Mads Nielsen

Mads Nielsen

Professor

ORCID: 0000-0003-1535-068X

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  1. Published

    A Computer-based Measure Using Normalized Heights Predicts Vertebral  Fracture Independent of BMD in Post-menopausal Women

    A. Ghosh, de Bruijne, Marleen, C. Pettersen, M. A. Karsdal, D. J. Leeming, C. Christiansen, P. & Nielsen, Mads, 2008, In: Journal of Bone and Mineral Research. suppl. S, p. S333 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  2. Published

    The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study

    Achterberg, H. C., Sørensen, L., Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, Mads & de Bruijne, Marleen, 2019, In: Neurobiology of Aging. 81, p. 58-66

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Markov random fields on triangle meshes

    Andersen, V., Aanæs, H., Bærentzen, J. A. & Nielsen, Mads, 2010, WSCG 2010: communication papers proceedings . Skala, V. (ed.). Vaclav Skala - Union Agency, p. 265-270 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  4. Published

    4D shape-preserving modelling of bone growth

    Andresen, P. R., Nielsen, Mads & Kreiborg, Sven, 1998, Medical Image Computing and Computer-Assisted Intervention - MICCAI’98: First International Conference Cambridge, MA, USA, October 11–13, 1998 Proceedings. Wells, W. M., Colchester, A. & Delp, S. (eds.). Springer, p. 710-719 10 p. (Lecture notes in computer science, Vol. 1496).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  5. Non-rigid registration by geometry-constrained diffusion

    Andresen, P. R. & Nielsen, Mads, 2001, In: Medical Image Analysis. 5, 2, p. 81-88 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Alzheimer's disease diagnostic performance of a multi-atlas hippocampal segmentation method using the harmonized hippocampal protocol

    Anker, C., Sørensen, L., Pai, A. S. U., Lyksborg, M., Lillholm, Martin, Conradsen, K., Larsen, R. & Nielsen, Mads, 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  7. Published

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, A. S. U., Sørensen, L., Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P33 1 p., IC-P-058.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  8. Published

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol

    Anker, C., Pai, A. S. U., Sørensen, L., Lyksborg, M., Conradsen, K., Larsen, R. & Nielsen, Mads, 2014, In: Alzheimer's & Dementia. 10, 4, Supplement, p. P415-P416 2 p., P1-288.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  9. Published

    A longitudinal follow-up of COPD disease progression in a large cohort of smokers screened for early lung cancer: CBQ study

    Ashraf, H., Edula, G., de Bruijne, Marleen, Nielsen, Mads, Dahlbäck, A. D. M. & Pedersen, J. H., 2009, In: American Journal of Respiratory and Critical Care Medicine. p. A1492 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  10. Published

    Abdominal aortic calcification quantified by the Morphological Atherosclerotic Calcification Distribution (MACD) index is associated with features of the metabolic syndrome

    Barascuk, N., Ganz, Melanie, Nielsen, Mads, Register, T. C., Rasmussen, L. M., A. Karsdal, M. & Christiansen, C., 2011, In: B M C Cardiovascular Disorders. 11, 9 p., 11.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    An anatomically oriented breast coordinate system for mammogram analysis

    Brandt, S., Karemore, G., Karssemeijer, N. & Nielsen, Mads, 2011, In: I E E E Transactions on Medical Imaging. 30, 10, p. 1841-1851 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Anatomy driven breast coordinate system for mammogram analysis

    Brandt, S. S., Karemore, G. R., Karssemeijer, N. & Nielsen, Mads, 2011. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  13. Published

    Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Bron, E. E., Smits, M., van der Flier, W. M., Vrenken, H., Barkhof, F., Scheltens, P., Papma, J. M., Steketee, R. M. E., Méndez Orellana, C., Meijboom, R., Pinto, M., Meireles, J. R., Garrett, C., Bastos-Leite, A. J., Abdulkadir, A., Ronneberger, O., Amoroso, N., Bellotti, R., Cárdenas-Peña, D., Álvarez-Meza, A. M. & 30 others, Dolph, C. V., Iftekharuddin, K. M., Eskildsen, S. F., Coupé, P., Fonov, V. S., Franke, K., Gaser, C., Ledig, C., Guerrero, R., Tong, T., Gray, K. R., Moradi, E., Tohka, J., Routier, A., Durrleman, S., Sarica, A., Di Fatta, G., Sensi, F., Chincarini, A., Smith, G. M., Stoyanov, Z. V., Sørensen, L. E. B. L., Nielsen, Mads, Tangaro, S., Inglese, P., Wachinger, C., Reuter, M., van Swieten, J. C., Niessen, W. J. & Klein, S., 2015, In: NeuroImage. 111, p. 562-579 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings

