Simon Rasmussen

Simon Rasmussen

Associate professor, group leader, Professor


  1. 2012
  2. Identification of acquired antimicrobial resistance genes

    Zankari, E., Hasman, H., Cosentino, S., Vestergaard, M., Rasmussen, Simon, Lund, O., Aarestrup, F. M. & Larsen, M. V., 2012, In: Journal of Antimicrobial Chemotherapy. 67, 11, p. 2640-4 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    snpTree--a web-server to identify and construct SNP trees from whole genome sequence data

    Leekitcharoenphon, P., Kaas, R. S., Thomsen, M. C. F., Friis, Carsten, Rasmussen, Simon & Aarestrup, F. M., 2012, In: BMC Genomics. 13 Suppl 7, p. S6

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. 2011
  5. Published

    An Aboriginal Australian genome reveals separate human dispersals into Asia

    Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, S., Albrechtsen, A., Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., Kivisild, T., Zhai, W., Eriksson, A., Manica, A., Orlando, L., De La Vega, F. M., Tridico, S., Metspalu, E., Nielsen, K., Avila Arcos, M. D. C. & 38 others, Moreno Mayar, J. Víctor, Muller, C., Dortch, J., Gilbert, M Thomas P, Lund, O., Wesolowska, A., Karmin, M., Weinert, L. A., Wang, B., Li, J., Tai, S., Xiao, F., Hanihara, T., van Driem, G., Jha, A. R., Ricaut, F., de Knijff, P., Migliano, A. B., Gallego Romero, I., Kristiansen, Karsten, Lambert, D. M., Brunak, Søren, Forster, P., Brinkmann, B., Nehlich, O., Bunce, M., Richards, M., Gupta, R., Bustamante, C. D., Krogh, Anders, Foley, R. A., Lahr, M. M., Balloux, F., Sicheritz-Pontén, T., Villems, R., Nielsen, Rasmus, Wang, J. & Willerslev, Eske, 2011, In: Science. 334, 6052, p. 94-98 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. 2010
  7. Published

    Bifidobacterium bifidum actively changes the gene expression profile induced by Lactobacillus acidophilus in murine dendritic cells

    Weiss, G. M., Rasmussen, Simon, Fink, L. N., Jarmer, H. Ø., Nielsen, B. M. N. & Frøkiær, Hanne, 2010, In: PLoS ONE. 5, 6, 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Lactobacillus acidophilus induces virus immune defence genes in murine dendritic cells by a Toll-like receptor-2-dependent mechanism

    Weiss, G. M., Rasmussen, Simon, Zeuthen, L., Nielsen, B. M. N., Jarmer, H. Ø., Jespersen, Lene & Frøkiær, Hanne, 2010, In: Immunology. 131, 2, p. 268-281 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. 2009
  10. Transcriptional landscape estimation from tiling array data using a model of signal shift and drift

    Nicolas, P., Leduc, A., Robin, S., Rasmussen, Simon, Jarmer, H. & Bessières, P., 15 Sep 2009, In: Bioinformatics (Online). 25, 18, p. 2341-7 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. The transcriptionally active regions in the genome of Bacillus subtilis

    Rasmussen, Simon, Nielsen, H. B. & Jarmer, H., Sep 2009, In: Molecular Microbiology. 73, 6, p. 1043-57 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Impaired uptake and/or utilization of leucine by Saccharomyces cerevisiae is suppressed by the SPT15-300 allele of the TATA-binding protein gene

    Baerends, R. J. S., Qiu, J., Rasmussen, Simon, Nielsen, H. B. & Brandt, A., 2009, In: Applied and Environmental Microbiology. 75, 19, p. 6055-6061 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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