Sofie Holtsmark Nielsen

Sofie Holtsmark Nielsen

Visiting researcher


Publication year:
  1. 2022
  2. Published

    Genomic ancestry, diet and microbiomes of Upper Palaeolithic hunter-gatherers from San Teodoro cave (Sicily, Italy)

    Scorrano, Gabriele, Nielsen, Sofie Holtsmark, Vetro, D. L., Sawafuji, R., Mackie, M., Margaryan, Ashot, Fotaki, Anna Katerina, Martínez-Labarga, C., Fabbri, P. F., Allentoft, Morten Erik, Carra, M., Martini, F., Rickards, O., Olsen, Jesper Velgaard, Pedersen, Mikkel Winther, Cappellini, Enrico & Sikora, Martin, 2022, In: Communications Biology. 5

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Sentinel surveillance and epidemiology of Clostridioides difficile in Denmark, 2016 to 2019

    Persson, S., Nielsen, H. L., Coia, J. E., Engberg, J., Olesen, B. S., Engsbro, A. L., Petersen, Andreas Munk, Holt, H. M., Lemming, L., Marmolin, E. S., Søndergaard, T. S., Andersen, Leif Percival, Jensen, M. B. F., Wiuff, C., Sørensen, G., Nielsen, Sofie Holtsmark & Nielsen, E. M., 2022, In: Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin. 27, 49, 2200244.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. 2020
  5. Published

    Diverse variola virus (smallpox) strains were widespread in northern Europe in the Viking Age

    Mühlemann, B., Vinner, Lasse, Margaryan, Ashot, Wilhelmson, H., de la Fuente Castro, C., Allentoft, Morten Erik, de Barros Damgaard, P., Hansen, Anders Johannes, Nielsen, Sofie Holtsmark, Strand, L. M., Bill, J., Buzhilova, A., Pushkina, T., Falys, C., Khartanovich, V., Moiseyev, V., Jørkov, M L S, Østergaard Sørensen, P., Magnusson, Y., Gustin, I., Schroeder, Hannes, Sutter, G., Smith, G. L., Drosten, C., Fouchier, R. A. M., Smith, D. J., Willerslev, Eske, Jones, T. C. & Sikora, Martin, 2020, In: Science (New York, N.Y.). 369, 6502, p. 1-12

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. 2019
  7. Published

    A 5700 year-old human genome and oral microbiome from chewed birch pitch

    Jensen, Theis Zetner Trolle, Niemann, Jonas, Iversen, K. H., Fotaki, Anna Katerina, Gopalakrishnan, Shyam, Vågene, Åshild Joanne, Pedersen, Mikkel Winther, Sinding, Mikkel Holger Strander, Ellegaard, M. R., Allentoft, Morten Erik, Lanigan, Liam Thomas, Taurozzi, Alberto John, Nielsen, Sofie Holtsmark, Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, Matthew James, Gilbert, M Thomas P, Sikora, Martin, Rasmussen, Simon & Schroeder, Hannes, 2019, In: Nature Communications. 10, 10 p., 5520.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Shotgun sequencing of clinical biofilm following scanning electron microscopy identifies bacterial community composition

    Fritz, Blaine Gabriel, Stavnsbjerg, Camilla, Markvart, Merete, Damgaard, P. D. B., Nielsen, Sofie Holtsmark, Bjørndal, Lars, Qvortrup, Klaus & Bjarnsholt, Thomas, 2019, In: Pathogens and Disease. 77, 1, 7 p., ftz013.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 177544614