Rasmus Nielsen

Rasmus Nielsen

Professor

ORCID: 0000-0003-0513-6591

Publication year:
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  1. 2024
  2. Published

    100 ancient genomes show repeated population turnovers in Neolithic Denmark

    Allentoft, M. E., Sikora, M., Fischer, A., Sjögren, K-G., Ingason, A., Macleod, R., Rosengren, A., Schulz Paulsson, B., Jørkov, M. L. S., Novosolov, M., Stenderup, J., Price, T. D., Mortensen, M. F., Nielsen, A. B., Hede, M. U., Sørensen, L., Nielsen, P. O., Rasmussen, P., Jensen, T. Z. T., Refoyo-Martínez, A. & 48 others, Irving-Pease, Evan, Barrie, William, Pearson, A., Sousa da Mota, B., Demeter, Fabrice, Henriksen, Rasmus Henrik Amund, Vimala, Tharsika, McColl, Hugh, Vaughn, Andrew Howland, Vinner, Lasse, Renaud, Gabriel, Stern, A., Johannsen, N. N., Ramsøe, Abigail Daisy, Schork, A. J., Ruter, Anthony Henry, Gotfredsen, Anne Birgitte, Nielsen, B. H., Petersen, Erik Brinch, Kannegaard, E., Hansen, J., Pedersen, K. B., Pedersen, L., Klassen, L., Meldgaard, Morten, Johansen, M., Uldum, O. C., Lotz, P., Lysdahl, P., Bangsgaard, Pernille, Petersen, P. V., Maring, R., Iversen, Rune, Wåhlin, S., Sørensen, S. A., Andersen, S. H., Jørgensen, T., Lynnerup, Niels, Lawson, D. J., Rasmussen, Simon, Korneliussen, Thorfinn Sand, Kjær, Kurt H., Durbin, R., Nielsen, Rasmus, Delaneau, O., Werge, Thomas, Kristiansen, Kristian & Willerslev, Eske, 2024, In: Nature. 625, 7994, p. 329-337 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Elevated genetic risk for multiple sclerosis emerged in steppe pastoralist populations

    Barrie, W., Yang, Y., Irving-Pease, E. K., Attfield, K. E., Scorrano, G., Jensen, L. T., Armen, A. P., Dimopoulos, E. A., Stern, A., Refoyo-Martinez, A., Pearson, A., Ramsøe, A., Gaunitz, C., Demeter, F., Jørkov, M. L. S., Møller, S. B., Springborg, B., Klassen, L., Hyldgård, I. M., Wickmann, N. & 11 others, Vinner, Lasse, Korneliussen, Thorfinn Sand, Allentoft, Morten Erik, Sikora, Martin, Kristiansen, Kristian, Rodriguez, S., Nielsen, Rasmus, Iversen, A. K. N., Lawson, D. J., Fugger, Lars & Willerslev, Eske, 2024, In: Nature. 625, 7994, p. 321-328

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Functional annotation of variants of the BRCA2 gene via locally haploid human pluripotent stem cells

    Li, H., Bartke, R., Zhao, Lei, Verma, Y., Horacek, A., Rechav Ben-Natan, A., Pangilinan, G. R., Krishnappa, N., Nielsen, Rasmus & Hockemeyer, D., 2024, In: Nature Biomedical Engineering. 8, 2, p. 165-176

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Population genomics of post-glacial western Eurasia

