Susanna Cirera

Susanna Cirera

Associate Professor


  1. 2024
  2. Published

    Association of serum and fecal microRNA profiles in healthy cats and cats with gastrointestinal cancer or chronic inflammatory enteropathy

    Lyngby, Janne Graarup, Brogaard, L., Kristensen, Annemarie T., Fredholm, Merete, Bjørnvad, Charlotte Reinhard, Salavati Schmitz, S., Skancke, E., Morris, J., Dupont, Nana, Argyle, D., Sánchez, S., Spohr, A., Graarup-Hansen, K., Nielsen, Lise Nikolic & Cirera, Susanna, 2024, In: Journal of Veterinary Internal Medicine. 38, 1, p. 741 1 p., ESCG-O-3.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  3. Published

    High fat diet is associated with gut microbiota dysbiosis and decreased gut microbial derived metabolites related to metabolic health in young Göttingen Minipigs

    Lützhøft, Ditte Olsen, Bækgård, Cecilie, Wimborne, E., Straarup, E. M., Pedersen, K. M., Swann, J. R., Pedersen, H. D., Kristensen, K., Morgills, L., Nielsen, Dennis Sandris, Hansen, Axel Kornerup, Bracken, M. K., Cirera, Susanna & Christoffersen, B. Ø., 2024, In: PLoS ONE. 19, 3, 27 p., e0298602.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published
  5. 2023
  6. Published

    A molecular target of oxantel in whipworms

    Hansen, Tina Vicky Alstrup, Klærke, Dan Arne, Cirera, Susanna, Callø, Kirstine, Courtot, E., Grencis, R. K., Issouf, M., Martin, R., Neveu, C. & Charvet, C., 2023.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  7. Published

    Alteration of microglial metabolism and inflammatory profile contributes to neurotoxicity in a hiPSC-derived microglia model of frontotemporal dementia 3

    Haukedal, H., Syshøj Lorenzen, S., Westi, Emil Winther, Corsi, G., Gadekar, V. P., McQuade, A., Davtyan, H., Doncheva, Nadezhda Tsankova, Schmid, B., Chandrasekaran, Abinaya, Seemann, Ernst Stefan, Cirera, Susanna, Blurton-Jones, M., Meyer, M., Gorodkin, Jan, Aldana, Blanca & Freude, Kristine, 2023, In: Brain, Behavior, and Immunity. 113, p. 353-373

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Association of serum and fecal microRNA profiles in cats with gastrointestinal cancer and chronic inflammatory enteropathy

    Brogaard, L., Lyngby, Janne Graarup, Kristensen, Annemarie T., Fredholm, Merete, Bjørnvad, Charlotte Reinhard, Salavati Schmitz, S., Skancke, E., Morris, J. S., Dupont, Nana, Argyle, D., Sánchez, A., Spohr, A., Graarup-Hansen, K., Nielsen, Lise Nikolic & Cirera, Susanna, 2023, In: Journal of Veterinary Internal Medicine. 37, 5, p. 1738-1749

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Functional and morphological renal changes in a Göttingen Minipig model of obesity-related and diabetic nephropathy

    Christoffersen, B. Ø., Kristensen, C. A., Lindgaard, R., Kirk, R. K., Viuff, B. M., Kvist, P. H., Pedersen, H. D., Ludvigsen, T. P., Skovgaard, T., Fels, J. J., Martinussen, Torben, Christiansen, L. B., Cirera, Susanna & Olsen, Lisbeth Høier, 2023, In: Scientific Reports. 13, 13 p., 6017.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Golgi fragmentation: One of the earliest organelle phenotypes in Alzheimer's disease neurons

    Haukedal, H., Corsi, G. I., Gadekar, V. P., Doncheva, N. T., Kedia, S., de Haan, N., Chandrasekaran, A., Jensen, P., Schiønning, P., Vallin, S., Marlet, F. R., Poon, A., Pires, C., Agha, F. K., Wandall, H. H., Cirera, S., Simonsen, A. H., Nielsen, T. T., Nielsen, J. E., Hyttel, P. & 7 others, Muddashetty, R., Aldana, Blanca, Gorodkin, Jan, Nair, D., Meyer, M., Larsen, M. R. & Freude, Kristine, 2023, In: Frontiers in Neuroscience. 17, 17 p., 1120086.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    MicroRNA profiling of cerebrospinal fluid from dogs with steroid responsive meningitis-arteritis and meningoencephalitis of unknown origin

    Mármol-Sánchez, E., Heidemann, Pernille Lindholm, Gredal, Hanne Birgit & Cirera, Susanna, 2023, In: Frontiers in Veterinary Science. 10, 1144084.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. 2022
  13. Published

    Analysis of merged transcriptomic and genomic datasets to identify genes and pathways underlying residual feed intake in growing pigs

    Ibragimov, Emil, Pedersen, Anni Øyan, Xiao, L., Cirera, Susanna, Fredholm, Merete & Karlskov-Mortensen, Peter, 2022, In: Scientific Reports. 12, 21946.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Are microRNAs possible biomarkers of bloodworm infection in horses?

