Ole Winther

Ole Winther

Professor with special responsibilities


  1. 2022
  2. Published

    Calibrated uncertainty for molecular property prediction using ensembles of message passing neural networks

    Busk, J., Jørgensen, P. B., Bhowmik, A., Schmidt, M. N., Winther, Ole & Vegge, T., 2022, In: Machine Learning: Science and Technology. 3, 1, 12 p., 015012.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. E-pub ahead of print

    NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning

    Høie, Magnus Haraldson, Kiehl, E. N., Petersen, Bent, Nielsen, M., Winther, Ole, Nielsen, H., Hallgren, J. & Marcatili, P., 1 Jun 2022, (E-pub ahead of print) In: Nucleic Acids Research. 6 p., gkac439.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. E-pub ahead of print

    SignalP 6.0 predicts all five types of signal peptides using protein language models

    Teufel, Felix Georg, Almagro Armenteros, J. J., Johansen, A. R., Gíslason, M. H., Pihl, S. I., Tsirigos, Konstantinos, Winther, Ole, Brunak, Søren, von Heijne, G. & Nielsen, H., 2022, (E-pub ahead of print) In: Nature Biotechnology.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. E-pub ahead of print

    DeepLoc 2.0: multi-label subcellular localization prediction using protein language models

    Thumuluri, V., Almagro Armenteros, J. J., Johansen, A. R., Nielsen, H. & Winther, Ole, Apr 2022, (E-pub ahead of print) In: Nucleic Acids Research.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Interpretable autoencoders trained on single cell sequencing data can transfer directly to data from unseen tissues

    Walbech, J. S., Kinalis, S., Winther, Ole, Nielsen, Finn Cilius & Bagger, F. O., 2022, In: Cells. 11, 12 p., 85.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 171145930