    Allentoft, M. E., Sikora, M., Refoyo-Martínez, A., Irving-Pease, E. K., Fischer, A., Barrie, W., Ingason, A., Stenderup, J., Sjögren, K-G., Pearson, A., da Mota, B. S., Paulsson, B. S., Halgren, A., Macleod, R., Jørkov, M. L. S., Demeter, F., Sørensen, L., Nielsen, P. O., Henriksen, R. A., Vimala, T. & 144 others, McColl, Hugh, Margaryan, Ashot, Ilardo, M., Vaughn, Andrew Howland, Mortensen, M. F., Nielsen, A. B., Hede, M. U., Johannsen, N. N., Rasmussen, P., Vinner, Lasse, Renaud, Gabriel, Stern, A., Jensen, Theis Zetner Trolle, Scorrano, Gabriele, Schroeder, Hannes, Lysdahl, P., Ramsøe, Abigail Daisy, Skorobogatov, A., Schork, A. J., Rosengren, A., Ruter, Anthony Henry, Outram, A., Timoshenko, A. A., Buzhilova, A., Coppa, A., Zubova, A., Silva, A. M., Hansen, Anders Johannes, Gromov, A., Logvin, A., Gotfredsen, Anne Birgitte, Nielsen, B. H., González-Rabanal, B., Lalueza-Fox, C., McKenzie, C. J., Gaunitz, Charleen, Blasco, C., Liesau, C., Martinez-Labarga, C., Pozdnyakov, D. V., Cuenca-Solana, D., Lordkipanidze, D. O., En’shin, D., Salazar-García, D. C., Price, T. D., Borić, D., Kostyleva, E., Veselovskaya, E. V., Usmanova, E. R., Cappellini, Enrico, Petersen, Erik Brinch, Kannegaard, E., Radina, F., Yediay, Fulya Eylem, Duday, H., Gutiérrez-Zugasti, I., Merts, I., Potekhina, I., Shevnina, I., Altinkaya, Isin, Guilaine, J., Hansen, J., Tortosa, J. E. A., Zilhão, J., Vega, J., Pedersen, K. B., Tunia, K., Zhao, Lei, Mylnikova, L. N., Larsson, L., Metz, L., Yepiskoposyan, L., Pedersen, L., Sarti, L., Orlando, L., Slimak, L., Klassen, L., Blank, M., González-Morales, M., Silvestrini, M., Vretemark, M., Nesterova, M. S., Rykun, M., Rolfo, M. F., Szmyt, M., Przybyła, M., Calattini, M., Sablin, M., Dobisíková, M., Meldgaard, Morten, Johansen, M., Berezina, N., Card, N., Saveliev, N. A., Poshekhonova, O., Rickards, O., Lozovskaya, O. V., Gábor, O., Uldum, O. C., Aurino, P., Kosintsev, P., Courtaud, P., Ríos, P., Mortensen, P., Lotz, P., Persson, P., Bangsgaard, Pernille, de Barros Damgaard, P., Vang Petersen, P., Martinez, P. P., Włodarczak, P., Smolyaninov, R. V., Maring, R., Menduiña, R., Badalyan, R., Iversen, Rune, Turin, R., Vasilyev, S., Wåhlin, S., Borutskaya, S., Skochina, S., Sørensen, S. A., Andersen, S. H., Jørgensen, T., Serikov, Y. B., Molodin, V. I., Smrcka, V., Merts, V., Appadurai, V., Moiseyev, V., Magnusson, Y., Kjær, Kurt H., Lynnerup, Niels, Lawson, D. J., Sudmant, P. H., Rasmussen, Simon, Korneliussen, Thorfinn Sand, Durbin, R., Nielsen, Rasmus, Delaneau, O., Werge, Thomas, Racimo, Fernando, Kristiansen, Kristian & Willerslev, Eske, 2024, In: Nature. 625, 7994, p. 301-311

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. 2023
  7. Published

    Bayesian inference of admixture graphs on Native American and Arctic populations

    Nielsen, S. V., Vaughn, Andrew Howland, Leppälä, K., Landis, M. J., Mailund, T. & Nielsen, Rasmus, 2023, In: PLOS Genetics. 19, 2, 22 p., e1010410.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    North African fox genomes show signatures of repeated introgression and adaptation to life in deserts

    L. Rocha, J., Silva, P., Santos, N., Nakamura, M., Afonso, S., Qninba, A., Boratynski, Z., Sudmant, P. H., Brito, J. C., Nielsen, Rasmus & Godinho, R., 2023, In: Nature Ecology and Evolution. 7, 8, p. 1267-1286

