Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone

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Standard

Combined PET/MR imaging in neurology : MR-based attenuation correction implies a strong spatial bias when ignoring bone. / Andersen, Flemming Littrup; Ladefoged, Claes Nøhr; Beyer, Thomas; Keller, Sune Høgild; Hansen, Adam Espe; Højgaard, Liselotte; Kjær, Andreas; Law, Ian; Holm, Søren.

In: NeuroImage, Vol. 84, 01.01.2014, p. 206-216.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Andersen, FL, Ladefoged, CN, Beyer, T, Keller, SH, Hansen, AE, Højgaard, L, Kjær, A, Law, I & Holm, S 2014, 'Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone', NeuroImage, vol. 84, pp. 206-216. https://doi.org/10.1016/j.neuroimage.2013.08.042

APA

Andersen, F. L., Ladefoged, C. N., Beyer, T., Keller, S. H., Hansen, A. E., Højgaard, L., ... Holm, S. (2014). Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone. NeuroImage, 84, 206-216. https://doi.org/10.1016/j.neuroimage.2013.08.042

Vancouver

Andersen FL, Ladefoged CN, Beyer T, Keller SH, Hansen AE, Højgaard L et al. Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone. NeuroImage. 2014 Jan 1;84:206-216. https://doi.org/10.1016/j.neuroimage.2013.08.042

Author

Andersen, Flemming Littrup ; Ladefoged, Claes Nøhr ; Beyer, Thomas ; Keller, Sune Høgild ; Hansen, Adam Espe ; Højgaard, Liselotte ; Kjær, Andreas ; Law, Ian ; Holm, Søren. / Combined PET/MR imaging in neurology : MR-based attenuation correction implies a strong spatial bias when ignoring bone. In: NeuroImage. 2014 ; Vol. 84. pp. 206-216.

Bibtex

@article{de649c61057a408fb5f10679f5e7e377,
title = "Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone",
abstract = "AIM: Combined PET/MR systems have now become available for clinical use. Given the lack of integrated standard transmission (TX) sources in these systems, attenuation and scatter correction (AC) must be performed using the available MR-images. Since bone tissue cannot easily be accounted for during MR-AC, PET quantification can be biased, in particular, in the vicinity of the skull. Here, we assess PET quantification in PET/MR imaging of patients using phantoms and patient data.MATERIALS AND METHODS: Nineteen patients referred to our clinic for a PET/CT exam as part of the diagnostic evaluation of suspected dementia were included in our study. The patients were injected with 200MBq [(18)F]FDG and imaged with PET/CT and PET/MR in random sequence within 1h. Both, PET/CT and PET/MR were performed as single-bed acquisitions without contrast administration. PET/CT and PET/MR data were reconstructed following CT-based and MR-based AC, respectively. MR-AC was performed based on: (A) standard Dixon-Water-Fat segmentation (DWFS), (B) DWFS with co-registered and segmented CT bone values superimposed, and (C) with co-registered full CT-based attenuation image. All PET images were reconstructed using AW-OSEM, with neither resolution recovery nor time-of-flight option employed. PET/CT (D) or PET/MR (A-C) images were decay-corrected to the start time of the first examination. PET images following AC were evaluated visually and quantitatively using 10 homeomorphic regions of interest drawn on a transaxial T1w-MR image traversing the central basal ganglia. We report the relative difference ({\%}) of the mean ROI values for (A)-(C) in reference to PET/CT (D). In a separate phantom experiment a 2L plastic bottle was layered with approximately 12mm of Gypsum plaster to mimic skull bone. The phantom was imaged on PET/CT only and standard MR-AC was performed by replacing hyperdense CT attenuation values corresponding to bone (plaster) with attenuation values of water. PET image reconstruction was performed with CT-AC (D) and CT-AC using the modified CT images corresponding to MR-AC using DWFS (A).RESULTS: PET activity values in patients following MR-AC (A) showed a substantial radial dependency when compared to PET/CT. In all patients cortical PET activity was lower than the activity in the central region of the brain (10-15{\%}). When adding bone attenuation values to standard MR-AC (B and C) the radial gradient of PET activity values was removed. Further evaluation of PET/MR activity following MR-AC (A) relative to MR-AC (C) using the full CT for attenuation correction showed an underestimation of 25{\%} in the cortical regions and 5-10{\%} in the central regions of the brain. Observations in patients were replicated by observations from the phantom study.CONCLUSION: Our phantom and patient data demonstrate a spatially varying bias of the PET activity in PET/MR images of the brain when bone tissue is not accounted for during attenuation correction. This has immediate implications for PET/MR imaging of the brain. Therefore, refinements to existing MR-AC methods or alternative strategies need to be found prior to adopting PET/MR imaging of the brain in clinical routine and research.",
keywords = "Adult, Aged, Aged, 80 and over, Artifacts, Brain, Dementia, Female, Humans, Image Enhancement, Magnetic Resonance Imaging, Male, Middle Aged, Multimodal Imaging, Positron-Emission Tomography, Reproducibility of Results, Sensitivity and Specificity, Skull",
author = "Andersen, {Flemming Littrup} and Ladefoged, {Claes N{\o}hr} and Thomas Beyer and Keller, {Sune H{\o}gild} and Hansen, {Adam Espe} and Liselotte H{\o}jgaard and Andreas Kj{\ae}r and Ian Law and S{\o}ren Holm",
note = "{\circledC} 2013 Elsevier Inc. All rights reserved.",
year = "2014",
month = "1",
day = "1",
doi = "10.1016/j.neuroimage.2013.08.042",
language = "English",
volume = "84",
pages = "206--216",
journal = "NeuroImage",
issn = "1053-8119",
publisher = "Elsevier",

