Matthias Mann

Matthias Mann

Research director, professor


  1. 2013
  2. N-linked glycosylation enrichment for in-depth cell surface proteomics of diffuse large B-cell lymphoma subtypes. / Deeb, Sally J; Cox, Juergen; Schmidt-Supprian, Marc; Mann, Matthias.

    In: Molecular & Cellular Proteomics, 04.11.2013.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Status of large-scale analysis of post-translational modifications by mass spectrometry. / Olsen, Jesper V; Mann, Matthias.

    In: Molecular & Cellular Proteomics, Vol. 12, 01.11.2013, p. 3444-52.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. A DNA-Centric Protein Interaction Map of Ultraconserved Elements Reveals Contribution of Transcription Factor Binding Hubs to Conservation. / Viturawong, Tar; Meissner, Felix; Butter, Falk; Mann, Matthias.

    In: Plant Cell Reports, Vol. 5, No. 2, 31.10.2013, p. 531-45.

    Research output: Contribution to journalJournal articleResearch

  5. Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators. / Scheibe, Marion; Arnoult, Nausica; Kappei, Dennis; Buchholz, Frank; Decottignies, Anabelle; Butter, Falk; Mann, Matthias.

    In: Genome Research, 22.10.2013.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators. / Scheibe, Marion; Arnoult, Nausica; Kappei, Dennis; Buchholz, Frank; Decottignies, Anabelle; Butter, Falk; Mann, Matthias.

    In: Genome Research, 22.10.2013.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. DEAD box protein DDX1 regulates cytoplasmic localization of KSRP. / Chou, Chu-Fang; Lin, Wei-Jye; Lin, Chen-Chung; Luber, Christian A; Godbout, Roseline; Mann, Matthias; Chen, Ching-Yi.

    In: P L o S One, Vol. 8, No. 9, e73752, 04.09.2013.

    Research output: Contribution to journalJournal articleResearch

  8. SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers. / Zanivan, Sara; Maione, Federica; Hein, Marco Y; Hernández-Fernaud, Juan Ramon; Ostasiewicz, Pawel; Giraudo, Enrico; Mann, Matthias.

    In: Molecular & Cellular Proteomics, 26.08.2013.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Interaction between AP-5 and the hereditary spastic paraplegia proteins SPG11 and SPG15. / Hirst, Jennifer; Borner, Georg H H; Edgar, James; Hein, Marco Y; Mann, Matthias; Buchholz, Frank; Antrobus, Robin; Robinson, Margaret S.

    In: Molecular Biology of the Cell, Vol. 24, No. 16, 08.2013, p. 2558-69.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Alleles of a polymorphic ETV6 binding site in DCDC2 confer risk of reading and language impairment. / Powers, Natalie R; Eicher, John D; Butter, Falk; Kong, Yong; Miller, Laura L; Ring, Susan M; Mann, Matthias; Gruen, Jeffrey R.

    In: American Journal of Human Genetics, Vol. 93, No. 1, 11.07.2013, p. 19-28.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. / Kappei, Dennis; Butter, Falk; Benda, Christian; Scheibe, Marion; Draškovič, Irena; Stevense, Michelle; Novo, Clara Lopes; Basquin, Claire; Araki, Masatake; Araki, Kimi; Krastev, Dragomir Blazhev; Kittler, Ralf; Jessberger, Rolf; Londoño-Vallejo, J Arturo; Mann, Matthias; Buchholz, Frank.

    In: E M B O Journal, Vol. 32, No. 12, 12.06.2013, p. 1681-701.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. High performance computational analysis of large-scale proteome data sets to assess incremental contribution to coverage of the human genome. / Neuhauser, Nadin; Nagaraj, Nagarjuna; McHardy, Peter; Zanivan, Sara; Scheltema, Richard; Cox, Jürgen; Mann, Matthias.

    In: Journal of Proteome Research, Vol. 12, No. 6, 07.06.2013, p. 2858-68.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. A large synthetic peptide and phosphopeptide reference library for mass spectrometry-based proteomics. / Marx, Harald; Lemeer, Simone; Schliep, Jan Erik; Matheron, Lucrece; Mohammed, Shabaz; Cox, Jürgen; Mann, Matthias; Heck, Albert J R; Kuster, Bernhard.

    In: Nature Biotechnology, Vol. 31, No. 6, 06.2013, p. 557-64.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Initial quantitative proteomic map of 28 mouse tissues using the SILAC mouse. / Geiger, Tamar; Velic, Ana; Macek, Boris; Lundberg, Emma; Kampf, Caroline; Nagaraj, Nagarjuna; Uhlen, Mathias; Cox, Juergen; Mann, Matthias.

    In: Molecular & Cellular Proteomics, Vol. 12, No. 6, 06.2013, p. 1709-22.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Quantitative proteomic analysis reveals concurrent RNA-protein interactions and identifies new RNA-binding proteins in Saccharomyces cerevisiae. / Klass, Daniel M; Scheibe, Marion; Butter, Falk; Hogan, Gregory J; Mann, Matthias; Brown, Patrick O.