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. 2022
  10. Published

    AncestralClust: clustering of divergent nucleotide sequences by ancestral sequence reconstruction using phylogenetic trees

    Pipes, L. & Nielsen, Rasmus, 2022, In: Bioinformatics. 38, 3, p. 663-670 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Covariance of pairwise differences on a multi-species coalescent tree and implications for FST

    Guerra, G. & Nielsen, Rasmus, 2022, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 377, 1852, 14 p., 20200415.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Detecting Selection in Multiple Populations by Modeling Ancestral Admixture Components

    Cheng, J. Y., Stern, A. J., Racimo, Fernando & Nielsen, Rasmus, 2022, In: Molecular Biology and Evolution. 39, 1, 14 p., msab294.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    DistAngsd: Fast and Accurate Inference of Genetic Distances for Next-Generation Sequencing Data

    Zhao, Lei, Nielsen, Rasmus & Korneliussen, Thorfinn Sand, 2022, In: Molecular Biology and Evolution. 39, 6, 14 p., msac119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Estimating the relative proportions of SARS-CoV-2 haplotypes from wastewater samples

    Pipes, L., Chen, Z., Afanaseva, S. & Nielsen, Rasmus, 2022, In: Cell Reports Methods. 2, 10, 100313.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Estimating the timing of multiple admixture events using 3-locus linkage disequilibrium

    Liang, M., Shishkin, M., Mikhailova, A., Shchur, V. & Nielsen, Rasmus, 2022, In: PLOS Genetics. 18, 7, 17 p., e1010281.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Evaluation of methods for estimating coalescence times using ancestral recombination graphs

    Y C Brandt, D., Wei, X., Deng, Y., Vaughn, A. H. & Nielsen, Rasmus, 2022, In: Genetics. 221, 1, 13 p., iyac044.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Genetic risk for Multiple Sclerosis originated in Pastoralist Steppe populations

    Barrie, W., Yang, Y., Attfield, K. E., Irving-Pease, E., Scorrano, G., Jensen, L. T., Armen, A. P., Dimopoulos, E. A., Stern, A., Refoyo-Martínez, A., Ramsøe, A., Gaunitz, C., Demeter, F., Jørkov, M. L. S., Møller, S. B., Springborg, B., Klassen, L., Hyldgård, I. M., Wickmann, N., Vinner, L. & 9 others, Korneliussen, Thorfinn Sand, Sikora, Martin, Kristiansen, K., Rodriguez, S., Nielsen, Rasmus, Iversen, A. K. N., Lawson, D. J., Fugger, L. & Willerslev, Eske, 2022, bioRxiv, 55 p.

    Research output: Working paper › Preprint › Research

  18. Published

    Modern population genetics and race

    Nielsen, Rasmus, 2022, Remapping Race in a Global Context. Lorusso, L. & Winther, R. G. (eds.). Routledge, p. 157-163 7 p. (History and Philosophy of Biology).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  19. Population Genomics of Variegated Toad-Headed Lizard Phrynocephalus versicolor and Its Adaptation to the Colorful Sand of the Gobi Desert

    Jin, Y., Aguilar-Gómez, D., Brandt, D. Y. C., Square, T. A., Li, J., Liu, Z., Wang, T., Sudmant, P. H., Miller, C. T. & Nielsen, Rasmus, 2022, In: Genome Biology and Evolution. 14, 7, 14 p., evac076.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Predicting Egg Passage Adaptations to Design Better Vaccines for the H3N2 Influenza Virus

    Liu, Y., Chen, H., Duan, W., Zhang, X., He, X., Nielsen, Rasmus, Ma, L. & Zhai, W., 2022, In: Viruses. 14, 9, 16 p., 2065.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. SCONCE: a method for profiling copy number alterations in cancer evolution using single-cell whole genome sequencing

