PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites

Research output: Contribution to journalJournal articlepeer-review

PHOSIDA http://www.phosida.com, a phosphorylation site database, integrates thousands of high-confidence in vivo phosphosites identified by mass spectrometry-based proteomics in various species. For each phosphosite, PHOSIDA lists matching kinase motifs, predicted secondary structures, conservation patterns, and its dynamic regulation upon stimulus. Using support vector machines, PHOSIDA also predicts phosphosites.
Original languageEnglish
JournalGenome Biology
Volume8
Issue number11
Pages (from-to)R250
ISSN1465-6906
DOIs
Publication statusPublished - 2007
Externally publishedYes

Bibliographical note

Keywords: Databases, Protein; Evolution; Phosphoproteins; Phosphorylation; Proteome; Software

ID: 46461489