Lars Juhl Jensen

Lars Juhl Jensen

Professor, Group Leader, Professor

Member of:

    ORCID: 0000-0001-7885-715X

    Publication year:
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    101 - 125 out of 237Page size: 25
    1. 2012
    2. Published

      eggNOG v3.0: Orthologous groups covering 1133 organisms at 41 different taxonomic ranges

      Powell, S., Trachana, K., Letunic, I., Doerks, T., Bork, P., Szklarczyk, D., Jensen, Lars Juhl, Roth, A., Von Mering, C., Kuhn, M., Muller, J., Arnold, R. & Rattei, T., 2012, In: Nucleic Acids Research. 40, D1, p. D284-9

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Using text-mining techniques in electronic patient records to identify ADRs from medicine use

      Warrer, P., Hansen, E. H., Jensen, Lars Juhl & Aagaard, L., May 2012, In: British Journal of Clinical Pharmacology. 73, 5, p. 674-684 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. 2013
    5. Published

      Reply to 'Mining electronic health records: An additional perspective'

      Jensen, P. B., Jensen, Lars Juhl & Brunak, Søren, 1 Jan 2013, In: Nature Reviews. Genetics. 14, 1 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    6. Published

      STRING v9.1: Protein-protein interaction networks, with increased coverage and integration

      Franceschini, A., Simonovic, M., Roth, A., Von Mering, C., Szklarczyk, D., Pletscher-Frankild, S., Jensen, Lars Juhl, Kuhn, M. M., Lin, J., Minguez, P. & Bork, P., 1 Jan 2013, In: Nucleic Acids Research. 41, D1, p. D808-D815 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Systematic identification of proteins that elicit drug side effects

      Kuhn, M., Al Banchaabouchi, M., Campillos, M., Jensen, Lars Juhl, Gross, C., Gavin, A. & Bork, P., 30 Apr 2013, In: Molecular Systems Biology. 9, p. 663 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Dictionary construction and identification of possible adverse drug events in Danish clinical narrative text

      Eriksson, R., Jensen, P. B., Pletscher-Frankild, S., Jensen, Lars Juhl & Brunak, Søren, 23 May 2013, In: JAMIA - Journal of the American Medical Informatics Association. 20, 5, p. 947-953 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      In Vivo Phosphoproteomics Analysis Reveals the Cardiac Targets of β-Adrenergic Receptor Signaling

      Lundby, Alicia, Andersen, M. N., Steffensen, Annette Buur, Horn, H., Kelstrup, C. D., Francavilla, C., Jensen, Lars Juhl, Schmitt, Nicole, Thomsen, Morten Bækgaard & Olsen, Jesper Velgaard, 4 Jun 2013, In: Science Signaling. 6, 278, p. rs11 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

      Pafilis, E., Pletscher-Frankild, S., Fanini, L., Faulwetter, S., Pavloudi, C., Vasileiadou, A., Arvanitidis, C. & Jensen, Lars Juhl, 18 Jun 2013, In: PloS one. 8, 6, p. e65390

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

      Orlando, L. A. A., Ginolhac, A., Zhang, G., Froese, D., Albrechtsen, A., Stiller, M., Schubert, M., Cappellini, E., Petersen, B., Moltke, I., Johnson, P. L. F., Fumagalli, M., Mouatt, J. T. V., Raghavan, M., Korneliussen, T. S., Malaspinas, A. S., Vogt, J., Szklarczyk, D. M., Kelstrup, C., Vinther, J. & 36 others, Dolocan, A., Stenderup, Jesper Tandberg, Velazquez, A. M. V., Cahill, J., Rasmussen, M., Wang, X., Min, J., Zazula, G. D., Seguin-Orlando, A., Mortensen, C., Magnussen, K., Thompson, J. F., Weinstock, J., Gregersen, K., Røed, K. H., Eisenmann, V., Rubin, C. J., Miller, D. C., Antczak, D. F., Bertelsen, M. F., Brunak, S., Al-Rasheid, K. A. S., Ryder, O., Andersson, L., Mundy, J., Krogh, Anders, Gilbert, M Thomas P, Kjær, Kurt H., Sicheritz-Pontén, T., Jensen, Lars Juhl, Olsen, Jesper Velgaard, Hofreiter, M., Nielsen, R., Shapiro, B., Wang, J. & Willerslev, Eske, 4 Jul 2013, In: Nature. 499, 7456, p. 74-78 5 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    12. Published

      TIMP-1 increases expression and phosphorylation of proteins associated with drug resistance in breast cancer cells

      Hekmat, O., Munk, S., Fogh, L., Yadav, R., Francavilla, C., Horn, H., Würtz, S. Ø., Schrohl, A-S., Damsgaard, B., Romer, M. U., Belling, K., Jensen, N. F., Gromova, I., Bekker-Jensen, D. B., Moreira, J., Jensen, L. J., Gupta, R., Lademann, U. A., Brünner, N., Olsen, J. V. & 1 others, Stenvang, Jan, 5 Aug 2013, In: Journal of Proteome Research. 12, 9, p. 4136-4151 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      A nondegenerate code of deleterious variants in mendelian Loci contributes to complex disease risk

      Blair, D. R., Lyttle, C. S., Mortensen, J. M., Bearden, C. F., Jensen, A. B., Khiabanian, H., Melamed, R., Rabadan, R., Bernstam, E. V., Brunak, Søren, Jensen, Lars Juhl, Nicolae, D., Shah, N. H., Grossman, R. L., Cox, N. J., White, K. P. & Rzhetsky, A., 26 Sep 2013, In: Cell. 155, 1, p. 70-80 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Are graph databases ready for bioinformatics?