    Hui, S. & Nielsen, Rasmus, 2022, In: Bioinformatics. 38, 7, p. 1801-1808 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The Selection Landscape and Genetic Legacy of Ancient Eurasians

    Irving-Pease, E., Refoyo Martínez, A., Ingason, A., Pearson, A., Fischer, A., Barrie, W., Sjögren, K-G., Halgren, A. S., Macleod, R., Demeter, F., Henriksen, R. H. A., Vimala, T., McColl, H., Vaughn, A., Stern, A. J., Speidel, L., Scorrano, G., Ramsøe, A., Schork, A. J., Rosengren, A. & 12 others, Zhao, Lei, Kristiansen, K., Sudmant, P. H., Lawson, D. J., Durbin, R., Korneliussen, Thorfinn Sand, Werge, Thomas, Allentoft, Morten Erik, Sikora, Martin, Nielsen, Rasmus, Racimo, Fernando & Willerslev, Eske, 2022, bioRxiv, 26 p.

    Research output: Working paper › Preprint › Research

  23. The Tibetan-Yi region is both a corridor and a barrier for human gene flow

    Zhang, Z., Zhang, Y., Wang, Y., Zhao, Z., Yang, M., Zhang, L., Zhou, B., Xu, B., Zhang, H., Chen, T., Dai, W., Zhou, Y., Shi, S., Nielsen, Rasmus, Li, S. C. & Li, S., 2022, In: Cell Reports. 39, 4, 16 p., 110720.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The genetic architecture of phenotypic diversity in the Betta fish (Betta splendens)

    Zhang, W., Wang, H., Brandt, D. Y. C., Hu, B., Sheng, J., Wang, M., Luo, H., Li, Y., Guo, S., Sheng, B., Zeng, Q., Peng, K., Zhao, D., Jian, S., Wu, D., Wang, J., Zhao, G., Ren, J., Shi, W., van Esch, J. H. M. & 3 others, Klingunga, S., Nielsen, Rasmus & Hong, Y., 2022, In: Science Advances. 8, 38, 13 p., eabm4955.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The population genomic legacy of the second plague pandemic

    Gopalakrishnan, S., Ebenesersdóttir, S. S., Lundstrøm, I. K. C., Turner-Walker, G., Moore, K. H. S., Luisi, P., Margaryan, A., Martin, M. D., Ellegaard, M. R., Magnússon, Ó., Sigurðsson, Á., Snorradóttir, S., Magnúsdóttir, D. N., Laffoon, J. E., van Dorp, L., Liu, X., Moltke, I., Ávila-Arcos, M. C., Schraiber, J. G., Rasmussen, S. & 40 others, Juan, D., Gelabert, P., de-Dios, T., Fotaki, Anna Katerina, Iraeta Orbegozo, Miren, Vågene, Åshild Joanne, Denham, S. D., Christophersen, A., Stenøien, H. K., Vieira, Filipe Garrett, Liu, Shanlin, Günther, T., Kivisild, T., Moseng, O. G., Skar, B., Cheung, C., Sandoval-Velasco, Marcela, Wales, N., Schroeder, Hannes, Campos, P. F., Guðmundsdóttir, V. B., Sicheritz-Pontén, Thomas, Petersen, Bent, Halgunset, J., Gilbert, E., Cavalleri, G. L., Hovig, E., Kockum, I., Olsson, T., Alfredsson, L., Hansen, Thomas Folkmann, Werge, Thomas, Willerslev, Eske, Balloux, F., Marques-Bonet, T., Lalueza-Fox, C., Nielsen, Rasmus, Stefánsson, K., Helgason, A. & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 21, p. 4743-4751.e6

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. 2021
  27. Published

    Assessing Uncertainty in the Rooting of the SARS-CoV-2 Phylogeny

    Pipes, L., Wang, H., Huelsenbeck, J. P. & Nielsen, Rasmus, 2021, In: Molecular Biology and Evolution. 38, 4, p. 1537-1543 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Convergent evolution of increased urine-concentrating ability in desert mammals