    Nielsen, Katrine Toft, Ripley, N., Fromm, B., Cirera, Susanna, Nielsen, M. K., Nielsen, Lise Nikolic, Nejsum, P., Thamsborg, Stig Milan & Pihl, Tina, 2022.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  15. Published

    Association of fecal and serum microRNA profiles with gastrointestinal cancer and chronic inflammatory enteropathy in dogs

    Lyngby, Janne Graarup, Gòdia, M., Brogaard, L., Kristensen, Annemarie T., Fredholm, Merete, Skancke, E., Morris, J., Dupont, Nana, Salavati Schmitz, S., Argyle, D., Sánchez, A., Bjørnvad, Charlotte Reinhard, Cirera, Susanna & Nielsen, Lise Nikolic, 2022, In: Journal of Veterinary Internal Medicine. 36, 6, p. 1989-2001

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Functional and morphological renal changes in a Gottingen Minipig model of obesity-related and diabetic nephropathy

    Christoffersen, B. O., Kristensen, C. A., Lindgaard, R., Kirk, R. K., Viuff, B. M., Kvist, P. H., Pedersen, H. D., Ludvigsen, T. P., Skovgaard, T., Fels, J. J., Martinussen, Torben, Christiansen, L. B., Cirera, Susanna & Olsen, Lisbeth Høier, 2022, In: Diabetologia. 65, Suppl. 1, p. S397-S398 2 p.

    Research output: Contribution to journalConference abstract in journalResearch

  17. Published

    Marked gut microbiota dysbiosis and increased imidazole propionate are associated with a NASH Göttingen Minipig model

    Lützhøft, Ditte Olsen, Sinioja, T., Christoffersen, B., Jakobsen, Rasmus Riemer, Geng, Dawei, Ahmad, H. F. B., Straarup, E. M., Pedersen, K. M., Kot, Witold, Pedersen, H. D., Cirera, Susanna, Hyötyläinen, T., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2022, In: BMC Microbiology. 22, 1, 287.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Modeling microRNA-driven post-transcriptional regulation using exon–intron split analysis in pigs

    Mármol-Sánchez, E., Cirera, Susanna, Zingaretti, L. M., Jacobsen, M. J., Ramayo-Caldas, Y., Jørgensen, Claus Bøttcher, Fredholm, Merete, Cardoso, T. F., Quintanilla, R. & Amills, M., 2022, In: Animal Genetics. 53, 5, p. 613-626

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Profiling microRNAs from the Equine Bloodworm (Strongylus vulgaris)

    Nielsen, Katrine Toft, Honoré Lytzhøft-Olsen, M. L., Fromm, B., Whitehead, S., Cirera, Susanna, Nielsen, M. K., Nielsen, Lise Nikolic, Nejsum, P., Thamsborg, Stig Milan & Pihl, Tina, 2022.

    Research output: Contribution to conferencePosterResearch

  20. Published

    The Molecular target of oxantel in whipworms

    Hansen, Tina Vicky Alstrup, Klærke, Dan Arne, Cirera, Susanna, Callø, Kirstine, Courtot, E., Grencis, R., Issouf, M., Martin, R., Neveu, C. & Charvet, C., 2022.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  21. Published

    Urinary microRNAome in healthy cats and cats with pyelonephritis or other urological conditions

    Godia, M., Brogaard, L., Marmol-Sanchez, E., Langhorn, Rebecca, Kieler, Ida Nordang, Reezigt, B. J., Nielsen, Lise Nikolic, Jessen, Lisbeth Rem & Cirera, Susanna, 2022, In: PLoS ONE. 17, e0270067.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. 2021
  23. Published

    Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3

    Chandrasekaran, A., Dittlau, K. S., Corsi, G. I., Haukedal, H., Doncheva, N. T., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Zhang, Y., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J. E., Kolko, M., Kobolák, J., Dinnyés, A., Hyttel, P., Palakodeti, D. & 5 others, Gorodkin, Jan, Muddashetty, R. S., Meyer, M., Aldana, Blanca & Freude, Kristine, 2021, In: Stem Cell Reports. 16, 11, p. 2736-2751

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Diet-Dependent Changes of the DNA Methylome Using a Göttingen Minipig Model for Obesity

    Feng, Y., Cirera, Susanna, Taşöz, E., Liu, Y., Olsen, Lisbeth Høier, Christoffersen, B. Ø., Pedersen, H. D., Ludvigsen, T. P., Kirk, R. K., Schumacher-Petersen, Camilla, Deng, Y., Fredholm, Merete & Gao, Fei, 2021, In: Frontiers in Genetics. 12, 632859.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    The narrow-spectrum anthelmintic oxantel is a potent agonist of a novel acetylcholine receptor subtype in whipworms

    Hansen, Tina Vicky Alstrup, Cirera, Susanna, Neveu, C., Courtot, E., Charvet, C. L., Callø, Kirstine, Klærke, Dan Arne & Martin, R. J., 2021, In: P L o S Pathogens. 17, 2, 26 p., e1008982.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Unraveling molecular mechanisms involved in the development of leptin resistance using the pig as a model

