Sune Darkner

Sune Darkner

Associate Professor

  • Image Analysis, Computational Modelling and Geometry

    Universitetsparken 5, 2100 København Ø

    Phone: +45 35 33 57 02Mobile: +45 21 30 85 84

  1. Published

    3D analysis of synaptic vesicle density and distribution after acute foot-shock stress by using serial section transmission electron microscopy. / Khanmohammadi, Mahdieh; Darkner, Sune; Nava, Nicoletta; Nyengaard, J. R.; Wegener, G.; Popoli, M.; Sporring, Jon.

    In: Journal of Microscopy, Vol. 265, No. 1, 2017, p. 101–110.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    3D estimation of synaptic vesicle distributions in serial section transmission electron microscopy. / Khanmohammadi, Mahdieh; Darkner, Sune; Nava, Nicoletta; Nyengaard, Jens Randel; Sporring, Jon.

    2013. Abstract from European Congress of Stereology and Image Analysis, Kaiserslautern, Germany.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  3. Published

    A Highly Accurate Model Based Registration Method for FIB-SEM Images of Neurons. / Stephensen, Hans Jacob Teglbjærg; Darkner, Sune; Sporring, Jon.

    In: arXiv.org, 2019.

    Research output: Contribution to journalJournal articleResearch

  4. Published

    A hyper elasticity method for interactive virtual design of hearing aids : a parallel method for general non-linear hyper elasticity modeling. / Darkner, Sune; Erleben, Kenny.

    In: Visual Computer, Vol. 27, No. 6, 2011, p. 645-653.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images. / Pai, Akshay Sadananda Uppinakudru; Sommer, Stefan Horst; Raket, Lars Lau; Kühnel, Line; Darkner, Sune; Sørensen, Lauge; Nielsen, Mads.

    Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. ed. / Henning Müller; B. Michael Kelm; Tal Arbel; Weidong Cai; M. Jorge Cardoso; Georg Langs; Bjoern Menze; Dmitris Metaxas; Albert Montillo; William M. Wells; Shaoting Zhang; Albert C. S. Chung; Mark Jenkinson; Annemie Ribbens. Springer, 2017. p. 151-159 (Lecture notes in computer science, Vol. 10081).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  6. Published

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error. / Pai, Akshay Sadananda Uppinakudru; Klein, Stefan; Sommer, Stefan Horst; Sørensen, Lauge; Darkner, Sune; Sporring, Jon; Nielsen, Mads.

    Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, 2015. p. 35-47.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  7. Published

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error. / Pai, Akshay Sadananda Uppinakudru; Klein, Stefan; Sommer, Stefan Horst; Sørensen, Lauge Emil Borch Laurs; Darkner, Sune; Sporring, Jon; Nielsen, Mads.

    The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , 2015. p. 35-47.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  8. Published

    Automatic FDG-PET-based tumor and metastatic lymph node segmentation in cervical cancer. / Rodríguez Arbonès, Dídac; Jensen, Henrik Grønholt; Loft, Annika; af Rosenschöld, Per Munck; Hansen, Anders Elias; Igel, Christian; Darkner, Sune.

    Medical Imaging 2014: Image Processing. ed. / Sebastian Ourselin; Martin A. Styner. SPIE - International Society for Optical Engineering, 2014. 903441 (Progress in Biomedical Optics and Imaging; No. 35, Vol. 15).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  9. Published

    Automatic correction of dental artifacts in PET/MRI. / Ladefoged, Claes N.; Andersen, Flemming L.; Keller, Sune; Beyer, Thomas; Law, Ian; Højgaard, Liselotte; Darkner, Sune; Lauze, Francois Bernard.

    In: SPIE Journal of Medical Imaging, Vol. 2, No. 2, 024009, 2015.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Automatic measurement of wrist synovitis from contrast-enhanced MRI : a registration-centered approach . / Mysling, Peter; Darkner, Sune; Sporring, Jon; Dam, Erik; Lillholm, Martin.

    Medical Imaging 2013: Image Processing. ed. / Sebastien Ourselin; David R. Haynor. SPIE - International Society for Optical Engineering, 2013. 86692U (Progress in Biomedical Optics and Imaging; No. 36, Vol. 14).

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

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