Leise Riber

Leise Riber

Associate Professor


Publication year:
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1 - 53 out of 53Page size: 500
  1. 2023
  2. Published

    Detection of nucleotide modifications in bacteria and bacteriophages: Strengths and limitations of current technologies and software

    Nielsen, Tue Kjærgaard, Forero Junco, Laura Milena, Kot, Witold, Moineau, S., Hansen, Lars Hestbjerg & Riber, Leise, 2023, In: Molecular Ecology. 32, 6, p. 1236-1247 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Epigenetic effects of short-chain fatty acids from the large intestine on host cells

    Stein, R. A. & Riber, Leise, 2023, In: microLife. 4, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Pheno- and Genotyping of Three Novel Bacteriophage Genera That Target a Wheat Phyllosphere Sphingomonas Genus

    Riber, Leise, Carstens, Alexander Byth, Dougherty, Peter Erdmann, Roy, Chayan, Willenbücher, K., Hille, F., Franz, C. M. A. P. & Hansen, Lars Hestbjerg, 2023, In: Microorganisms. 11, 7, 17 p., 1831.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Widespread and largely unknown prophage activity, diversity, and function in two genera of wheat phyllosphere bacteria

    Dougherty, Peter Erdmann, Nielsen, Tue Kjærgaard, Riber, Leise, Lading, H. H., Forero Junco, Laura Milena, Kot, Witold, Raaijmakers, J. M. & Hansen, Lars Hestbjerg, 2023, In: ISME Journal. 17, 12, p. 2415-2425

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. 2021
  7. Published

    An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms

    Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Bacterial Chromosomes Under Changing Environmental Conditions: Editorial

    Glinkowska, M., Waldminghaus, T. & Riber, Leise, 2021, In: Frontiers in Microbiology. 12, 3 p., 633466.

    Research output: Contribution to journal › Editorial › Research

  9. Published

    Epigenetic Memories: The Hidden Drivers of Bacterial Persistence?

    Riber, Leise & Hansen, Lars Hestbjerg, 2021, In: Trends in Microbiology. 29, 3, p. 190-194 5 p.

    Research output: Contribution to journal › Editorial › Research

  10. Published

    Extension of Plant Phenotypes by the Foliar Microbiome

    Hawkes, C. V., Kjøller, Rasmus, Raaijmakers, J. M., Riber, Leise, Christensen, Svend, Rasmussen, Simon, Christensen, Jan H., Dahl, A. B., Westergaard, Jesper Cairo, Nielsen, Mads, Brown-Guedira, G. & Hansen, Lars Hestbjerg, 2021, In: Annual Review of Plant Biology. 72, p. 823-846 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. 2020
  12. Published

    A converging subset of soil bacterial taxa is permissive to the IncP-1 plasmid pKJK5 across a range of soil copper contamination

    Song, J., Klümper, U., Riber, Leise, Dechesne, A., Smets, B. F., Sørensen, Søren Johannes & Brandt, Kristian Koefoed, 2020, In: FEMS Microbiology Ecology. 96, 11, 10 p., fiaa200.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Bacterial Chromosome Replication and DNA Repair During the Stringent Response

    Sinha, A. K., Løbner-Olesen, Anders & Riber, Leise, 2020, In: Frontiers in Microbiology. 11, 9 p., 582113.

    Research output: Contribution to journal › Review › Research › peer-review

  14. Published

    Inhibition of Escherichia coli chromosome replication by rifampicin treatment or during the stringent response is overcome by de novo DnaA protein synthesis

    Riber, Leise & Løbner-Olesen, Anders, 2020, In: Molecular Microbiology. 114, 6, p. 906-919

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Selection and propagation of IncP conjugative plasmids following long-term anthropogenic metal pollution in river sediments

    Cyriaque, V., Jacquiod, S. J. A., Riber, Leise, Abu Al-Soud, W., Gillan, D. C., Sørensen, Søren Johannes & Wattiez, R., 2020, In: Journal of Hazardous Materials. 382, 10 p., 121173.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. 2018
  17. Published

    HipA-Mediated Phosphorylation of SeqA Does not Affect Replication Initiation in Escherichia coli

    Riber, Leise, Koch, B. M., Kruse, L. R., Germain, E. & Løbner-Olesen, Anders, 2 Nov 2018, In: Frontiers in Microbiology. 9, p. 1-9 2637.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Long-term industrial metal contamination unexpectedly shaped diversity and activity response of sediment microbiome

    Jacquiod, S. J. A., Cyriaque, V., Riber, Leise, Al-Soud, W. A., Gillan, D. C., Wattiez, R. & Sørensen, Søren Johannes, 15 Feb 2018, In: Journal of Hazardous Materials. 344, p. 299-307 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A Robust Proton Flux (pHlux) Assay for Studying the Function and Inhibition of the Influenza A M2 Proton Channel

    Santner, P., Martins, J. M. D. S., Laursen, J. S., Behrendt, L., Riber, Leise, Olsen, Christian Adam, Arkin, I. T., Winther, Jakob R., Willemoës, Martin & Lindorff-Larsen, Kresten, 2018, In: Biochemistry. 57, 41, p. 5949-5956