    Mármol-Sánchez, E., Artman, J. S., Fredholm, Merete & Cirera, Susanna, 2021, In: Animal Genetics. 52, 1, p. 55-65

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. 2020
  28. Published

    Cloning and Expression of an Oxantel Sensitive Homomeric Nicotinic Acetylcholine Receptor of Trichuris, the Tsu-ACR-16-like receptor

    Hansen, Tina Vicky Alstrup, Klærke, Dan Arne, Cirera, Susanna, Neveu, C., Callø, Kirstine & Martin, R., 2020.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  29. Published

    Differential microRNA expression-profiles in feces and serum of dogs with chronic inflammatory enteropathy and with gastrointestinal disease

    Lyngby, Janne Graarup, Godia, M., Kristensen, Annemarie T., Fredholm, Merete, Skancke, E., Salvati, S., Morris, J. S., Argyle, D., Bjørnvad, Charlotte Reinhard, Sánchez, A., Dupont, Nana, Cirera, Susanna & Nielsen, Lise Nikolic, 2020.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  30. Published

    Discovery and annotation of novel microRNAs in the porcine genome by using a semi-supervised transductive learning approach

    Mármol-Sánchez, E., Cirera, Susanna, Quintanilla, R., Pla, A. & Amills, M., 2020, In: Genomics. 112, 3, p. 2107-2118

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Fecal bile acid profiles in cats with chronic enteropathy, intestinal neoplasia, and in heathy control cats

    Lyngby, Janne Graarup, Hovland, A., Due, C., Cirera, Susanna, Lidbury, J., Steiner, J., Sudolski, J., Bjørnvad, Charlotte Reinhard & Nielsen, Lise Nikolic, 2020.

    Research output: Contribution to conferencePosterResearch

  32. Published

    Mutation in FTD3 CHMP2B causes impaired autography and distorted energy metabolism cumulating in reactive astrocyte phenotypes

    Chandrasekaran, A., Dittlau, K. S., Corsi, G., Haukedal, H., Doncheva, N. T., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J., Kolko, M., Kobolak, J., Dinnyes, A., Hyttel, P., Palakodeti, D., Gorodkin, J. & 4 others, Muddashetty, R., Meyer, M., Aldana, Blanca & Freude, Kristine, 2020.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  33. Published

    Mutations in FTD3 CHMP2B causes impaired autophagy and distorted energy metabolism cumulating in reactive astrocyte phenotypes

    Chandrasekaran, A., Dittlau, K. S., Corsi, G., Doncheva, N. T., Haukedal, H., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J., Kolko, M., Kobolak, J., Dinnyes, A., Hyttel, P., Palakodeti, D., Gorodkin, J. & 4 others, Muddashetty, R., Meyer, M., Aldana, Blanca & Freude, Kristine, 2020.

    Research output: Contribution to conferencePosterResearch

  34. Published

    NASH-inducing Diets in Göttingen Minipigs

    Pedersen, H. D., Galsgaard, E. D., Christoffersen, B., Cirera, Susanna, Holst, D., Fredholm, Merete & Latta, M., 2020, In: Journal of Clinical and Experimental Hepatology. 10, 3, p. 211-221

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Stability and profiling of urinary microRNAs in healthy cats and cats with pyelonephritis or other urological conditions

    Jessen, Lisbeth Rem, Nielsen, Lise Nikolic, Kieler, Ida Nordang, Langhorn, Rebecca, Reezigt, B. J. & Cirera, Susanna, 2020, In: Journal of Veterinary Internal Medicine. 34, 1, p. 166-175

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    The expression signatures in liver and adipose tissue from obese Göttingen Minipigs reveal a predisposition for healthy fat accumulation

    Cirera, Susanna, Taşöz, E., Juul Jacobsen, M., Schumacher-Petersen, Camilla, Østergaard Christoffersen, B., Kaae Kirk, R., Pagh Ludvigsen, T., Hvid, H., Duelund Pedersen, H., Olsen, Lisbeth Høier & Fredholm, Merete, 2020, In: Nutrition and Diabetes. 10, 1, 12 p., 9.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. 2019
  38. Published

    AU Content in the MicroRNA Sequence Influences its Stability after Heat Treatment

    López, A. G., Brogaard, L., Heegaard, P. M. H., Cirera, Susanna & Skovgaard, K., 2019, In: MicroRNA. 8, 3, p. 216-222 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Challenges and standardization of microRNA profiling in serum and cerebrospinal fluid in dogs suffering from non-infectious inflammatory CNS disease

    Cirera, Susanna, Andersen-Ranberg, Emilie Ulrikka, Langkilde, S., Aaquist, M. & Gredal, Hanne Birgit, 2019, In: Acta Veterinaria Scandinavica. 61, 1, 6 p., 57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Epigenetic and Transcriptomic Characterization of Pure Adipocyte Fractions From Obese Pigs Identifies Candidate Pathways Controlling Metabolism