    Cardoso, M. J. (ed.), Arbel, T. (ed.), Ferrante, E. (ed.), Pennec, X. (ed.), Dalca, A. V., Parisot, S. (ed.), Joshi, S. (ed.), Batmanghelich, N. K. (ed.), Sotiras, A. (ed.), Nielsen, Mads (ed.), Sabuncu, M. R. (ed.), Fletcher, T. (ed.), Shen, L. (ed.), Durrleman, S. (ed.) & Sommer, Stefan Horst (ed.), 2017, Springer. 248 p. (Lecture notes in computer science, Vol. 10551).

    Research output: Book/Report › Anthology › Research › peer-review

  15. Published

    Towards exaggerated emphysema stereotypes

    Chen, C., Sørensen, L., Lauze, Francois Bernard, Igel, Christian, Loog, M., Feragen, A., de Bruijne, Marleen & Nielsen, Mads, 2012, Medical Imaging 2012: Computer-Aided Diagnosis. van Ginneken, B. & Novak, C. L. (eds.). SPIE - International Society for Optical Engineering, 13 p. 83150Q. (Proceedings of S P I E - International Society for Optical Engineering, Vol. 7964). (Progress in Biomedical Optics and Imaging; No. 31, Vol. 13).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  16. Published

    Novel classification using adaptive metric k-NN

    Chen, C., Chernoff, K., Karemore, G., Lo, P. C. P., Nielsen, Mads & Lauze, Francois Bernard, 2011. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  17. Published

    Breast tissue segmentation from x-ray radiographs

    Chen, C., Nielsen, Mads, Karssemeijer, N. & Brandt, S. S., 2014, In: Physics in Medicine and Biology. 59, 10, p. 2445-2456 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Towards exaggerated image stereotypes

    Chen, C., Lauze, Francois Bernard, Igel, Christian, Feragen, A., Loog, M. & Nielsen, Mads, 2011, Proceedings of The First Asian Conference on Pattern Recognition 2011, . p. 422-426 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  19. Published

    Classification in medical image analysis using adaptive metric k-NN

    Chen, C., Chernoff, K., Karemore, G., Lo, P. C. P., Nielsen, Mads & Lauze, Francois Bernard, 2010, Medical Imaging 2010: image processing. Dawant, B. M. & Haynor, D. R. (eds.). SPIE - International Society for Optical Engineering, 9 p. 76230S. (Progress in Biomedical Optics and Imaging; No. 33, Vol. 11).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  20. Published

    Weighting of the k-Nearest-Neighbors

    Chernoff, K. & Nielsen, Mads, 2010, 2010 20th International Conference on Pattern Recognition (ICPR). IEEE, p. 666-669 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  21. Published

    Metric learning by directly minimizing the k-NN training error

    Chernoff, K., Loog, M. & Nielsen, Mads, 2012, 2012 21st International Conference on Pattern Recognition (ICPR). IEEE, p. 1265-1268 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. Published

    Two dimensional shape representation manipulation method for improving general procrustes alignment process, involves relating probable relative depth of landmark in three dimensional shape of body part

    Chernoff, K., Nielsen, Mads & Lillholm, Martin, 2010, IPC No. G06T-007/00, Patent No. WO2010142595-A1, 16 Dec 2010, Priority date 11 Jun 2009, Priority No. US268370

    Research output: Patent

  23. Published

    Mammographic Texture Resemblance generalizes as an independent risk factor of breast cancer

    Chernoff, K., Christopher, S. G., Karemore, G., Karssemeijer, N., Nielsen, Mads & Vachon, C. M., 2011.

