Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. / Tandrup, Tobias; Muderspach, Sebastian J.; Banerjee, Sanchari; Santoni, Gianluca; Ipsen, Johan O.; Hernandez-Rollan, Cristina; Norholm, Morten H. H.; Johansen, Katja S.; Meilleur, Flora; Lo Leggio, Leila.

In: IUCrJ, Vol. 9, No. 5, 09.2022, p. 666-681.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Tandrup, T, Muderspach, SJ, Banerjee, S, Santoni, G, Ipsen, JO, Hernandez-Rollan, C, Norholm, MHH, Johansen, KS, Meilleur, F & Lo Leggio, L 2022, 'Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding', IUCrJ, vol. 9, no. 5, pp. 666-681. https://doi.org/10.1107/S2052252522007175

APA

Tandrup, T., Muderspach, S. J., Banerjee, S., Santoni, G., Ipsen, J. O., Hernandez-Rollan, C., Norholm, M. H. H., Johansen, K. S., Meilleur, F., & Lo Leggio, L. (2022). Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. IUCrJ, 9(5), 666-681. https://doi.org/10.1107/S2052252522007175

Vancouver

Tandrup T, Muderspach SJ, Banerjee S, Santoni G, Ipsen JO, Hernandez-Rollan C et al. Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. IUCrJ. 2022 Sep;9(5):666-681. https://doi.org/10.1107/S2052252522007175

Author

Tandrup, Tobias ; Muderspach, Sebastian J. ; Banerjee, Sanchari ; Santoni, Gianluca ; Ipsen, Johan O. ; Hernandez-Rollan, Cristina ; Norholm, Morten H. H. ; Johansen, Katja S. ; Meilleur, Flora ; Lo Leggio, Leila. / Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. In: IUCrJ. 2022 ; Vol. 9, No. 5. pp. 666-681.

Bibtex

@article{70f8c5d04df9476886866bfb9e5cd66a,
title = "Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding",
abstract = "The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu2+ to Cu+. Here we have used a systematic diffraction data collection method to monitor structural changes in two AA9 LPMOs, one from Lentinus similis (LsAA9_A) and one from Thermoascus aurantiacus (TaAA9_A), as the active-site Cu is photoreduced in the X-ray beam. For LsAA9_A, the protein produced in two different recombinant systems was crystallized to probe the effect of post-translational modifications and different crystallization conditions on the active site and metal photoreduction. We can recommend that crystallographic studies of AA9 LPMOs wishing to address the Cu2+ form use a total X-ray dose below 3 x 10(4) Gy, while the Cu+ form can be attained using 1 x 10(6) Gy. In all cases, we observe the transition from a hexacoordinated Cu site with two solvent-facing ligands to a T-shaped geometry with no exogenous ligands, and a clear increase of the theta(2) parameter and a decrease of the theta(3) parameter by averages of 9.2 degrees and 8.4 degrees, respectively, but also a slight increase in theta(T). Thus, the theta(2) and theta(3) parameters are helpful diagnostics for the oxidation state of the metal in a His-brace protein. On binding of cello-oligosaccharides to LsAA9_A, regardless of the production source, the theta(T) parameter increases, making the Cu site less planar, while the active-site Tyr-Cu distance decreases reproducibly for the Cu2+ form. Thus, the theta(T) increase found on copper reduction may bring LsAA9_A closer to an oligosaccharide-bound state and contribute to the observed higher affinity of reduced LsAA9_A for cellulosic substrates.",
keywords = "MACROMOLECULAR CRYSTALLOGRAPHY EXPERIMENTS, PROTEIN CRYSTALLOGRAPHY, SERIAL SYNCHROTRON, METAL, CELLULOSE, MECHANISM, DEGRADATION, ACTIVATION, INSIGHTS, CRYSTALS",
author = "Tobias Tandrup and Muderspach, {Sebastian J.} and Sanchari Banerjee and Gianluca Santoni and Ipsen, {Johan O.} and Cristina Hernandez-Rollan and Norholm, {Morten H. H.} and Johansen, {Katja S.} and Flora Meilleur and {Lo Leggio}, Leila",
year = "2022",
month = sep,
doi = "10.1107/S2052252522007175",
language = "English",
volume = "9",
pages = "666--681",
journal = "I U Cr J",
issn = "2052-2525",
publisher = "International Union of Crystallography",
number = "5",

}

RIS

TY - JOUR

T1 - Changes in active-site geometry on X-ray photo-reduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding

AU - Tandrup, Tobias

AU - Muderspach, Sebastian J.