    Jacobsen, M. J., Havgaard, Jakob Hull, Anthon, Christian, Mentzel, Caroline M. Junker, Cirera, Susanna, Krogh, P. M., Pundhir, Sachin, Karlskov-Mortensen, Peter, Bruun, C. S., Lesnik, P., Guerin, M., Gorodkin, Jan, Jørgensen, Claus Bøttcher, Fredholm, Merete & Barrès, Romain, 2019, In: Frontiers in Genetics. 10, 13 p., 1268.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Evaluation of fecal microRNA stability in healthy cats

    Lyngby, Janne Graarup, Kristensen, Annemarie T., Fredholm, Merete, Nielsen, Lise Nikolic & Cirera, Susanna, 2019, In: Veterinary Clinical Pathology. 48, 3, p. 455-460 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. 2018
  43. Published

    Evaluation of microRNA stability in feces from healthy dogs

    Cirera, Susanna, Willumsen, L. M., Johansen, T. T. & Nielsen, Lise Nikolic, Mar 2018, In: Veterinary Clinical Pathology. 47, 1, p. 115-121 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    A targeted genotyping approach enhances identification of variants in taste receptor and appetite/reward genes of potential functional importance for obesity-related porcine traits

    Cirera, Susanna, Clop, A., Jacobsen, M. J., Guerin, M., Lesnik, P., Jørgensen, Claus Bøttcher, Fredholm, Merete & Karlskov-Mortensen, Peter, 2018, In: Animal Genetics. 49, 2, p. 110–118

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Deregulation of obesity-relevant genes is associated with progression in BMI and the amount of adipose tissue in pigs

    Mentzel, Caroline M. Junker, Cardoso, T. F., Pipper, C. B., Jacobsen, M. J., Jørgensen, Claus Bøttcher, Cirera, Susanna & Fredholm, Merete, 2018, In: Molecular Genetics and Genomics. 293, 1, p. 129–136 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. 2017
  47. Published

    Circulating let-7g is down-regulated in Bernese Mountain dogs with disseminated histiocytic sarcoma and carcinomas: a prospective study

    Børresen, Betina, Nielsen, Lise Nikolic, Jessen, Lisbeth Rem, Kristensen, Annemarie T., Fredholm, Merete & Cirera, Susanna, Jun 2017, In: Veterinary and Comparative Oncology. 15, 2, p. 525–533 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Transcriptional immune response in mesenteric lymph nodes in pigs with different levels of resistance to Ascaris suum

    Skallerup, P., Nejsum, P., Cirera, Susanna, Skovgaard, K., Pipper, C. B., Fredholm, Merete, Jørgensen, Claus Bøttcher & Thamsborg, Stig Milan, Mar 2017, In: Acta Parasitologica. 62, 1, p. 141-153 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published
  50. Published

    Evaluation of microRNA stability in plasma and serum from healthy dogs

    Enelund, L., Nielsen, Lise Nikolic & Cirera, Susanna, 2017, In: MicroRNA. 6, 1, p. 42-52 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    FEELnc: A tool for long non-coding RNA annotation and its application to the dog transcriptome

    Wucher, V., Legeai, F., Hédan, B., Rizk, G., Lagoutte, L., Leeb, T., Jagannathan, V., Cadieu, E., David, A., Lohi, H., Cirera Salicio, S., Fredholm, M., Botherel, N., Leegwater, P. A. J., Le Béguec, C., Fieten, H., Johnson, J. J., Alföldi, J., André, C., Lindblad-Toh, K. & 2 others, Hitte, C. & Derrien, T., 2017, In: Nucleic Acids Research. 45, 8, 12 p., e57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Fat and carbohydrate content in the diet induces drastic changes in gene expression in young Göttingen minipigs

    Mentzel, Caroline M. Junker, Figueiredo Cardoso, T., Haagensen, A. M. J., Sørensen, Dorte Bratbo, Fredholm, Merete & Cirera, Susanna, 2017, In: Mammalian Genome. 28, 5-6, p. 166-175 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    Haplotypes on pig chromosome 3 distinguish metabolically healthy from unhealthy obese individuals

    Frederiksen, S. D., Karlskov-Mortensen, Peter, Pant, S. D., Guerin, M., Lesnik, P., Jørgensen, Claus Bøttcher, Cirera, Susanna, Bruun, Camilla Vibeke Sichlau, Mark, T. & Fredholm, Merete, 2017, In: PLoS ONE. 12, 6, 13 p., e0178828.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Systematic in vitro and in vivo characterization of Leukemia-inhibiting factor- and Fibroblast growth factor-derived porcine induced pluripotent stem cells

    Secher, J. O. B., Ceylan, A., Mazzoni, G., Mashayekhi-Nezamabadi, K., Li, T., Muenthaisong, S., Nielsen, T., Li, D., Li, S., Petkov, S. G., Cirera Salicio, S., Luo, Y., Thombs, L., Kadarmideen, H., Dinnyés, A., Bolund, L., Roelen, B. A., Schmidt, M., Callesen, H., Hyttel, P. & 1 others, Freude, Kristine, 2017, In: Molecular Reproduction and Development. 84, 3, p. 229-245

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. 2016
  56. Published

    Joint profiling of miRNAs and mRNAs reveals miRNA mediated gene regulation in the Göttingen minipig obesity model

