
Greenwold, M. J., Bao, W., Jarvis, E. D., Hu, H., Li, C., Gilbert, M Thomas P, KU, thw266 & Sawyer, R. H., 2014, In: B M C Evolutionary Biology. 14, 16 p., 249.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic evolution of transposable elements, demographic history, and gene content of paleognathous birds
Wang, Z., Chen, G., KU, thw266 & Zhou, Q., 2021, In: Zoological Research. 42, 1, p. 51-61 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds
Xu, L., Auer, G., Peona, V., Suh, A., Deng, Y., Feng, S., KU, thw266, Blom, M. P. K., Christidis, L., Prost, S., Irestedt, M. & Zhou, Q., 2019, In: Nature Ecology and Evolution. 3, 5, p. 834-844 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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ETV2 induces endothelial, but not hematopoietic, lineage specification in birds
Weng, W., Deng, Y., Deviatiiarov, R., Hamidi, S., Kajikawa, E., Gusev, O., Kiyonari, H., KU, thw266 & Sheng, G., 2024, In: Life Science Alliance. 7, 6, 12 p., e202402694.Research output: Contribution to journal › Journal article › Research › peer-review
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Earth BioGenome Project: sequencing life for the future of life
Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., Durbin, R., Edwards, S. V., Forest, F., Gilbert, M. T. P., Goldstein, M. M., Grigoriev, I. V., Hackett, K. J., Haussler, D., Jarvis, E. D., Johnson, W. E., Patrinos, A., Richards, S., Castilla-Rubio, J. C., van Sluys, M-A. & 4 others, , 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4325-4333 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Eighty million years of rapid evolution of the primate Y chromosome
Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N., Qi, X. & 3 others, , 2023, In: Nature Ecology and Evolution. 7, 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Epigenetic modification and inheritance in sexual reversal of fish
Shao, C., Li, Q., Chen, S., Zhang, P., Lian, J., Hu, Q., Sun, B., Jin, L., Liu, S., Wang, Z., Zhao, H., Jin, Z., Liang, Z., Li, Y., Zheng, Q., Zhang, Y., Wang, J. & KU, thw266, 2014, In: Genome Research. 24, 4, p. 604-615 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Evidence for a single loss of mineralized teeth in the common avian ancestor
Meredith, R. W., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D. & Springer, M. S., 2014, In: Science. 346, 6215, 6 p., 1254390.Research output: Contribution to journal › Journal article › Research › peer-review
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Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks
Farre, M., Kim, J., Proskuryakova, A. A., Zhang, Y., Kulemzina, A. I., Li, Q., Zhou, Y., Xiong, Y., Johnson, J. L., Perelman, P. L., Johnson, W. E., Warren, W. C., Kukekova, A. V., KU, thw266, O'Brien, S. J., Ryder, O. A., Graphodatsky, A. S., Ma, J., Lewin, H. A. & Larkin, D. M., 2019, In: Genome Research. 29, 4, p. 576-589Research output: Contribution to journal › Journal article › Research › peer-review
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Evolution of the germline mutation rate across vertebrates
Bergeron, Lucie Adrienne, Besenbacher, S., Zheng, J., Li, P., Bertelsen, Mads Frost, Quintard, B., Hoffman, J. I., Li, Z., Leger, J. S., Shao, C., Stiller, Josefin, Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2023, In: Nature. 615, p. 285-291Research output: Contribution to journal › Journal article › Research › peer-review
ID: 40294134
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Molecular traces of alternative social organization in a termite genome
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Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior
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2709
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Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
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