Rute Andreia Rodrigues da Fonseca
Associate Professor
Section for Biodiversity
Universitetsparken 15, København Ø
Section for Biodiversity
Universitetsparken 15, 2100 København Ø
- Published
Evolution of the extracytoplasmic function σ factor protein family
Pinto, D. & Rodrigues da Fonseca, Rute Andreia, 2020, In: NAR Genomics and Bioinformatics. 2, 1, 13 p., lqz026.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DivA: detection of non-homologous and very divergent regions in protein sequence alignments
Zepeda Mendoza, M. L., Nygaard, S. & Rodrigues da Fonseca, Rute Andreia, 2014, In: BMC Research Notes. 7, 806, 6 p., 806.Research output: Contribution to journal › Journal article › Research › peer-review
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Dense sampling of bird diversity increases power of comparative genomics
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Hart Reeve, A., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., Pacheco, G. & 130 others, , 2020, In: Nature. 587, 7833, p. 252-257Research output: Contribution to journal › Journal article › Research › peer-review
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Declining genetic diversity of European honeybees along the twentieth century
Themudo, G. E., Rey de la Iglesia, Alba, Tascón, L. R., Jensen, Annette Bruun, Rodrigues da Fonseca, Rute Andreia & Campos, P. F., 29 Jun 2020, In: Scientific Reports. 10, 12 p., 10520.Research output: Contribution to journal › Journal article › Research › peer-review
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Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Consequences of breed formation on patterns of genomic diversity and differentiation: the case of highly diverse peripheral Iberian cattle
Rodrigues da Fonseca, Rute Andreia, Urena, I., Afonso, S., Pires, A. E., Jørsboe, E., Chikhi, L. & Ginja, C., 2019, In: BMC Genomics. 20, p. 1-13 334.Research output: Contribution to journal › Journal article › Research › peer-review
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Complexity of avian evolution revealed by family-level genomes
Stiller, J., Feng, S., Chowdhury, A-A., Rivas-González, I., Duchêne, D. A., Fang, Q., Deng, Y., Kozlov, A., Stamatakis, A., Claramunt, S., Nguyen, J. M. T., Ho, S. Y. W., Faircloth, B. C., Haag, J., Houde, P., Cracraft, J., Balaban, M., Mai, U., Chen, G., Gao, R. & 32 others, , 2024, In: Nature. 629, p. 851–860 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Complete Inactivation of Sebum-Producing Genes Parallels the Loss of Sebaceous Glands in Cetacea
Lopes-Marques, M., Machado, A. M., Alves, L. Q., Fonseca, M. M., Barbosa, S., Sinding, M. S., Rasmussen, M. H., Iversen, M. R., Bertelsen, Mads Frost, Campos, P. F., Rodrigues da Fonseca, Rute Andreia, Ruivo, R. & Castro, L. F. C., 2019, In: MOLECULAR BIOLOGY AND EVOLUTION . 36, 6, p. 1270-1280Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative genomics reveals insights into avian genome evolution and adaptation
Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., Hu, H., Yang, W. & 85 others, , 2014, In: Science. 346, 6215, p. 1311-1320 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative genomics provides insights into the aquatic adaptations of mammals
Yuan, Y., Zhang, Y., Zhang, P., Liu, C., Wang, J., Gao, H., Rus Hoelzel, A., Seim, I., Lv, M., Lin, M., Dong, L., Gao, H., Yang, Z., Caruso, F., Lin, W., Da Fonseca, R. R., Wang, D., Wang, X., Rasmussen, M. H., Liu, M. & 21 others, , 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 37, 9 p., e2106080118.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 33270633
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3000
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DivA: detection of non-homologous and very divergent regions in protein sequence alignments
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1040
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The elusive nature of adaptive mitochondrial DNA evolution of an Arctic lineage prone to frequent introgression
Research output: Contribution to journal › Journal article › Research › peer-review
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1004
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Ancient genomics
Research output: Contribution to journal › Review › Research › peer-review
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