}

RIS

TY - JOUR

T1 - Combined PET/MR imaging in neurology

T2 - MR-based attenuation correction implies a strong spatial bias when ignoring bone

AU - Andersen, Flemming Littrup

AU - Ladefoged, Claes Nøhr

AU - Beyer, Thomas

AU - Keller, Sune Høgild

AU - Hansen, Adam Espe

AU - Højgaard, Liselotte

AU - Kjær, Andreas

AU - Law, Ian

AU - Holm, Søren

N1 - © 2013 Elsevier Inc. All rights reserved.

PY - 2014/1/1

Y1 - 2014/1/1

N2 - AIM: Combined PET/MR systems have now become available for clinical use. Given the lack of integrated standard transmission (TX) sources in these systems, attenuation and scatter correction (AC) must be performed using the available MR-images. Since bone tissue cannot easily be accounted for during MR-AC, PET quantification can be biased, in particular, in the vicinity of the skull. Here, we assess PET quantification in PET/MR imaging of patients using phantoms and patient data.MATERIALS AND METHODS: Nineteen patients referred to our clinic for a PET/CT exam as part of the diagnostic evaluation of suspected dementia were included in our study. The patients were injected with 200MBq [(18)F]FDG and imaged with PET/CT and PET/MR in random sequence within 1h. Both, PET/CT and PET/MR were performed as single-bed acquisitions without contrast administration. PET/CT and PET/MR data were reconstructed following CT-based and MR-based AC, respectively. MR-AC was performed based on: (A) standard Dixon-Water-Fat segmentation (DWFS), (B) DWFS with co-registered and segmented CT bone values superimposed, and (C) with co-registered full CT-based attenuation image. All PET images were reconstructed using AW-OSEM, with neither resolution recovery nor time-of-flight option employed. PET/CT (D) or PET/MR (A-C) images were decay-corrected to the start time of the first examination. PET images following AC were evaluated visually and quantitatively using 10 homeomorphic regions of interest drawn on a transaxial T1w-MR image traversing the central basal ganglia. We report the relative difference (%) of the mean ROI values for (A)-(C) in reference to PET/CT (D). In a separate phantom experiment a 2L plastic bottle was layered with approximately 12mm of Gypsum plaster to mimic skull bone. The phantom was imaged on PET/CT only and standard MR-AC was performed by replacing hyperdense CT attenuation values corresponding to bone (plaster) with attenuation values of water. PET image reconstruction was performed with CT-AC (D) and CT-AC using the modified CT images corresponding to MR-AC using DWFS (A).RESULTS: PET activity values in patients following MR-AC (A) showed a substantial radial dependency when compared to PET/CT. In all patients cortical PET activity was lower than the activity in the central region of the brain (10-15%). When adding bone attenuation values to standard MR-AC (B and C) the radial gradient of PET activity values was removed. Further evaluation of PET/MR activity following MR-AC (A) relative to MR-AC (C) using the full CT for attenuation correction showed an underestimation of 25% in the cortical regions and 5-10% in the central regions of the brain. Observations in patients were replicated by observations from the phantom study.CONCLUSION: Our phantom and patient data demonstrate a spatially varying bias of the PET activity in PET/MR images of the brain when bone tissue is not accounted for during attenuation correction. This has immediate implications for PET/MR imaging of the brain. Therefore, refinements to existing MR-AC methods or alternative strategies need to be found prior to adopting PET/MR imaging of the brain in clinical routine and research.