    Mentzel, Caroline M. Junker, Alkan, F., Keinicke, H., Jacobsen, M. J., Gorodkin, Jan, Fredholm, Merete & Cirera, Susanna, 30 Nov 2016, In: P L o S One. 11, 11, 16 p., e0167285.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Adipocyte gene expression and DNA methylation patterns differ significantly between lean and obese pigs

    Jacobsen, M. J., Havgaard, Jakob Hull, Mentzel, Caroline M. Junker, Sørensen, P. M., Pundhir, Sachin, Anthon, Christian, Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Gorodkin, Jan, Jørgensen, Claus Bøttcher, Barrès, Romain & Fredholm, Merete, 9 Nov 2016, In: Journal of Animal Science. 94, Supplement 4, p. 46-47 2 p., P2019.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  58. Published

    Focus on atherosclerosis and the pig as a model to identify genes affecting cholesterol and other plasma lipid levels.

    Karlskov-Mortensen, Peter, Frederiksen, S. D., Pant, S. D., Cirera, Susanna, Jørgensen, Claus Bøttcher, Bruun, Camilla Vibeke Sichlau, Mark, T. & Fredholm, Merete, 9 Nov 2016, In: Journal of Animal Science. 94, Supplement4, p. 152-152 1 p., P6009.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  59. Published

    The positional identity of iPSC-derived neural progenitor cells along the anterior-posterior axis is controlled in a dosage-dependent manner by bFGF and EGF

    Zhou, S., Ochalek, A., Szczesna, K., Avci, H. X., Kobolak, J., Varga, E., Rasmussen, M., Holst, B., Cirera, Susanna, Hyttel, P., Freude, Kristine & Dinnyes, A., Oct 2016, In: Differentiation. 92, 4, p. 183-194 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. Published

    Hepatic expression of inflammatory genes and microRNAs in pigs with high "cholesteryl ester transfer protein" (CETP) activity

    Cirera, Susanna, Tørsleff, B. C. J., Ritz, C., Fredholm, Merete, Heegaard, P. M. H. & Skovgaard, K., 30 May 2016, In: Mammalian Genome. 27, 9, p. 503-510 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    A large insertion in intron 2 of the TYRP1 gene associated with American Palomino phenotype in American mink

    Cirera, Susanna, Markakis, M. N., Kristensen, Thea, Vissenberg, K., Fredholm, Merete, Christensen, Knud Arnbjerg & Anistoroaei, R. M., Apr 2016, In: Mammalian Genome. 27, 3, p. 135-143 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes

    Clop, A., Sharaf, A., Castelló, A., Ramos-Onsins, S., Cirera, Susanna, Mercadé, A., Derdak, S., Beltran, S., Huisman, A., Fredholm, Merete, van As, P. & Sánchez, A., 2016, In: BMC Genomics. 17, 17 p., 685.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    Neurosphere based differentiation of human iPSC improves astrocyte differentiation

    Zhou, S., Szczesna, K., Ochalek, A., Kobolák, J., Varga, E., Nemes, C., Chandrasekaran, A., Rasmussen, M., Cirera, Susanna, Hyttel, P., Dinnyés, A., Freude, Kristine & Avci, H. X., 2016, In: Stem Cells International. 2016, 15 p., 4937689.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    Physical training and weight loss in dogs lead to transcriptional changes in genes involved in the glucose-transport pathway in muscle and adipose tissues

    Herrera Uribe, J., Vitger, Anne Désiré, Ritz, C., Fredholm, Merete, Bjørnvad, Charlotte Reinhard & Cirera, Susanna, 2016, In: The Veterinary Journal. 208, p. 22-27 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    Transcriptional analysis of porcine intestinal mucosa infected with Salmonella Typhimurium revealed a massive inflammatory response and disruption of bile acid absorption in ileum

    Uribe, J. H., Collado-Romero, M., Zaldívar-López, S., Arce, C., Bautista, R., Carvajal, A., Cirera, Susanna, Claros, M. G. & Garrido, J. J., 2016, In: Veterinary Research. 47, 10 p., 11.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. 2015
  67. Published

    Comparison of American mink embryonic stem and induced pluripotent stem cell transcriptomes

    Menzorov, A. G., Matveeva, N. M., Markakis, M. N., Fishman, V. S., Christensen, Knud Arnbjerg, Khabarova, A. A., Pristyazhnyuk, I. E., Kizilova, E. A., Cirera, Susanna, Anistoroaei, R. M. & Serov, O. L., 16 Dec 2015, In: BMC Genomics. 16 , Suppl. 13, 12 p., 56.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Expression study of GLUT4 translocation-related genes in a porcine pre-diabetic model

    Kristensen, Thea, Fredholm, Merete & Cirera, Susanna, Dec 2015, In: Mammalian Genome. 26, 11, p. 650-657 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    An integrative systems genetics approach reveals potential causal genes and pathways related to obesity

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 20 Oct 2015, In: Genome Medicine. 7, 15 p., 105.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Comparative analyses of QTLs influencing obesity and metabolic phenotypes in pigs and humans

