Albin Gustav Sandelin
Professor
Computational and RNA Biology
Ole Maaløes Vej 5
2200 København N.
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A Functional Link between Nuclear RNA Decay and Transcriptional Control Mediated by the Polycomb Repressive Complex 2
Garland, W., Comet, I., Wu, M., Radzisheuskaya, A., Rib, Leonor, Vitting-Seerup, K., Lloret-Llinares, M., Sandelin, Albin Gustav, Helin, K. & Jensen, T. H., 2019, In: Cell Reports. 29, 7, p. 1800-1811 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network
Grapotte, M., Saraswat, M., Bessière, C., Menichelli, C., Ramilowski, J. A., Severin, J., Hayashizaki, Y., Itoh, M., Tagami, M., Murata, M., Kojima-Ishiyama, M., Noma, S., Noguchi, S., Kasukawa, T., Hasegawa, A., Suzuki, H., Nishiyori-Sueki, H., Frith, M. C., Abugessaisa, I., Aitken, S. & 31 others, , 2021, In: Nature Communications. 12, 18 p., 3297.Research output: Contribution to journal › Journal article › Research › peer-review
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Acute Genome-wide effects of Rosiglitazone on PPARγ transcriptional networks in Adipocytes
Haakonsson, A. K., Madsen, M. S., Nielsen, R., Sandelin, Albin Gustav & Mandrup, S., 2013, In: Molecular Endocrinology. 27, 9, p. 1536-1549 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The constrained maximal expression level owing to haploidy shapes gene content on the mammalian X chromosome
Hurst, L. D., Ghanbarian, A. T., Forrest, A. R. R., Huminiecki, L., Rehli, M., Kenneth Baillie, J., de Hoon, M. J. L., Haberle, V., Lassmann, T., Kulakovskiy, I. V., Lizio, M., Itoh, M., Andersson, R., Mungall, C. J., Meehan, T. F., Schmeier, S., Bertin, N., Jørgensen, M., Dimont, E., Arner, E. & 243 others, , 2015, In: PLoS Biology. 13, 12, 48 p., e1002315.Research output: Contribution to journal › Journal article › Research › peer-review
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On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase
Ienasescu, H., Li, K., Andersson, Robin, Vitezic, M., Rennie, Sarah, Chen, Y., Vitting-Seerup, K., Lagoni, E., Boyd, M., Lange, Jette Bornholdt, de Hoon, M. J. L., Kawaji, H., Lassmann, T., FANTOM Consortium, F. C., Hayashizaki, Y., Forrest, A. R. R., Carninci, P. & Sandelin, Albin Gustav, 2016, In: Database: The Journal of Biological Databases and Curation. 2016, 0, 10 p., baw144.Research output: Contribution to journal › Journal article › Research › peer-review
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TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes
Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcriptome analysis of recurrently deregulated genes across multiple cancers identifies new pan-cancer biomarkers
Kaczkowski, B., Tanaka, Y., Kawaji, H., Sandelin, Albin Gustav, Andersson, Robin, Itoh, M., Lassmann, T., the FANTOM5 consortium, Hayashizaki, Y., Carninci, P. & Forrest, A. R. R., 2016, In: Cancer Research. 76, 2, p. 216-226Research output: Contribution to journal › Journal article › Research › peer-review
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Dynamic usage of transcription start sites within core promoters.
Kawaji, H., Frith, M. C., Katayama, S., Sandelin, Albin Gustav, Kai, C., Kawai, J., Carninci, P. & Hayashizaki, Y., 2006, In: Genome Biology. 7, 12, p. R118Research output: Contribution to journal › Journal article › Research › peer-review
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Hidden layers of human small RNAs
Kawaji, H., Nakamura, M., Takahashi, Y., Sandelin, Albin Gustav, Katayama, S., Fukuda, S., Daub, C. O., Kai, C., Kawai, J., Yasuda, J., Carninci, P. & Hayashizaki, Y., 2008, In: BMC Genomics. 9, p. 157Research output: Contribution to journal › Journal article › Research › peer-review
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JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Khan, A., Fornes, O., Stigliani, A., Gheorghe, M., Castro-Mondragon, J. A., van der Lee, R., Bessy, A., Chèneby, J., Kulkarni, S. R., Tan, G., Baranasic, D., Arenillas, D. J., Sandelin, Albin Gustav, Vandepoele, K., Lenhard, B., Ballester, B., Wasserman, W. W., Parcy, F. & Mathelier, A., 2018, In: Nucleic Acids Research. 46, D1, p. D260-D266 7 p., gkx1126.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 5007
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3481
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spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data
Research output: Contribution to journal › Journal article › Research › peer-review
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3332
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Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data
Research output: Contribution to journal › Journal article › Research › peer-review
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2986
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Multivariate Hawkes process models of the occurrence of regulatory elements
Research output: Contribution to journal › Journal article › Research › peer-review
Published