AB - AIM: Combined PET/MR systems have now become available for clinical use. Given the lack of integrated standard transmission (TX) sources in these systems, attenuation and scatter correction (AC) must be performed using the available MR-images. Since bone tissue cannot easily be accounted for during MR-AC, PET quantification can be biased, in particular, in the vicinity of the skull. Here, we assess PET quantification in PET/MR imaging of patients using phantoms and patient data.MATERIALS AND METHODS: Nineteen patients referred to our clinic for a PET/CT exam as part of the diagnostic evaluation of suspected dementia were included in our study. The patients were injected with 200MBq [(18)F]FDG and imaged with PET/CT and PET/MR in random sequence within 1h. Both, PET/CT and PET/MR were performed as single-bed acquisitions without contrast administration. PET/CT and PET/MR data were reconstructed following CT-based and MR-based AC, respectively. MR-AC was performed based on: (A) standard Dixon-Water-Fat segmentation (DWFS), (B) DWFS with co-registered and segmented CT bone values superimposed, and (C) with co-registered full CT-based attenuation image. All PET images were reconstructed using AW-OSEM, with neither resolution recovery nor time-of-flight option employed. PET/CT (D) or PET/MR (A-C) images were decay-corrected to the start time of the first examination. PET images following AC were evaluated visually and quantitatively using 10 homeomorphic regions of interest drawn on a transaxial T1w-MR image traversing the central basal ganglia. We report the relative difference (%) of the mean ROI values for (A)-(C) in reference to PET/CT (D). In a separate phantom experiment a 2L plastic bottle was layered with approximately 12mm of Gypsum plaster to mimic skull bone. The phantom was imaged on PET/CT only and standard MR-AC was performed by replacing hyperdense CT attenuation values corresponding to bone (plaster) with attenuation values of water. PET image reconstruction was performed with CT-AC (D) and CT-AC using the modified CT images corresponding to MR-AC using DWFS (A).RESULTS: PET activity values in patients following MR-AC (A) showed a substantial radial dependency when compared to PET/CT. In all patients cortical PET activity was lower than the activity in the central region of the brain (10-15%). When adding bone attenuation values to standard MR-AC (B and C) the radial gradient of PET activity values was removed. Further evaluation of PET/MR activity following MR-AC (A) relative to MR-AC (C) using the full CT for attenuation correction showed an underestimation of 25% in the cortical regions and 5-10% in the central regions of the brain. Observations in patients were replicated by observations from the phantom study.CONCLUSION: Our phantom and patient data demonstrate a spatially varying bias of the PET activity in PET/MR images of the brain when bone tissue is not accounted for during attenuation correction. This has immediate implications for PET/MR imaging of the brain. Therefore, refinements to existing MR-AC methods or alternative strategies need to be found prior to adopting PET/MR imaging of the brain in clinical routine and research.

KW - Adult

KW - Aged

KW - Aged, 80 and over

KW - Artifacts

KW - Brain

KW - Dementia

KW - Female

KW - Humans

KW - Image Enhancement

KW - Magnetic Resonance Imaging

KW - Male

KW - Middle Aged

KW - Multimodal Imaging

KW - Positron-Emission Tomography

KW - Reproducibility of Results

KW - Sensitivity and Specificity

KW - Skull

U2 - 10.1016/j.neuroimage.2013.08.042

DO - 10.1016/j.neuroimage.2013.08.042

M3 - Journal article

VL - 84

SP - 206

EP - 216

JO - NeuroImage

JF - NeuroImage

SN - 1053-8119

ER -

ID: 138507585