    In: Genome Research, Vol. 23, No. 6, 06.2013, p. 1028-38.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. β1- and αv-class integrins cooperate to regulate myosin II during rigidity sensing of fibronectin-based microenvironments. / Schiller, Herbert B; Hermann, Michaela-Rosemarie; Polleux, Julien; Vignaud, Timothée; Zanivan, Sara; Friedel, Caroline C; Sun, Zhiqi; Raducanu, Aurelia; Gottschalk, Kay-E; Théry, Manuel; Mann, Matthias; Fässler, Reinhard.

    In: Nature Cell Biology, Vol. 15, No. 6, 06.2013, p. 625-36.

    Research output: Contribution to journalJournal articleResearch

  17. The chromodomain helicase Chd4 is required for Polycomb-mediated inhibition of astroglial differentiation. / Sparmann, Anke; Xie, Yunli; Verhoeven, Els; Vermeulen, Michiel; Lancini, Cesare; Gargiulo, Gaetano; Hulsman, Danielle; Mann, Matthias; Knoblich, Juergen A; van Lohuizen, Maarten.

    In: E M B O Journal, Vol. 32, No. 11, 29.05.2013, p. 1598-612.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Stabilization of integrin-linked kinase by the Hsp90-CHIP axis impacts cellular force generation, migration and the fibrotic response. / Radovanac, Korana; Morgner, Jessica; Schulz, Jan-Niklas; Blumbach, Katrin; Patterson, Cam; Geiger, Tamar; Mann, Matthias; Krieg, Thomas; Eckes, Beate; Fässler, Reinhard; Wickström, Sara A.

    In: E M B O Journal, Vol. 32, No. 10, 15.05.2013, p. 1409-24.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. A SILAC-based approach identifies substrates of caspase-dependent cleavage upon TRAIL-induced apoptosis. / Stoehr, Gabriele; Schaab, Christoph; Graumann, Johannes; Mann, Matthias.

    In: Molecular & Cellular Proteomics, Vol. 12, No. 5, 05.2013, p. 1436-50.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Protein correlation profiles identify lipid droplet proteins with high confidence. / Krahmer, Natalie; Hilger, Maximiliane; Kory, Nora; Wilfling, Florian; Stoehr, Gabriele; Mann, Matthias; Farese, Robert V; Walther, Tobias C.

    In: Molecular & Cellular Proteomics, Vol. 12, No. 5, 05.2013, p. 1115-26.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Direct proteomic quantification of the secretome of activated immune cells. / Meissner, Felix; Scheltema, Richard A; Mollenkopf, Hans-Joachim; Mann, Matthias.

    In: Science (New York, N.Y.), Vol. 340, No. 6131, 26.04.2013, p. 475-8.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    In Vivo SILAC-Based Proteomics Reveals Phosphoproteome Changes during Mouse Skin Carcinogenesis. / Zanivan, S.; Meves, A.; Behrendt, K.; Schoof, Erwin; Neilson, L.J.; Cox, J.; Tang, H.R.; Kalna, G.; van Ree, J.H.; van Deursen, J.M.; Trempus, C.S.; Machesky, L.M.; Linding, Rune; Wickström, S.A.; Fässler, R.; Mann, M.

    In: Cell Reports, Vol. 3, No. 2, 21.02.2013, p. 552-566.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    The Coming Age of Complete, Accurate, and Ubiquitous Proteomes. / Mann, M.; Kulak, N.A.; Nagaraj, N.; Cox, J.

    In: Molecular Cell, Vol. 49, No. 4, 21.02.2013, p. 583-590.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. A systematic mammalian genetic interaction map reveals pathways underlying ricin susceptibility. / Bassik, Michael C; Kampmann, Martin; Lebbink, Robert Jan; Wang, Shuyi; Hein, Marco Y; Poser, Ina; Weibezahn, Jimena; Horlbeck, Max A; Chen, Siyuan; Mann, Matthias; Hyman, Anthony A; Leproust, Emily M; McManus, Michael T; Weissman, Jonathan S.

    In: Cell, Vol. 152, No. 4, 14.02.2013, p. 909-22.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Proteomic and genetic analyses demonstrate that Plasmodium berghei blood stages export a large and diverse repertoire of proteins. / Pasini, Erica M; Braks, Joanna A; Fonager, Jannik; Klop, Onny; Aime, Elena; Spaccapelo, Roberta; Otto, Thomas D; Berriman, Matt; Hiss, Jan A; Thomas, Alan W; Mann, Matthias; Janse, Chris J; Kocken, Clemens H M; Franke-Fayard, Blandine.

    In: Molecular & Cellular Proteomics, Vol. 12, No. 2, 02.2013, p. 426-48.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Phosphorylation Variation during the Cell Cycle Scales with Structural Propensities of Proteins. / Tyanova, S.; Frishman, D.; Cox, J.; Mann, M.; Olsen, Jesper Velgaard.

    In: P L o S Computational Biology (Online), Vol. 9, No. 1, 10.01.2013, p. e1002842.

    Research output: Contribution to journalJournal articleResearchpeer-review

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