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    An intriguing relationship between the cyclic diguanylate signaling system and horizontal gene transfer

    Madsen, Jonas Stenløkke, Hylling, Ole, Jacquiod, S. J. A., Pécastaings, S., Hansen, L. H., Riber, Leise, Vestergaard, G. A. & Sørensen, Søren Johannes, 2018, In: ISME Journal. 12, 9, p. 2330-2334 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Countermeasures to survive excessive chromosome replication in Escherichia coli

    Charbon, Godefroid, Riber, Leise & Løbner-Olesen, Anders, 2018, In: Current Genetics. 64, 1, p. 71-79 9 p.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Fluorescence recovery allows theimplementation of a fluorescence reporter gene platform applicable for the detection and quantification of horizontal gene transfer in anoxic environments

    Pinilla Redondo, Rafael, Riber, Leise & Sørensen, Søren Johannes, 2018, In: Applied and Environmental Microbiology. 84, 6, 9 p., e02507-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Monitoring plasmid-mediated horizontal gene transfer in microbiomes: recent advances and future perspectives

    Pinilla Redondo, Rafael, Cyriaque, V., Jacquiod, S., Sørensen, Søren Johannes & Riber, Leise, 2018, In: Plasmid. 99, p. 56-67

    Research output: Contribution to journal › Review › Research › peer-review

  24. 2017
  25. Published

    Response of the bacterial community in an on-farm biopurification system, to which diverse pesticides are introduced over an agricultural season

    Holmsgaard, P. N., Dealtry, S., Dunon, V., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Smalla, K., Riber, Leise & Sørensen, Søren Johannes, Oct 2017, In: Environmental Pollution. 229, p. 854-862 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Deciphering conjugative plasmid permissiveness in wastewater microbiomes

    Jacquiod, S. J. A., Brejnrod, A. D., Milani, S. M., Abu Al-Soud, W., Sørensen, Søren Johannes & Riber, Leise, Jul 2017, In: Molecular Ecology. 26, 13, p. 3556-3571 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Metal stressors consistently modulate bacterial conjugal plasmid uptake potential in a phylogenetically conserved manner

    Klümper, U., Dechesne, A., Riber, Leise, Brandt, Kristian Koefoed, Gülay, A., Sørensen, Søren Johannes & Smets, B. F., 2017, In: The ISME Journal. 11, 1, p. 152-165 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. 2016
  29. Published

    Diverse gene functions in a soil mobilome

    Luo, W., Xu, Z., Riber, Leise, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Soil Biology & Biochemistry. 101, p. 175-183 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Enhanced plasmid loss in bacterial populations exposed to the antimicrobial compound irgasan delivered from interpenetrating polymer network silicone hydrogels

    Riber, Leise, Burmølle, Mette, Alm, M., Milani, S. M., Thomsen, P., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: Plasmid. 87-88, p. 72-78 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Multiple DNA binding proteins contribute to timing of chromosome replication in E. coli

    Riber, Leise, Frimodt-Møller, Jakob, Charbon, Godefroid & Løbner-Olesen, Anders, 2016, In: Frontiers in Molecular Biosciences. 3, 9 p., 29.

    Research output: Contribution to journal › Review › Research › peer-review

  32. Published

    Type 3 fimbriae encoded on plasmids are expressed from a unique promoter without affecting host motility, facilitating an exceptional phenotype that enhances conjugal plasmid transfer

    Madsen, Jonas Stenløkke, Riber, Leise, Kot, Witold, Basfeld, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2016, In: P L o S One. 11, 9, 19 p., e0162390.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. 2015
  34. Published

    Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community

    Klümper, U., Riber, Leise, Dechesne, A., Sannazzaro, A. I., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Smets, B. F., 2015, In: I S M E Journal. 9, p. 934-945 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Phenotypic variability in bioprocessing conditions can be tracked on the basis of on-line flow cytometry and fits to a scaling law

    Baert, J., Kinet, R., Brognaux, A., Delepierre, A., Telek, S., Sørensen, Søren Johannes, Riber, Leise, Fickers, P. & Delvigne, F., 2015, In: Biotechnology Journal. 10, 8, p. 1316-1325 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. 2014
  37. Published

    An improved method for including upper size range plasmids in metamobilomes

    Norman, A., Riber, Leise, Luo, W., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2014, In: PLoS ONE. 9, 8, 12 p., e104405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance

    Riber, Leise, Poulsen, P. H. B., Abu Al-Soud, W., Hansen, L. B. S., Bergmark, L., Brejnrod, A. D., Norman, A., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 206-224 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. 2013
  40. Published

    Complete genome sequence of the cystic fibrosis pathogen Achromobacter xylosoxidans NH44784-1996 complies with important pathogenic phenotypes

    Jakobsen, T. H., Hansen, M. A., Jensen, P. Ø., Hansen, L., Riber, L., Cockburn, A. P. I., Kolpen, M., Hansen, C. R., Ridderberg, W., Eickhardt-Sørensen, S. R., Hansen, M., Kerpedjiev, P., Alhede, M., Qvortrup, K., Burmølle, M., Moser, C. E., Kühl, M., Ciofu, O., Givskov, M., Sørensen, S. J. & 2 others, Høiby, Niels & Bjarnsholt, Thomas, 2013, In: P L o S One. 8, 7, 17 p., e68484.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Investigating the diversity of Pseudomonas spp. in soil using culture dependent and independent techniques

    Li, L., Abu Al-Soud, W., Bergmark, L., Riber, Leise, Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2013, In: Current Microbiology. 67, 4, p. 423-430 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. 2012
  43. Published

    Design and synthesis of a functional self-replicating, broad host range cloning vector from bits and bytes

    Riber, Leise, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012.

