A Method to Estimate the Size and Characteristics of HIV-positive Populations Using an Individual-based Stochastic Simulation Model
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A Method to Estimate the Size and Characteristics of HIV-positive Populations Using an Individual-based Stochastic Simulation Model. / Nakagawa, Fumiyo; van Sighem, Ard; Thiebaut, Rodolphe; Smith, Colette; Ratmann, Oliver; Cambiano, Valentina; Albert, Jan; Amato-Gauci, Andrew; Bezemer, Daniela; Campbell, Colin; Commenges, Daniel; Donoghoe, Martin; Ford, Deborah; Kouyos, Roger; Lodwick, Rebecca; Lundgren, Jens; Pantazis, Nikos; Pharris, Anastasia; Quinten, Chantal; Thorne, Claire; Touloumi, Giota; Delpech, Valerie; Phillips, Andrew; SSOPHIE project working group in EuroCoord.
In: Epidemiology, Vol. 27, No. 2, 03.2016, p. 247-256.Research output: Contribution to journal › Journal article › Research › peer-review
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TY - JOUR
T1 - A Method to Estimate the Size and Characteristics of HIV-positive Populations Using an Individual-based Stochastic Simulation Model
AU - Nakagawa, Fumiyo
AU - van Sighem, Ard
AU - Thiebaut, Rodolphe
AU - Smith, Colette
AU - Ratmann, Oliver
AU - Cambiano, Valentina
AU - Albert, Jan
AU - Amato-Gauci, Andrew
AU - Bezemer, Daniela
AU - Campbell, Colin
AU - Commenges, Daniel
AU - Donoghoe, Martin
AU - Ford, Deborah
AU - Kouyos, Roger
AU - Lodwick, Rebecca
AU - Lundgren, Jens
AU - Pantazis, Nikos
AU - Pharris, Anastasia
AU - Quinten, Chantal
AU - Thorne, Claire
AU - Touloumi, Giota
AU - Delpech, Valerie
AU - Phillips, Andrew
AU - SSOPHIE project working group in EuroCoord
N1 - Erratum In the March 2016 issue of EPIDEMIOLOGY in the article by Nakagawa et al., “A Method to Estimate the Size and Characteristics of HIV-positive Populations Using an Individual-based Stochastic Simulation Model,” the Open Access footnote should have read: “This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.” Epidemiology. 27(3):e24, May 2016.
PY - 2016/3
Y1 - 2016/3
N2 - It is important not only to collect epidemiologic data on HIV but to also fully utilize such information to understand the epidemic over time and to help inform and monitor the impact of policies and interventions. We describe and apply a novel method to estimate the size and characteristics of HIV-positive populations. The method was applied to data on men who have sex with men living in the UK and to a pseudo dataset to assess performance for different data availability. The individual-based simulation model was calibrated using an approximate Bayesian computation-based approach. In 2013, 48,310 (90% plausibility range: 39,900-45,560) men who have sex with men were estimated to be living with HIV in the UK, of whom 10,400 (6,160-17,350) were undiagnosed. There were an estimated 3,210 (1,730-5,350) infections per year on average between 2010 and 2013. Sixty-two percent of the total HIV-positive population are thought to have viral load <500 copies/ml. In the pseudo-epidemic example, HIV estimates have narrower plausibility ranges and are closer to the true number, the greater the data availability to calibrate the model. We demonstrate that our method can be applied to settings with less data, however plausibility ranges for estimates will be wider to reflect greater uncertainty of the data used to fit the model.
AB - It is important not only to collect epidemiologic data on HIV but to also fully utilize such information to understand the epidemic over time and to help inform and monitor the impact of policies and interventions. We describe and apply a novel method to estimate the size and characteristics of HIV-positive populations. The method was applied to data on men who have sex with men living in the UK and to a pseudo dataset to assess performance for different data availability. The individual-based simulation model was calibrated using an approximate Bayesian computation-based approach. In 2013, 48,310 (90% plausibility range: 39,900-45,560) men who have sex with men were estimated to be living with HIV in the UK, of whom 10,400 (6,160-17,350) were undiagnosed. There were an estimated 3,210 (1,730-5,350) infections per year on average between 2010 and 2013. Sixty-two percent of the total HIV-positive population are thought to have viral load <500 copies/ml. In the pseudo-epidemic example, HIV estimates have narrower plausibility ranges and are closer to the true number, the greater the data availability to calibrate the model. We demonstrate that our method can be applied to settings with less data, however plausibility ranges for estimates will be wider to reflect greater uncertainty of the data used to fit the model.
U2 - 10.1097/EDE.0000000000000423
DO - 10.1097/EDE.0000000000000423
M3 - Journal article
C2 - 26605814
VL - 27
SP - 247
EP - 256
JO - Epidemiology
JF - Epidemiology
SN - 1044-3983
IS - 2
ER -
ID: 171553523