    Rocha, J. L., Brito, J. C., Nielsen, Rasmus & Godinho, R., 2021, In: Mammal Review. 51, 4, p. 482-491 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  29. Disentangling selection on genetically correlated polygenic traits via whole-genome genealogies

    Stern, A. J., Speidel, L., Zaitlen, N. A. & Nielsen, Rasmus, 2021, In: American Journal of Human Genetics. 108, 2, p. 219-239 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes

    Ai, H., Zhang, M., Yang, B., Goldberg, A., Li, W., Ma, J., Brandt, D., Zhang, Z., Nielsen, Rasmus & Huang, L., 2021, In: Molecular Biology and Evolution. 38, 11, p. 5051-5065 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Inferring Adaptive Introgression Using Hidden Markov Models

    Svedberg, J., Shchur, V., Reinman, S., Nielsen, Rasmus & Corbett-Detig, R., 2021, In: Molecular Biology and Evolution. 38, 5, p. 2152-2165 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Investigate the origins of COVID-19

    Bloom, J. D., Chan, Y. A., Baric, R. S., Bjorkman, P. J., Cobey, S., Deverman, B. E., Fisman, D. N., Gupta, R., Iwasaki, A., Lipsitch, M., Medzhitov, R., Neher, R. A., Nielsen, Rasmus, Patterson, N., Stearns, T., van Nimwegen, E., Worobey, M. & Relman, D. A., 2021, In: Science. 372, 6543, p. 694 1 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  33. Published

    Life in Deserts: The Genetic Basis of Mammalian Desert Adaptation

    Rocha, J. L., Godinho, R., Brito, J. C. & Nielsen, Rasmus, 2021, In: Trends in Ecology & Evolution. 36, 7, p. 637-650

    Research output: Contribution to journal › Review › Research › peer-review

  34. Published

    Synonymous mutations and the molecular evolution of SARS-CoV-2 origins

    Wang, H., Pipes, L. & Nielsen, Rasmus, 2021, In: Virus Evolution. 7, 1, 11 p., veaa098.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. The CALeDNA program: Citizen scientists and researchers inventory California's biodiversity

    Meyer, R. S., Ramos, M. M., Lin, M., Schweizer, T. M., Gold, Z., Ramos, D. R., Shirazi, S., Kandlikar, G., Kwan, W. Y., Curd, E. E., Freise, A., Parker, J. M., Sexton, J. P., Wetzer, R., Pentcheff, N. D., Wall, A. R., Pipes, L., Garcia- Vedrenne, A., Mejia, M. P., Moore, T. & 12 others, Orland, C., Ballare, K. M., Worth, A., Beraut, E., Aronson, E. L., Nielsen, Rasmus, Lewin, H. A., Barber, P. H., Wall, J., Kraft, N., Shapiro, B. & Wayne, R. K., 2021, In: California Agriculture. 75, 1, p. 20-32 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. The distribution of waiting distances in ancestral recombination graphs

    Deng, Y., Song, Y. S. & Nielsen, Rasmus, 2021, In: Theoretical Population Biology. 141, p. 34-43 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. The genomics of mimicry: Gene expression throughout development provides insights into convergent and divergent phenotypes in a Müllerian mimicry system

    Stuckert, A. M. M., Chouteau, M., McClure, M., LaPolice, T. M., Linderoth, T., Nielsen, Rasmus, Summers, K. & MacManes, M. D., 2021, In: Molecular Ecology. 30, 16, p. 4039-4061 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The history and evolution of the Denisovan-EPAS1 haplotype in Tibetans

    Zhang, X., Witt, K. E., Banuelos, M. M., Ko, A., Yuan, K., Xu, S., Nielsen, Rasmus & Huerta-Sanchez, E., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 22, 9 p., 2020803118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep

    Chen, Z., Xu, Y., Xie, X., Wang, D., Aguilar-Gómez, D., Liu, G., Li, X., Esmailizadeh, A., Rezaei, V., Kantanen, J., Ammosov, I., Nosrati, M., Periasamy, K., Coltman, D. W., Lenstra, J. A., Nielsen, Rasmus & Li, M., 2021, In: Communications Biology . 4, 15 p., 1307.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. 2020

  41. A Bayesian Framework for Inferring the Influence of Sequence Context on Point Mutations

    Ling, G., Miller, D., Nielsen, Rasmus & Stern, A., 2020, In: Molecular Biology and Evolution. 37, 3, p. 893-903 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    A draft genome sequence of the elusive giant squid, Architeuthis dux

    da Fonseca, R. R., Couto, A., Machado, A. M., Brejova, B., Albertin, C. B., Silva, F., Gardner, P., Baril, T., Hayward, A., Campos, A., Ribeiro, Â. M., Barrio-Hernandez, I., Hoving, H-J., Tafur-Jimenez, R., Chu, C., Frazão, B., Petersen, B., Peñaloza, F., Musacchia, F., Alexander, G. C. & 24 others, Osório, H., Winkelmann, I., Simakov, O., Rasmussen, Simon, Rahman, M. Z., Pisani, D., Vinther, J., Jarvis, E., KU, thw266, Strugnell, J. M., Castro, L. F. C., Fedrigo, O., Patricio, M., Li, Q., Rocha, S., Antunes, A., Wu, Y., Ma, B., Sanges, R., Vinar, T., Blagoev, B., Sicheritz-Pontén, Thomas, Nielsen, Rasmus & Gilbert, M Thomas P, 2020, In: GigaScience. 9, 1, 12 p., giz152.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    A likelihood method for estimating present-day human contamination in ancient male samples using low-depth X-chromosome data

    Moreno-Mayar, J. V., Korneliussen, Thorfinn Sand, Dalal, J., Renaud, Gabriel, Albrechtsen, Anders, Nielsen, Rasmus & Malaspinas, A., 2020, In: Bioinformatics. 36, 3, p. 828-841 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Ancient Hybridization with an Unknown Population Facilitated High-Altitude Adaptation of Canids

    Wang, M., Wang, S., Li, Y., Jhala, Y., Thakur, M., Otecko, N. O., Si, J., Chen, H., Shapiro, B., Nielsen, Rasmus, Zhang, Y., Wu, D. & Parsch, J. (ed.), 2020, In: MOLECULAR BIOLOGY AND EVOLUTION . 37, 9, p. 2616-2629

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Divergence, gene flow, and the origin of leapfrog geographic distributions: The history of colour pattern variation in Phyllobates poison-dart frogs

    Márquez, R., Linderoth, T. P., Mejia-Vargas, D., Nielsen, Rasmus, Amezquita, A. & Kronforst, M. R., 2020, In: Molecular Ecology. 29, 19, p. 3702-3719 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Inferring the ancestry of parents and grandparents from genetic data

    Pei, J., Zhang, Y., Nielsen, Rasmus & Wu, Y., 2020, In: PLOS Computational Biology. 16, 8, 22 p., 1008065.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Massive haplotypes underlie ecotypic differentiation in sunflowers

    Todesco, M., Owens, G. L., Bercovich, N., Légaré, J. S., Soudi, S., Burge, D. O., Huang, K., Ostevik, K. L., Drummond, E. B. M., Imerovski, I., Lande, K., Pascual-Robles, M. A., Nanavati, M., Jahani, M., Cheung, W., Staton, S. E., Muños, S., Nielsen, R., Donovan, L. A., Burke, J. M. & 2 others, Yeaman, S. & Rieseberg, L. H., 2020, In: Nature. 584, 7822, p. 602-607 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    No statistical evidence for an effect of CCR5-∆32 on lifespan in the UK Biobank cohort

    Maier, R., Akbari, A., Wei, X., Patterson, N., Nielsen, Rasmus & Reich, D., 2020, In: Nature Medicine. 26, 2, p. 178-180 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    On the Distribution of Tract Lengths During Adaptive Introgression

