Albin Gustav Sandelin

Albin Gustav Sandelin

Professor


  1. 2019
  2. Published

    A step-by-step guide to analyzing CAGE data using R/Bioconductor. / Thodberg, Malte; Sandelin, Albin.

    In: F1000Research, Vol. 8, 886, 18.06.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. E-pub ahead of print

    IsoformSwitchAnalyzeR : Analysis of changes in genome-wide patterns of alternative splicing and its functional consequences. / Vitting-Seerup, Kristoffer; Sandelin, Albin.

    In: Bioinformatics (Online), 15.04.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Comprehensive profiling of the fission yeast transcription start site activity during stress and media response. / Thodberg, Malte; Thieffry, Axel; Bornholdt, Jette; Boyd, Mette; Holmberg, Christian; Azad, Ajuna; Workman, Christopher T; Chen, Yun; Ekwall, Karl; Nielsen, Olaf; Sandelin, Albin.

    In: Nucleic Acids Research, Vol. 47, No. 4, 28.02.2019, p. 1671-1691.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells. / Agrawal-Singh, Shuchi; Lerdrup, Mads; Gomes, Ana-Luisa R.; van de Werken, Harmen J. G.; Johansen, Jens Vilstrup; Andersson, Robin; Sandelin, Albin; Helin, Kristian; Hansen, Klaus.

    In: eLife, Vol. 8, e40364, 2019, p. 1-32.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. 2018
  7. Published

    Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies. / Boyd, Mette; Thodberg, Malte; Vitezic, Morana; Lange, Jette Bornholdt; Vitting-Seerup, Kristoffer; Chen, Yun; Coskun, Mehmet; Li, Yuan; Lo, Bobby Zhao Sheng; Klausen, Pia; Schweiger, Pawel; Pedersen, Anders Gorm; Rapin, Nicolas Philippe Jean-Pierre; Skovgaard, Kerstin; Dahlgaard, Katja; Andersson, Robin; Terkelsen, Thilde Bagger; Lilje, Berit; Troelsen, Jesper Thorvald; Petersen, Andreas Munk; Jensen, Kim Bak; Gögenur, Ismail; Thielsen, Peter; Seidelin, Jakob Benedict; Nielsen, Ole Haagen; Bjerrum, Jacob Tveiten; Sandelin, Albin Gustav.

    In: Nature Communications, Vol. 9, 1661, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    JASPAR 2018 : update of the open-access database of transcription factor binding profiles and its web framework. / Khan, Aziz; Fornes, Oriol; Stigliani, Arnaud; Gheorghe, Marius; Castro-Mondragon, Jaime A.; van der Lee, Robin; Bessy, Adrien; Chèneby, Jeanne; Kulkarni, Shubhada R.; Tan, Ge; Baranasic, Damir; Arenillas, David J.; Sandelin, Albin Gustav; Vandepoele, Klaas; Lenhard, Boris; Ballester, Benoît; Wasserman, Wyeth W.; Parcy, François; Mathelier, Anthony.

    In: Nucleic Acids Research, Vol. 46, No. D1, gkx1126, 2018, p. D260-D266.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease. / Baillie, J. Kenneth; Bretherick, Andrew; Haley, Christopher S.; Clohisey, Sara; Gray, Alan; Neyton, Lucile P. A.; Barrett, Jeffrey; Stahl, Eli A.; Tenesa, Albert; Andersson, Robin; Brown, J. Ben; Faulkner, Geoffrey J.; Lizio, Marina; Schaefer, Ulf; Daub, Carsten; Itoh, Masayoshi; Kondo, Naoto; Lassmann, Timo; Kawai, Jun; Mole, Damian; Bajic, Vladimir B.; Heutink, Peter; Rehli, Michael; Kawaji, Hideya; Sandelin, Albin Gustav; Suzuki, Harukazu; Satsangi, Jack; Wells, Christine A.; Hacohen, Nir; Freeman, Thomas C.; Hayashizaki, Yoshihide; Carninci, Piero; Forrest, Alistair R. R.; Hume, David A.

    In: PLoS Computational Biology, Vol. 14, No. 3, e1005934, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    The RNA exosome contributes to gene expression regulation during stem cell differentiation. / Llinares, Marta Lloret; Karadoulama, Evdoxia; Chen, Yun; Wojenski, Luke A; Villafano, Geno J; Bornholdt, Jette; Andersson, Robin; Core, Leighton; Sandelin, Albin; Jensen, Torben Heick.

    In: Nucleic Acids Research, Vol. 46, No. 21, 2018, p. 11502-11513.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. 2017
  12. Published

    The landscape of isoform switches in human cancers. / Vitting-Seerup, Kristoffer; Sandelin, Albin Gustav.

    In: Molecular Cancer Research, Vol. 15, No. 9, 09.2017, p. 1206-1220.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    An integrated expression atlas of miRNAs and their promoters in human and mouse. / de Rie, Derek; Abugessaisa, Imad; Alam, Tanvir; Arner, Erik; Arner, Peter; Ashoor, Haitham; Åström, Gaby; Babina, Magda; Bertin, Nicolas; Burroughs, A. Maxwell; Carlisle, Ailsa J.; Daub, Carsten O.; Detmar, Michael; Deviatiiarov, Ruslan; Fort, Alexandre; Gebhard, Claudia; Goldowitz, Daniel; Guhl, Sven; Ha, Thomas J.; Harshbarger, Jayson; Hasegawa, Akira; Hashimoto, Kosuke; Herlyn, Meenhard; Heutink, Peter; Hitchens, Kelly J.; Hon, Chung Chau; Huang, Edward; Ishizu, Yuri; Kai, Chieko; Kasukawa, Takeya; Klinken, Peter; Lassmann, Timo; Lecellier, Charles-Henri; Lee, Weonju; Lizio, Marina; Makeev, Vsevolod; Mathelier, Anthony; Medvedeva, Yulia A.; Mejhert, Niklas; Mungall, Christopher J.; Noma, Shohei; Ohshima, Mitsuhiro; Okada-Hatakeyama, Mariko; Persson, Helena; Rizzu, Patrizia; Roudnicky, Filip; Sætrom, Pål; Sato, Hiroki; Vitting-Seerup, Kristoffer; Sandelin, Albin Gustav; FANTOM Consortium.

    In: Nature Biotechnology, Vol. 35, No. 9, 21.08.2017, p. 872-878.

    Research output: Contribution to journalJournal articleResearchpeer-review

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