      Have, C. T. & Jensen, Lars Juhl, 21 Oct 2013, In: Bioinformatics (Online). 2 p.

      Research output: Contribution to journal › Editorial › Research

    15. Published

      STITCH 4: integration of protein-chemical interactions with user data

      Kuhn, M., Szklarczyk, D. M., Pletscher-Frankild, S., Blicher, T. H., von Mering, C., Jensen, Lars Juhl & Bork, P., 28 Nov 2013, In: Nucleic Acids Research. 42, D1, p. D401-D407 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      eggNOG v4.0: nested orthology inference across 3686 organisms

      Powell, S., Forslund, K., Szklarczyk, D. M., Trachana, K., Roth, A., Huerta-Cepas, J., Gabaldón, T., Rattei, T., Creevey, C., Kuhn, M., Jensen, Lars Juhl, von Mering, C. & Bork, P., 1 Dec 2013, In: Nucleic Acids Research. 42, D1, p. D231-D239 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. 2014
    18. Published

      A comparison of protein kinases inhibitor screening methods using both enzymatic activity and binding affinity determination

      Rudolf, A. F., Skovgaard, T., Knapp, S., Jensen, Lars Juhl & Berthelsen, J., 2014, In: PloS one. 9, 6, p. 1-5 6 p., e98800.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      COMPARTMENTS: unification and visualization of protein subcellular localization evidence

      Binder, J. X., Pletscher-Frankild, S., Tsafou, K., Stolte, C., O'Donoghue, S. I., Schneider, R. & Jensen, Lars Juhl, 2014, In: Database: The Journal of Biological Databases and Curation. 2014, 9 p., bau012.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Discrepancies in listed adverse drug reactions in pharmaceutical product information supplied by the regulatory authorities in Denmark and the USA

      Eriksson, R., Aagaard, L., Jensen, Lars Juhl, Borisova, L., Hørlück, D., Brunak, Søren & Hansen, E. H., 2014, In: Pharmacology Research & Perspectives. 2, 3, p. 1-10 e00038.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Predicting Kinase Activity in Angiotensin Receptor Phosphoproteomes Based on Sequence-Motifs and Interactions

      Bøgebo, R., Horn, H., Olsen, Jesper Velgaard, Gammeltoft, S., Jensen, Lars Juhl, Hansen, J. L. & Christensen, G. L., 2014, In: PLOS ONE. 9, 4, p. 1-9 9 p., e94672.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Protein-driven inference of miRNA-disease associations

      Mørk, S., Pletscher-Frankild, S., Palleja, A., Gorodkin, Jan & Jensen, Lars Juhl, 2014, In: Bioinformatics (Oxford, England). 30, 3, p. 392-397 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Proteomic analysis of arginine methylation sites in human cells reveals dynamic regulation during transcriptional arrest

      Sylvestersen, K. B., Horn, H., Jungmichel, S., Jensen, Lars Juhl & Nielsen, Michael Lund, 21 Feb 2014, In: Molecular & Cellular Proteomics. 13, p. 2072-2088 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      DoReMi: context-based prioritization of linear motif matches

      Horn, H., Haslam, N. & Jensen, Lars Juhl, 20 Mar 2014, In: PeerJ. 2, 10 p., e315.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Dose-specific adverse drug reaction identification in electronic patient records: temporal data mining in an inpatient psychiatric population

      Eriksson, R., Werge, T., Jensen, Lars Juhl & Brunak, Søren, Apr 2014, In: Drug Safety. 37, 4, p. 237-47 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Erratum to: Dose-Specific Adverse Drug Reaction Identification in Electronic Patient Records: Temporal Data Mining in an Inpatient Psychiatric Population

      Eriksson, R., Werge, T., Jensen, Lars Juhl & Brunak, Søren, May 2014, In: Drug Safety. 37, 5, p. 379

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. Published

      KinomeXplorer: an integrated platform for kinome biology studies

      Horn, H., Schoof, E. M., Kim, J., Robin, X., Miller, M. L., Diella, F., Palma, A., Cesareni, G., Jensen, Lars Juhl & Linding, R., 29 May 2014, In: Nature Methods. 11, 6, p. 603-4 2 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      Temporal disease trajectories condensed from population-wide registry data covering 6.2 million patients

      Jensen, A. B., Moseley, P. L., Oprea, T. I., Ellesøe, S. G., Eriksson, R., Schmock, H., Jensen, P. B., Jensen, Lars Juhl & Brunak, Søren, 24 Jun 2014, In: Nature Communications. 5, 10 p., 4022.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 9931112