    Research output: Contribution to conference › Poster › Research

  44. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid stability

    Riber, Leise, Burmølle, Mette, Milani, S. M., Alm, M., Thomsen, P., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  45. Published

    When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility

    Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  46. 2011

  47. Attachment of Salmonella spp. to pork meat

    Hansen, T., Riber, Leise, Lofstrom, C. & Hoorfar, J., 2011.

    Research output: Contribution to conference › Poster › Research

  48. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research › peer-review

  49. Microarray-based genotyping of Salmonella: inter-laboratory evaluation of reproducibility and standardization potential

    Gronlund, H., Riber, Leise, Vigre, H., Lofstrom, C., Folling, L., Huehn, S., Malorny, B., Radstrom, P., Rudi, K. & Hoorfar, J., 2011, In: International Journal of Food Microbiology. 145, 1, p. S79-S85 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Suppressors of DnaAATP imposed overinitiation in Escherichia coli

    Charbon, G., Riber, Leise, Cohen, M., Skovgaard, O., Fujimitsu, K., Katayama, T. & Løbner-Olesen, Anders, 2011, In: Molecular Microbiology. 79, 4, p. 914-928 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. 2010
  52. Published

    Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  53. Characterization of hda suppressor mutants (hsm’s)

    Bjørn, L., Charbon, G., Skovgaard, O., Riber, Leise & Olesen, A. L., 2010.

    Research output: Contribution to conference › Poster › Research

  54. Genomic rearrangements and mutations identified by next generation sequencing

    Skovgaard, O., Bak, M., Bjørn, L., Charbon, G., Riber, Leise & Olesen, A. L., 2010.

    Research output: Contribution to conference › Poster › Research

  55. SeqA contributes to control the amount of DnaA molecules available for initiation of replication

    Charbon, G., Riber, Leise, Bjørn, L., Skovgaard, O. & Olesen, A. L., 2010.

    Research output: Contribution to conference › Poster › Research

  56. Towards standardization of microarray-based genotyping of Salmonella

    Lofstrom, C., Grønlund, H., Riber, Leise, Vigre, H., Folling, L., Huehn, S., Malorny, B., Rådstrom, P., Rudi, K. & Hoorfar, J., 2010.

    Research output: Contribution to conference › Poster › Research

  57. 2009

  58. Loss of Hda activity stimulates replication initiation from I-box, but not R4 mutant origins in Escherichia coli

    Riber, Leise, Fujimitsu, K., Katayama, T. & Løbner-Olesen, Anders, 2009, In: Molecular Microbiology. 71, 1, p. 107-122

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Salmonella genes involved in attachment on carcass surface and pork meat contamination

    Riber, Leise, Lofstrom, C. & Hoorfar, J., 2009.

    Research output: Contribution to conference › Poster › Research

  60. 2008

  61. Genome rearrangements in E. coli identified by HTP sequencing

    Skovgaard, O., Bak, M., Riber, Leise, Olesen, A. L. & Tommerup, N., 2008.

    Research output: Contribution to conference › Poster › Research

  62. Salmonella genes involved in attachment on carcass surface and pork meat contamination

    Riber, Leise & Hoorfar, J., 2008.

    Research output: Contribution to conference › Poster › Research

  63. 2006

  64. Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome

    Riber, Leise, Olsson, J. A., Jensen, R. B., Skovgaard, O., Dasgupta, S., Marinus, M. G. & Løbner-Olesen, Anders, 2006, In: Genes & Development. 20, 15, p. 2121-2134

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. RIDA and autoregulation of the dnaA gene act in concert to ensure timely initiation of replication in Escherichia coli

    Riber, Leise, Olsson, J., Jensen, R. B., Skovgaard, O., Dasgupta, S., Marinus, M. & Olesen, A. L., 2006.

    Research output: Contribution to conference › Poster › Research

  66. 2005

  67. Coordinated replication and sequestration of oriC and dnaA are required for maintaining controlled once-per-cell-cycle initiation in Escherichia coli

    Riber, Leise & Løbner-Olesen, Anders, 1 Aug 2005, In: Journal of Bacteriology. 187, 16, p. 5605-5613 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Post initiation control of chromosome replication in E. coli

    Riber, Leise & Olesen, A. L., 2005.

    Research output: Contribution to conference › Poster › Research

  69. 2004

  70. Limiting DNA replication in E. coli to once and only once per cell cycle

    Riber, Leise & Olesen, A. L., 2004.

    Research output: Contribution to conference › Poster › Research

ID: 17515397