    Pant, S. D., Karlskov-Mortensen, Peter, Jacobsen, M. J., Cirera, Susanna, Kogelman, L., Bruun, Camilla Vibeke Sichlau, Mark, T., Jørgensen, Claus Bøttcher, Grarup, Niels, Appel, E. V. R., Galjatovic, E. A. A., Hansen, T., Pedersen, Oluf Borbye, Guerin, M., Huby, T., Lesnik, P., Meuwissen, T. H. E., Kadarmideen, H. & Fredholm, Merete, 8 Sep 2015, In: PLOS ONE. 10, 9, 22 p., e0137356.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Gender and obesity specific MicroRNA expression in adipose tissue from lean and obese pigs

    Mentzel, Caroline M. Junker, Anthon, Christian, Jacobsen, M. J., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Gorodkin, Jan, Cirera, Susanna & Fredholm, Merete, 29 Jul 2015, In: P L o S One. 10, 7, 19 p., e0131650.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    Alpha-smooth muscle actin and serotonin receptors 2A and 2B in dogs with myxomatous mitral valve disease

    Cremer, Signe Emilie, Moesgaard, S. G., Rasmussen, C. E., Zois, N. E., Falk, T., Reimann, Maria Josefine, Cirera, Susanna, Aupperle, H., Oyama, M. A. & Olsen, Lisbeth Høier, 19 Mar 2015, In: Research in Veterinary Science. 100, p. 197-206 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published
  74. Published

    Serotonin markers show altered transcription levels in an experimental pig model of mitral regurgitation

    Cremer, Signe Emilie, Zois, N. E., Moesgaard, S. G., Ravn, N., Cirera, Susanna, Honge, J. L., Smerup, M. H., Hasenkam, J. M., Sloth, E., Leifsson, Páll S., Falk, B. T., Oyama, M. A., Orton, C., Martinussen, Torben & Olsen, Lisbeth Høier, 2015, In: The Veterinary Journal. 203, 2, p. 192-198 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. 2014
  76. Published

    Wet-lab Tested MicroRNA Assays for qPCR Studies with SYBR®Green and DNA Primers in Pig Tissues

    Mentzel, Caroline M. Junker, Skovgaard, K., Cordoba, S., Herrera Uribe, J., Busk, P. K. & Cirera, Susanna, 26 Dec 2014, In: MicroRNA. 3, 3, p. 174-88 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Expression studies of six human obesity-related genes in seven tissues from divergent pig breeds

    Cirera, Susanna, Jensen, M. S., Elbrønd, V. S., Moesgaard, S. G., Christoffersen, B. O., Kadarmideen, H., Skovgaard, K., Bruun, Camilla Vibeke Sichlau, Karlskov-Mortensen, Peter, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2014, In: Animal Genetics. 45, 1, p. 59-66 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Extensive changes in innate immune gene expression in obese Gottingen minipigs do not lead to changes in concentrations of circulating cytokines and acute phase proteins

    Højbøge, T. R., Skovgaard, K., Moesgaard, S. G., Cirera, Susanna, Christoffersen, B. Ø. & Heegaard, P. M. H., 2014, In: Animal Genetics. 45, 1, p. 67-73 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Functional network analysis of obese and lean Göttingen minipigs elucidates changes in oxidative and inflammatory networks in obese pigs

    Boonen, H. C. M., Moesgaard, S. G., Birck, M. M., Christoffersen, B. Ø., Cirera, Susanna, Heegaard, P. M. H., Højbøge, T. R., Jensen, Lars Jørn, Mortensen, A., Olsen, Lisbeth Høier, Sheykhzade, Majid, Tang, J. & Lykkesfeldt, Jens, 2014, In: Pflügers ARchiv (European Journal of Physiology). 466, 12, p. 2167-2176 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Genome-wide Linkage Disequilibrium Linkage Analysis (LDLA) of Body Fat Traits in an F2 Porcine Model for Human Obesity

    Pant, S. D., Karlskov-Mortensen, Peter, Cirera, Susanna, Kogelman, L., Jacobsen, M. J., Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Meuwissen, T. H. E., Kadarmideen, H. & Fredholm, Merete, 2014. 4 p.

    Research output: Contribution to conferencePosterResearchpeer-review

  81. Published

    Identification of co-expression gene networks, regulatory genes and pathways for obesity based on adipose tissue RNA Sequencing in a porcine model

    Kogelman, L., Cirera, Susanna, Zhernakova, D. V., Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014, In: B M C Genomics. 7, 16 p., 57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Quantification of miRNAs by a simple and specific qPCR method

    Cirera, Susanna & Busk, P. K., 2014, In: Methods in Molecular Biology. 1182, p. 73-81 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Strong association between activated valvular interstitial cells and histopathological lesions in porcine model of induced mitral regurgitation

    Cremer, Signe Emilie, Zois, N. E., Moesgaard, S. G., Ravn, N., Cirera, Susanna, Honge, J. L., Smerup, M. H., Hasenkam, J. M., Sloth, E., Leifsson, Páll S., Falk, B. T., Oyama, M. A., Orton, C., Martinussen, Torben & Olsen, Lisbeth Høier, 2014, In: International Journal of Cardiology. 174, 2, p. 443-446 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  84. Published

    Systems biology and RNA-Seq analyses to detect biomarkers for metabolic syndrome in a porcine model

    Mantas, P., Kogelman, L., Cirera, Susanna, Fredholm, Merete & Kadarmideen, H., 2014.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  85. Published

    Systems genetics analysis of RNA-Seq data to unravel the genetics of obesity using a porcine model

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  86. Published

    Systems genetics analysis of obesity using RNA-Seq data in an F2 pig resource population

    Kogelman, L., Zhernakova, D. V., Westra, H., Cirera, Susanna, Fredholm, Merete, Franke, L. & Kadarmideen, H., 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production. 3 p.

