Epitope length variants balance protective immune responses and viral escape in HIV-1 infection

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  • Phillip Pymm
  • Stefan Tenzer
  • Edmund Wee
  • Mirjana Weimershaus
  • Anne Burgevin
  • Simon Kollnberger
  • Gerstoft, Jan
  • Tracy M. Josephs
  • Kristin Ladell
  • James E. McLaren
  • Victor Appay
  • David A. Price
  • Fugger, Lars
  • John I. Bell
  • Hansjörg Schild
  • Peter van Endert
  • Maria Harkiolaki
  • Astrid K.N. Iversen

Cytotoxic T lymphocyte (CTL) and natural killer (NK) cell responses to a single optimal 10-mer epitope (KK10) in the human immunodeficiency virus type-1 (HIV-1) protein p24Gag are associated with enhanced immune control in patients expressing human leukocyte antigen (HLA)-B27:05. We find that proteasomal activity generates multiple length variants of KK10 (4–14 amino acids), which bind TAP and HLA-B27:05. However, only epitope forms ≥8 amino acids evoke peptide length-specific and cross-reactive CTL responses. Structural analyses reveal that all epitope forms bind HLA-B27:05 via a conserved N-terminal motif, and competition experiments show that the truncated epitope forms outcompete immunogenic epitope forms for binding to HLA-B27:05. Common viral escape mutations abolish (L136M) or impair (R132K) production of KK10 and longer epitope forms. Peptide length influences how well the inhibitory NK cell receptor KIR3DL1 binds HLA-B27:05 peptide complexes and how intraepitope mutations affect this interaction. These results identify a viral escape mechanism from CTL and NK responses based on differential antigen processing and peptide competition.

Original languageEnglish
Article number110449
JournalCell Reports
Volume38
Issue number9
Number of pages22
ISSN2211-1247
DOIs
Publication statusPublished - 2022

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© 2022 The Author(s)

    Research areas

  • crystal structures, cytotoxic T lymphocytes, differential antigen processing, HIV-1, HLA-B27:05, immune-response inhibition, KIR3DL1, natural killer cells, peptide competition, viral escape

ID: 314279016