    Research output: Contribution to conference › Conference abstract for conference › Research

  24. Published

    Morphological Atherosclerosis Calcification Distribution (MACD) Index is a Strong Predictor of Cardio-Vascular Death and Include Predictive Power of BMD

    Christiansen, C., Karsdal, M., Ganz, Melanie, Dam, E. & Nielsen, Mads, 2008. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  25. Published

    Automated Quantification of the Morphological Atherosclerotic Calcification Distribution on X-Rays Is a Strong Predictor of Mortality in Postmenopausal Women

    Christiansen, C., Karsdal, M., Lauze, Francois Bernard, Dam, E., Ganz, Melanie, de Bruijne, Marleen, Sørensen, M., Barascuk, N. & Nielsen, Mads, 2008, In: Arteriosclerosis, Thrombosis, and Vascular Biology. 6, p. e48-e48 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  26. Quantizing calcification in the lumbar aorta on 2-D lateral X-ray images

    Conrad-Hansen, L. A., de Bruijne, M., Lauze, F., Tanko, L. B. & Nielsen, Mads, 2005, Computer Vision for Biomedical Image Applications. Springer Science+Business Media, p. 409-418 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  27. A pixelwise inpainting-based refinement scheme for quantizing calcification in the lumbar aorta on 2D lateral x-ray images

    Conrad-Hansen, L. A., de Bruijne, M., Lauze, F., Tanko, L. B. & Nielsen, Mads, 2006, Medical Imaging. p. 61441F-61441F

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  28. Published

    Method of deriving a quantitative measure of a degree of calcification of an aorta

    Conrad-Hansen, L. A., De Bruijne, M., Lauze, F. B., Christiansen, C. & Nielsen, Mads, 1 Jul 2009, Google Patents.

    Research output: Other contribution › Research

  29. Prediction of the location of the lumbar aorta using the first four lumbar vertebrae as a predictor

    Conrad-Hansen, L. A., Raundahl, J., Tankó, L. B. & Nielsen, Mads, 2004.

    Research output: Contribution to conference › Poster › Research

  30. Published

    Quantifying calcification in the lumbar aorta on X-ray images

    Conrad-Hansen, L. A., de Bruijne, Marleen, Lauze, F. B., Tankó, L. B., Pettersen, P. C., He, Q., Chen, J., Christiansen, C. & Nielsen, Mads, 2007, Medical Image Computing and Computer-Assisted Intervention: 10th International conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part II. Ayache, N., Ourselin, S. & Maeder, A. (eds.). Springer, p. 352-359 (Lecture notes in computer science; No. 4792).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  31. Published

    Semi-automatic detection of calcifications using nonlinear stretching on X-ray images

    Conrad-Hansen, L. A., de Bruijne, Marleen, Nielsen, Mads & Petrou, M., 2007, Medical Imaging 2007: Computer-aided diagnosis, 20-22 February, 2007, San Diego, California, USA. Giger, M. L. & Karssemeijer, N. (eds.). SPIE, 7 p. (Proceedings of SPIE; No. 6514).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  32. Published

    Maximum a posteriori estimation of linear shape variation with application to vertebra and cartilage modeling

    Crimi, A., Lillholm, Martin, Nielsen, Mads, Ghosh, A., de Bruijne, Marleen, Dam, E. B. & Sporring, Jon, 2011, In: IEEE Transactions on Medical Imaging. 30, 8, p. 1514-1526 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Prior knowledge regularization in statistical medical image tasks

    Crimi, A., Sporring, Jon, de Bruijne, Marleen, Lillholm, Martin & Nielsen, Mads, 2009, Proceedings of the MICCAI Workshop on Probabilistic Models for Medical Image Analysis. 12 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  34. Published

    Bayes estimation of shape model with application to vertebrae boundaries

    Crimi, A., Ghosh, A., Sporring, Jon & Nielsen, Mads, 2009, Medical Imaging 2009: Image Processing (Proceedings Volume). Vol. 7259. 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  35. Published

    Shape-based assessment of vertebral fracture risk in postmenopausal women using discriminative shape alignment

    Crimi, A., Loog, M., de Bruijne, Marleen, Nielsen, Mads & Lillholm, Martin, 2012, In: Academic Radiology. 19, 4, p. 446-454 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Field of Particle Filters Image Inpainting

    Cuzol, A., Steenstrup Pedersen, Kim & Nielsen, Mads, 2008, In: Journal of Mathematical Imaging and Vision. 31, 2-3, p. 147-156 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Non-linear diffusion for interactive multi-scale watershed segmentation

    Dam, E. & Nielsen, Mads, 2000, Medical Image Computing and Computer-Assisted Intervention--MICCAI 2000. Springer Science+Business Media, p. 216-225 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  38. Published