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

  87. 2013
  88. Published

    Gene expression in mesenteric lymph nodes of pigs with two different genotypes associated with resistance or susceptibility to Ascaris suum

    Skallerup, P., Nejsum, P., Jørgensen, Claus Bøttcher, Cirera, Susanna, Skovgaard, K., Pipper, C. B., Fredholm, Merete & Thamsborg, Stig Milan, 10 Sep 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  89. Published

    Gene expression in mesenteric lymph nodes of pigs with two different genotypes associated with resistance or susceptibility to Ascaris suum

    Skallerup, P., Nejsum, P., Jørgensen, Claus Bøttcher, Cirera, Susanna, Skovgaard, K., Pipper, C. B., Fredholm, Merete & Thamsborg, Stig Milan, 26 Aug 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  90. Published

    A Gly98Val mutation in the N-myc downstream regulated gene 1 (NDRG1) in Alaskan Malamutes with polyneuropathy

    Bruun, C. V. S., Jäderlund, K. H., Berendt, M., Jensen, K. B., Spodsberg, E-M. H., Gredal, H. B., Shelton, G. D., Mickelson, J. R., Minor, K. M., Lohi, H., Bjerkås, I., Stigen, Ø., Espenes, A., Rohdin, C., Edlund, R., Ohlsson, J., Cizinauskas, S., Leifsson, P. S., Drögemüller, C., Moe, L. & 2 others, Cirera, Susanna & Fredholm, Merete, 2013, In: PLOS one. 8, 2, p. 1-7 7 p., e54547.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    An F2 pig resource population as a model for genetic studies of obesity and obesity-related diseases in humans: design and genetic parameters

    Kogelman, L., Kadarmideen, H., Mark, T., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Jacobsen, M. J., Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013, In: Frontiers in Genetics. 4, 14 p., 29.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    Characterisation of gut microbiota in Ossabaw and Göttingen minipigs as models of obesity and metabolic syndrome

    Pedersen, R., Ingerslev, H., Sturek, M., Alloosh, M., Cirera, Susanna, Christoffersen, B. Ø., Moesgaard, S. G., Larsen, N. & Boye, M., 2013, In: PLOS ONE. 8, 2, 10 p., e56612.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Characterization of a Small auxin-up RNA (SAUR)-like gene involved in Arabidopsis thaliana development

    Nektarios Markakis, M., Karolina Boron, A., Van Loock, B., Saini, K., Cirera, Susanna, Verbelen, J. & Vissenberg, K., 2013, In: PloS One. 8, 11, 13 p., e82596.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Expression of innate immune genes, proteins and microRNAs in lung tissue of pigs infected experimentally with influenza virus (H1N2)

    Skovgaard, K., Cirera, Susanna, Vasby, Ditte Erika Leth, Podolska, A., Breum, S. Ø., Dürrwald, R., Schlegel, M. & Heegaard, P. M. H., 2013, In: Innate Immunity. 19, 5, p. 531-544 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Extensive changes in innate immune gene expression in obese Göttingen minipigs do not lead to changes in concentrations of circulating cytokines and acute phase proteins

    Højbøge, T. R., Skovgaard, K., Moesgaard, S. G., Cirera, Susanna, Christoffersen, B. Ø. & Heegaard, P. M. H., 2013, In: Animal Genetics. 45, 1, p. 67-73 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Functional characterization of a porcine emphysema model

    Bruun, Camilla Vibeke Sichlau, Jensen, Louise Kruse, Leifsson, Páll S., Nielsen, J., Cirera, Susanna, Jørgensen, Claus Bøttcher, Jensen, Henrik Elvang & Fredholm, Merete, 2013, In: Lung. 191, 6, p. 669-675 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Global Analysis of Genetic and Epigenetic differences associated with Obesity

    Jacobsen, M. J., Mentzel, Caroline M. Junker, Kogelman, L., Mark, T., Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Gorodkin, Jan, Kadarmideen, H., Barrès, Romain, Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  98. Published

    Highly efficient method for isolation of total RNA from adipose tissue

    Cirera, Susanna, 2013, In: BMC Research Notes. 6, 5 p., 472.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    New insights into the melanophilin (MLPH) gene controlling coat color phenotypes in American mink

    Cirera, Susanna, Markakis, M. N., Christensen, Knud Arnbjerg & Anistoroaei, R. M., 2013, In: Gene. 527, 1, p. 48-54 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    Orosomucoid expression profiles in liver, adipose tissues and serum of lean and obese domestic pigs, Göttingen minipigs and Ossabaw minipigs

