Kresten Lindorff-Larsen
Professor
Biomolecular Sciences
Ole Maaløes Vej 5
2200 København N.
- 2000
Thiol alkylation below neutral pH
Lindorff-Larsen, Kresten & Winther, J. R., 2000, In: Analytical Biochemistry. 286, 2, p. 308-10 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2001
- Published
Barley lipid transfer protein, LTP1, contains a new type of lipid-like post-translational modification
Lindorff-Larsen, Kresten, Lerche, M. H., Poulsen, F. M., Roepstorff, P. & Winther, J. R., 2001, In: Journal of Biological Chemistry. 276, 36, p. 33547-53 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Surprisingly high stability of barley lipid transfer protein, LTP1, towards denaturant, heat and proteases
Lindorff-Larsen, Kresten & Winther, Jakob R., 2001, In: FEBS Letters. 488, 3, p. 145-148 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2003
Calculation of mutational free energy changes in transition states for protein folding
Lindorff-Larsen, Kresten, Paci, E., Serrano, L., Dobson, C. M. & Vendruscolo, M., 2003, In: Biophysical Journal. 85, 2, p. 1207-14 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Parallel protein-unfolding pathways revealed and mapped
Wright, C. F., Lindorff-Larsen, Kresten, Randles, L. G. & Clarke, J., 2003, In: Nature Structural and Molecular Biology. 10, 8, p. 658-62 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2004
Comparison of the transition state ensembles for folding of Im7 and Im9 determined using all-atom molecular dynamics simulations with phi value restraints
Paci, E., Friel, C. T., Lindorff-Larsen, Kresten, Radford, S. E., Karplus, M. & Vendruscolo, M., 2004, In: Proteins: Structure, Function, and Bioinformatics. 54, 3, p. 513-25 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
Determination of an ensemble of structures representing the denatured state of the bovine acyl-coenzyme a binding protein
Lindorff-Larsen, Kresten, Kristjansdottir, S., Teilum, K., Fieber, W., Dobson, C. M., Poulsen, F. M. & Vendruscolo, M., 2004, In: Journal of the American Chemical Society. 126, 10, p. 3291-3219 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
Transition states for protein folding have native topologies despite high structural variability
Lindorff-Larsen, Kresten, Vendruscolo, M., Paci, E. & Dobson, C. M., 2004, In: Nature Structural and Molecular Biology. 11, 5, p. 443-9 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2005
- Published
Formation of Native and Non-native Interactions in Ensembles of Denatured ACBP Molecules from Paramagnetic Relaxation Enhancement Studies
Kristjansdottir, S., Lindorff-Larsen, Kresten, Fieber, W., Dobson, C. M., Vendruscolo, M. & Poulsen, F. M., 2005, In: Journal of Molecular Biology. 347, 5, p. 1053-1062Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interpreting Dynamically-Averaged Scalar Couplings in Proteins
Lindorff-Larsen, Kresten, Best, R. B. & Vendruscolo, M., 2005, In: Journal of Biomolecular NMR. 32, 4, p. 273-280Research output: Contribution to journal › Journal article › Research › peer-review
Mapping Long-Range Interactions in a-Synuclein using Spin-Label NMR and Ensemble Molecular Dynamics Simulations
Dedmon, M. M., Lindorff-Larsen, Kresten, Christodoulou, J., Vendruscolo, M. & Dobson, C. M., 2005, In: Journal of the American Chemical Society. 127, 2, p. 476-477Research output: Contribution to journal › Journal article › Research › peer-review
Protein folding and the organization of the protein topology universe
Lindorff-Larsen, Kresten, Røgen, P., Paci, E., Vendruscolo, M. & Dobson, C. M., 2005, In: TIBS -Trends in Biochemical Sciences. Regular ed.. 30, 1, p. 13-19Research output: Contribution to journal › Journal article › Research
- Published
Simultaneous determination of protein structure and dynamics
Lindorff-Larsen, Kresten, Best, R. B., DePristo, M. A., Dobson, C. M. & Vendruscolo, M., 2005, In: Nature. 433, 7022, p. 128-132Research output: Contribution to journal › Journal article › Research › peer-review
Transition State Contact Orders Correlate with Protein Folding Rates
Paci, E., Lindorff-Larsen, Kresten, Dobson, C. M., Karplus, M. & Vendruscolo, M., 2005, In: Journal of Molecular Biology. 352, 3, p. 495-500Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
- Published
Characterization of the residual structure in the unfolded state of the Delta 131 Delta fragment of staphylococcal nuclease
Francis, C. J., Lindorff-Larsen, Kresten, Best, R. B. & Bendruscolo, M., 2006, In: Proteins - Structure Function and Bioinformatics. 65, 1, p. 145-52Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational fluctuations affect protein alignment in dilute liquid crystal media.