    Fully automatic cartilage morphometry for knee MRI from the OAI

    Dam, E., Marques, J., Zaim, S., Fuerst, T., Genant, H., Lillholm, Martin & Nielsen, Mads, 2012. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  39. Exploring Non-linear Difusion: The Difusion Echo

    Dam, E. & Nielsen, Mads, 2006, In: Scale-Space and Morphology in Computer Vision: Third International Conference, Scale-Space 2001 Vancouver, Canada, July 7--8, 2001 Proceedings. p. 264-272 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Cartilage curvature

    Dam, E. B., Folkesson, J., Petterson, P., Olsen, O. F., Nielsen, Mads & Christiansen, C., 1 Sep 2006

    Research output: Patent

  41. Published

    Prognostic osteoarthritis biomarkers

    Dam, E. B., Loog, M., Karsdal, M., Nielsen, Mads & Christiansen, C., 1 May 2009, Google Patents.

    Research output: Other contribution › Research

  42. Published

    Three-dimensional scan data analysis method for diagnosis of joint pathology, involves determining measure of three-dimensional local curvature within load bearing area of cartilage, at scale arranged to result in specific measure

    Dam, E. B., Folkesson, J. M., Pettersen, P., Olsen, O. F., Nielsen, Mads & Christiansen, C., 2007, IPC No. G06T-007/00, Patent No. WO2007048463-A1, 3 May 2007, Priority date 24 Oct 2005, Priority No. GB021640

    Research output: Patent

  43. Approximating Non-linear Diffusion

    Dam, E. B., Olsen, O. F. & Nielsen, Mads, 2003, Scale Space Methods in Computer Vision: 4th International Conference, Scale Space 2003 Isle of Skye, UK, June 10–12, 2003 Proceedings. <Forlag uden navn>, p. 117-131 (Lecture notes in computer science, Vol. 2695/2003).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  44. Published

    Three dimensional image data analysis method for diagnosis and prognosis of e.g. osteoarthritis, involves comparing measured value representative of homogeneity of medial area with previously obtained values of healthy joints

    Dam, E. B., Qazi, A. A., Karsdal, M., Petterson, P. C., Nielsen, Mads & Christiansen, C., 2008, IPC No. G06T-007/00, Patent No. WO2008034845-A2 , 27 Mar 2008, Priority date 19 Sep 2006, Priority No. GB018417

    Research output: Patent

  45. Published

    Method for identifying region of interest (ROI) in human organ for performing e.g. knee cartilage quantification, involves calculating weight of feature of image in map for minimizing sample size needed to discriminate between groups

    Dam, E. B., Nielsen, Mads, Qazi, A. A., Lillholm, Martin & Jørgensen, D. R., 2010, IPC No. G06K-009/00, Patent No. US2010232671-A1, 16 Sep 2010, Priority date 17 Dec 2008, Priority No. US203094P

    Research output: Patent

  46. Published

    Identification of progressors in osteoarthritis by combining biochemical and MRI based markers.

    Dam, Erik Bjørnager, Loog, M., Christiansen, C., Byrjalsen, I., Folkesson, J. M., Nielsen, Mads, Qazi, A. A., Pettersen, P., Garnero, P. & Karsdal, M. A., 24 Jul 2009, In: Arthritis Research & Therapy. 11, 4, p. 1-11

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Automatic segmentation of high-and low-field knee MRIs using knee image quantification with data from the osteoarthritis initiative

    Dam, Erik Bjørnager, Lillholm, Martin, Marques, J. & Nielsen, Mads, 2015, In: SPIE Journal of Medical Imaging. 2, 2, 13 p., 024001.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Multi-object segmentation using shape particles

    De Bruijne, M. & Nielsen, Mads, 2005, Multi-object segmentation using shape particles. p. 59-127 69 p. (Information Processing in Medical Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  49. Shape particle filtering for image segmentation

    De Bruijne, M. & Nielsen, Mads, 2004, In: Medical Image Computing and Computer-Assisted Intervention--MICCAI 2004. p. 168-175 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Quantitative vertebral morphometry using neighbor-conditional shape models

    De Bruijne, M., Lund, M. T., Tankó, L. B., Pettersen, P. P. & Nielsen, Mads, 2006, Medical Image Computing and Computer-Assisted Intervention--MICCAI 2006. Springer Science+Business Media, p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

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