    Shchur, V., Svedberg, J., Medina, P., Corbett-Detig, R. & Nielsen, Rasmus, 2020, In: G3: Genes, Genomes, Genetics (Bethesda). 10, 10, p. 3663-3673 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Phenotypic Convergence Is Not Mirrored at the Protein Level in a Lizard Adaptive Radiation

    Corbett-Detig, R. B., Russell, S. L., Nielsen, Rasmus & Losos, J., 2020, In: MOLECULAR BIOLOGY AND EVOLUTION . 37, 6, p. 1604-1614 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Population genomics of the Viking world: [incl. correction]

    Margaryan, A., Lawson, D. J., Sikora, M., Racimo, F., Rasmussen, S., Moltke, I., Cassidy, L. M., Jørsboe, E., Ingason, A., Pedersen, M. W., Korneliussen, T., Wilhelmson, H., Buś, M. M., de Barros Damgaard, P., Martiniano, R., Renaud, G., Bhérer, C., Moreno-Mayar, J. V., Fotakis, A. K., Allen, M. & 30 others, Allmäe, R., Molak, M., Cappellini, Enrico, Scorrano, Gabriele, McColl, Hugh, Buzhilova, A., Fox, A., Albrechtsen, Anders, Schütz, B., Skar, B., Arcini, C., Lundstrøm, I., Cheng, J., Stenderup, Jesper Tandberg, Iversen, K. H., Arge, S. V., Ellingvåg, S., Orlando, L., Pentz, P., Jessen, M. D., Pedersen, A., Jørkov, M L S, Lynnerup, Niels, Gilbert, M Thomas P, Allentoft, Morten Erik, Sindbæk, S. M., Kristiansen, K., Nielsen, Rasmus, Werge, Thomas & Willerslev, Eske, 2020, In: Nature. 585, 7825, p. 390-396 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Pronounced somatic bottleneck in mitochondrial DNA of human hair

    Barrett, A., Arbeithuber, B., Zaidi, A., Wilton, P., Paul, I. M., Nielsen, Rasmus & Makova, K. D., 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1790, 11 p., 20190175.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The genetic architecture of sporadic and multiple consecutive miscarriage

    Laisk, T., Soares, A. L. G., Ferreira, T., Painter, J. N., Censin, J. C., Laber, S., Bacelis, J., Chen, C. Y., Lepamets, M., Lin, K., Liu, S., Millwood, I. Y., Ramu, A., Southcombe, J., Andersen, M. S., Yang, L., Becker, C. M., Børglum, A. D., Gordon, S. D., Bybjerg-Grauholm, J. & 35 others, Helgeland, Ø., Hougaard, D. M., Jin, X., Johansson, S., Juodakis, J., Kartsonaki, C., Kukushkina, V., Lind, P. A., Metspalu, A., Montgomery, G. W., Morris, A. P., Mors, O., Mortensen, P. B., Njølstad, P. R., Nordentoft, Merete, Nyholt, D. R., Lippincott, M., Seminara, S., Salumets, A., Snieder, H., Zondervan, K., Werge, Thomas, Chen, Z., Conrad, D. F., Jacobsson, B., Li, L., Martin, N. G., Neale, B. M., Nielsen, Rasmus, Walters, R. G., Granne, I., Medland, S. E., Mägi, R., Lawlor, D. A. & Lindgren, C. M., 2020, In: Nature Communications. 11, 5980.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. 2019
  55. Published

    CCR5-Delta 32 is deleterious in the homozygous state in humans

    Wei, X. & Nielsen, Rasmus, Jun 2019, In: Nature Medicine. 25, 6, p. 909-910

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Genetic rescue and the maintenance of native ancestry

    Harris, K., Zhang, Y. & Nielsen, Rasmus, Feb 2019, In: Conservation Genetics. 20, 1, p. 59-64

    Research output: Contribution to journal › Journal article › Research › peer-review

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