    Højbøge, T. R., Stagsted, J., Christoffersen, B. Ø., Cirera, Susanna, Moesgaard, S. G., Sturek, M., Alloosh, M. & Heegaard, P. M. H., 2013, In: Veterinary Immunology and Immunopathology. 151, 3-4, p. 325-330 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Plasma proANP and SDMA and microRNAs are associated with chronic mitral regurgitation in a pig model

    Cirera, Susanna, Moesgaard, S. G., Zois, N. E., Ravn, N., Goetze, Jens P. , Cremer, Signe Emilie, Teerlink, T., Leifsson, Páll S., Honge, J. L., Hasenkam, J. M. & Olsen, Lisbeth Høier, 2013, In: Endocrine Connections. 2, 3, p. 161-171 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. Published

    Potential role of the porcine superoxide dismutase 1 (SOD1) gene in pig reproduction

    Bjerre, D., Madsen, L. B., Mark, T., Cirera, Susanna, Larsen, K., Jørgensen, Claus Bøttcher & Fredholm, Merete, 2013, In: Animal Biotechnology (Print Edition). 24, 1, p. 1-9 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  103. Published

    Systems genetics analysis of obesity using RNA-Seq data

    Kogelman, L., Cirera, Susanna, Fredholm, Merete & Kadarmideen, H., 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  104. Published

    The pig as a model for studies of genomics of obesity and obesity related metabolic diseases

    Kadarmideen, H., Pant, S. D., Karlskov-Mortensen, Peter, Kogelman, L., Cirera, Susanna, Jacobsen, M. J., Bruun, Camilla Vibeke Sichlau, Jørgensen, Claus Bøttcher, Meuwissen, T. H. E. & Fredholm, Merete, 2013.

    Research output: Contribution to conferencePosterResearchpeer-review

  105. 2012
  106. Published

    A deletion in the bovine FANCI gene compromises fertility by causing fetal death and brachyspina

    Charlier, C., Agerholm, Jørgen Steen, Coppieters, W., Karlskov-Mortensen, Peter, Li, W., Jong, G. D., Fasquelle, C., Karim, L., Cirera, Susanna, Gambisano, N., Ahariz, N., Mullaart, E., Georges, M. & Fredholm, Merete, 2012, In: PLoS ONE. 7, 8, 7 p., e43085.

    Research output: Contribution to journalJournal articleResearchpeer-review

  107. Published

    Genetic parameters for fatness-related traits in pigs: animal model for human obesity

    Kogelman, L., Mark, T., Karlskov-Mortensen, Peter, Bruun, C. S., Cirera, Susanna, Jørgensen, Claus Bøttcher, Fredholm, Merete & Kadarmideen, H., 2012.

    Research output: Contribution to conferencePosterResearchpeer-review

  108. 2011
  109. Published

    Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs

    Jacobsen, M. J., Cirera, Susanna, Joller, D., Esteso, G., Kracht, S. S., Edfors, I., Bendixen, C., Archibald, A. L., Vogeli, P., Neuenschwander, S., Bertschinger, H. U., Rampoldi, A., Andersson, L., Fredholm, Merete & Jørgensen, Claus Bøttcher, 2011, In: BMC Research Notes. 4, 225, 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  110. Published

    Exonization of a LINE1 fragment implicated in X-linked hypohidrotic ectodermal dysplasia in cattle

    Karlskov-Mortensen, Peter, Cirera, Susanna, Nielsen, O. L., Arnbjerg, J., Reibel, Jesper, Fredholm, Merete & Agerholm, Jørgen Steen, 2011, In: Animal Genetics. 42, 6, p. 578-584 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  111. Published

    Global microRNA analysis of the NCI-60 cancer cell panel

    Søkilde, R., Kaczkowski, B., Podolska, A., Cirera, Susanna, Gorodkin, Jan, Møller, S. & Litman, T., 2011, In: Molecular Cancer Therapeutics. 10, 3, p. 375-384 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  112. Published

    How the RNA isolation method can affect microRNA microarray results

    Podolska, A., Kaczkowski, B., Litman, Thomas, Fredholm, Merete & Cirera, Susanna, 2011, In: Acta Biochimica Polonica. 58, 4, p. 535-540 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  113. Published

    Identification of 2 loci associated with development of myxomatous mitral valve disease in Cavalier King Charles Spaniels

    Madsen, M. B., Olsen, Lisbeth Høier, Häggström, J., Höglund, K., Ljungvall, I., Falk, B. T., Wess, G., Stephenson, H., Dukes-McEwan, J., Chetboul, V., Gouni, V., Proschowsky, Helle Friis, Cirera, Susanna, Karlskov-Mortensen, Peter & Fredholm, Merete, 2011, In: Journal of Heredity. 102, Suppl. 1, p. S62-S67 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  114. Published

    MicroRNA expression profiling of the porcine developing brain

    Podolska, A., Kaczkowski, B., Busk, P. K., Søkilde, R., Litman, T., Fredholm, Merete & Cirera, Susanna, 2011, In: P L o S One. 6, p. e14494 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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