Louhivuori, M., Otten, R., Lindorff-Larsen, Kresten & Annila, A., 2006, In: Journal of the American Chemical Society. 128, 13, p. 4371-4376 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Relation between native ensembles and experimental structures of proteins.
Best, R. B., Lindorff-Larsen, Kresten, DePristo, M. A. & VEndruscolo, M., 2006, In: Proceedings of the National Academy of Science of the United States of America. 103, 29, p. 10901-6Research output: Contribution to journal › Journal article › Research › peer-review
Structure of the regulatory apparatus of a calcium-dependent protein kinase (CDPK): a novel mode of calmodulin-target recognition
Chandran, V., Stollar, E. J., Lindorff-Larsen, Kresten, Harper, J. F., Chazin, W. J., Dobson, C. M., Luisi, B. F. & Christodoulou, J., 2006, In: Journal of Molecular Biology. 357, 2, p. 400-10 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2007
BPPred: a Web-based computational tool for predicting biophysical parameters of proteins
Geierhaas, C. D., Nickson, A. A., Lindorff-Larsen, Kresten, Clarke, J. & Vendruscolo, M., 2007, In: Protein Science. 16, 1, p. 125-34 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detection of initiation sites in protein folding of the four helix bundle ACBP by chemical shift analysis.
Modig, K., Jürgensen, V. W., Lindorff-Larsen, Kresten, Fieber, W., Bohr, H. G. & Poulsen, F. M., 2007, In: FEBS Letters. 581, 25, p. 4965-4971 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2008
- Published
Experimental parameterization of an energy function for the simulation of unfolded proteins
Nørgaard, A. B., Ferkinghoff-Borg, J. & Lindorff-Larsen, Kresten, 2008, In: Biophysical Journal. 94, 1, p. 182-192Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins
Maragakis, P., Lindorff-Larsen, Kresten, Eastwood, M. P., Dror, R. O., Klepeis, J. L., Arkin, I. T., Jensen, M. Ø., Xu, H., Trbovic, N., Friesner, R. A., Iii, A. G. P. & Shaw, D. E., 2008, In: Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical. 112, 19, p. 6155-6158 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2009
Long-timescale molecular dynamics simulations of protein structure and function
Klepeis, J. L., Lindorff-Larsen, Kresten, Dror, R. O. & Shaw, D. E., 2009, In: Current Opinion in Structural Biology. 19, 2, p. 120-7 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Millisecond-scale molecular dynamics simulations on Anton
Shaw, D. E., Dror, R. O., Salmon, J. K., Grossman, J. P., Mackenzie, K. M., Bank, J. A., Young, C., Deneroff, M. M., Batson, B., Bowers, K. J., Chow, E., Eastwood, M. P., Ierardi, D., Klepeis, J. L., Kuskin, J., Larson, R. H., Lindorff-Larsen, K., Maragakis, P., Moraes, M. A., Piana, S. & 2 others, , 2009, Proceedings of the Conference on High Performance Computing Networking, Storage and Analysis. Association for Computing Machinery, 11 p.Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Similarity measures for protein ensembles
Lindorff-Larsen, Kresten & Ferkinghoff-Borg, J., 2009, In: PLoS ONE. 4, 1, 13 p., e4203.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 35228567
Most downloads
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2308
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Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
911
downloads
Similarity measures for protein ensembles
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
847
downloads
Evaluating the effects of cutoffs and treatment of long-range electrostatics in protein folding simulations
Research output: Contribution to journal › Journal article › Research › peer-review