AU - Banerjee, Sanchari

AU - Santoni, Gianluca

AU - Ipsen, Johan O.

AU - Hernandez-Rollan, Cristina

AU - Norholm, Morten H. H.

AU - Johansen, Katja S.

AU - Meilleur, Flora

AU - Lo Leggio, Leila

PY - 2022/9

Y1 - 2022/9

N2 - The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu2+ to Cu+. Here we have used a systematic diffraction data collection method to monitor structural changes in two AA9 LPMOs, one from Lentinus similis (LsAA9_A) and one from Thermoascus aurantiacus (TaAA9_A), as the active-site Cu is photoreduced in the X-ray beam. For LsAA9_A, the protein produced in two different recombinant systems was crystallized to probe the effect of post-translational modifications and different crystallization conditions on the active site and metal photoreduction. We can recommend that crystallographic studies of AA9 LPMOs wishing to address the Cu2+ form use a total X-ray dose below 3 x 10(4) Gy, while the Cu+ form can be attained using 1 x 10(6) Gy. In all cases, we observe the transition from a hexacoordinated Cu site with two solvent-facing ligands to a T-shaped geometry with no exogenous ligands, and a clear increase of the theta(2) parameter and a decrease of the theta(3) parameter by averages of 9.2 degrees and 8.4 degrees, respectively, but also a slight increase in theta(T). Thus, the theta(2) and theta(3) parameters are helpful diagnostics for the oxidation state of the metal in a His-brace protein. On binding of cello-oligosaccharides to LsAA9_A, regardless of the production source, the theta(T) parameter increases, making the Cu site less planar, while the active-site Tyr-Cu distance decreases reproducibly for the Cu2+ form. Thus, the theta(T) increase found on copper reduction may bring LsAA9_A closer to an oligosaccharide-bound state and contribute to the observed higher affinity of reduced LsAA9_A for cellulosic substrates.

AB - The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu2+ to Cu+. Here we have used a systematic diffraction data collection method to monitor structural changes in two AA9 LPMOs, one from Lentinus similis (LsAA9_A) and one from Thermoascus aurantiacus (TaAA9_A), as the active-site Cu is photoreduced in the X-ray beam. For LsAA9_A, the protein produced in two different recombinant systems was crystallized to probe the effect of post-translational modifications and different crystallization conditions on the active site and metal photoreduction. We can recommend that crystallographic studies of AA9 LPMOs wishing to address the Cu2+ form use a total X-ray dose below 3 x 10(4) Gy, while the Cu+ form can be attained using 1 x 10(6) Gy. In all cases, we observe the transition from a hexacoordinated Cu site with two solvent-facing ligands to a T-shaped geometry with no exogenous ligands, and a clear increase of the theta(2) parameter and a decrease of the theta(3) parameter by averages of 9.2 degrees and 8.4 degrees, respectively, but also a slight increase in theta(T). Thus, the theta(2) and theta(3) parameters are helpful diagnostics for the oxidation state of the metal in a His-brace protein. On binding of cello-oligosaccharides to LsAA9_A, regardless of the production source, the theta(T) parameter increases, making the Cu site less planar, while the active-site Tyr-Cu distance decreases reproducibly for the Cu2+ form. Thus, the theta(T) increase found on copper reduction may bring LsAA9_A closer to an oligosaccharide-bound state and contribute to the observed higher affinity of reduced LsAA9_A for cellulosic substrates.

KW - MACROMOLECULAR CRYSTALLOGRAPHY EXPERIMENTS

KW - PROTEIN CRYSTALLOGRAPHY

KW - SERIAL SYNCHROTRON

KW - METAL

KW - CELLULOSE

KW - MECHANISM

KW - DEGRADATION

KW - ACTIVATION

KW - INSIGHTS

KW - CRYSTALS

U2 - 10.1107/S2052252522007175

DO - 10.1107/S2052252522007175

M3 - Journal article

C2 - 36071795

VL - 9

SP - 666

EP - 681

JO - I U Cr J

JF - I U Cr J

SN - 2052-2525

IS - 5

ER -

ID: 320751482